RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	LYZ	P61626	148 aa		7.8	□□□□□ -1.16
PAX6-256	ENST00000639394	NREP	Q16612	68 aa		7.8	□□□□□ -1.16
PAX6-256	ENST00000639394	TMEM167A	Q8TBQ9	72 aa		7.8	□□□□□ -1.16
PAX6-256	ENST00000639394	LIMD2	Q9BT23	127 aa		7.8	□□□□□ -1.16
PAX6-256	ENST00000639394	ZFAND3	Q9H8U3	227 aa		7.8	□□□□□ -1.16
PAX6-256	ENST00000639394	IGHV1-18	A0A0C4DH31	117 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	PSPHP1	O15172	72 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	ITPR1	Q14643	2758 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	LINC01554	Q52M75	96 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394		Q6ZSV7	163 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	ACACB	O00763	2458 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	ATRX	P46100	2492 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	RTTN	Q86VV8	2226 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	IGHV4OR15-8	A0A075B7B6	117 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394		A0A087WW49	117 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	TRAV10	A0A0B4J240	114 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	GNRH2	O43555	120 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	CTSG	P08311	255 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	ORMDL1	Q9P0S3	153 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	KIF25-AS1	Q9Y6Z4	181 aa		7.79	□□□□□ -1.16
PAX6-256	ENST00000639394	MAP1B	P46821	2468 aa	Known RBP	7.78	□□□□□ -1.16
PAX6-256	ENST00000639394	RNF223	E7ERA6	249 aa		7.78	□□□□□ -1.16
PAX6-256	ENST00000639394	MED14OS	P0DP75	135 aa		7.78	□□□□□ -1.16
PAX6-256	ENST00000639394	WFDC9	Q8NEX5	89 aa		7.78	□□□□□ -1.16
PAX6-256	ENST00000639394	LINC00308	Q8TCZ7	52 aa		7.78	□□□□□ -1.16
PAX6-256	ENST00000639394	ZNF625	Q96I27	306 aa	Predicted RBP	7.78	□□□□□ -1.16
PAX6-256	ENST00000639394	PRRC2A	P48634	2157 aa	Known RBP	7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	IGHV7-4-1	A0A0J9YVY3	117 aa		7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	HCG22	E2RYF7	251 aa		7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	SAA1	P0DJI8	122 aa	Predicted RBP	7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	LINC00313	P59037	77 aa		7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	C22orf34	Q6ZV56	151 aa		7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	FAM218A	Q96MZ4	157 aa		7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	SPTA1	P02549	2419 aa		7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	FBXL19-AS1	Q494R0	122 aa		7.77	□□□□□ -1.17
PAX6-256	ENST00000639394	TPR	P12270	2363 aa	Known RBP	7.76	□□□□□ -1.17
PAX6-256	ENST00000639394	TRBV6-8	A0A0A6YYG3	113 aa		7.76	□□□□□ -1.17
PAX6-256	ENST00000639394	WT1-AS	Q06250	92 aa		7.76	□□□□□ -1.17
PAX6-256	ENST00000639394		Q5VV11	94 aa		7.76	□□□□□ -1.17
PAX6-256	ENST00000639394	SPTSSB	Q8NFR3	76 aa		7.76	□□□□□ -1.17
PAX6-256	ENST00000639394	MDFI	Q99750	246 aa		7.76	□□□□□ -1.17
PAX6-256	ENST00000639394		Q9HAA7	133 aa		7.76	□□□□□ -1.17
PAX6-256	ENST00000639394	NDUFA1	O15239	70 aa		7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	POLR2K	P53803	58 aa	Known RBP	7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	ITLN2	Q8WWU7	325 aa	Predicted RBP	7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	NBEA	Q8NFP9	2946 aa		7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	USP24	Q9UPU5	2620 aa		7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	KLLN	B2CW77	178 aa		7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	SAA2	P0DJI9	122 aa	Predicted RBP	7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	GNLY	P22749	145 aa		7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	BBC3	Q96PG8	261 aa	Predicted RBP	7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	DIDO1	Q9BTC0	2240 aa	Known RBP	7.75	□□□□□ -1.17
PAX6-256	ENST00000639394	TRAV21	A0A0B4J279	112 aa		7.74	□□□□□ -1.17
PAX6-256	ENST00000639394	IGKV3D-20	A0A0C4DH25	116 aa		7.74	□□□□□ -1.17
PAX6-256	ENST00000639394	ASB16-AS1	Q495Z4	193 aa		7.74	□□□□□ -1.17
PAX6-256	ENST00000639394	RP1L1	Q8IWN7	2480 aa	Predicted RBP	7.74	□□□□□ -1.17
PAX6-256	ENST00000639394	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.73	□□□□□ -1.17
PAX6-256	ENST00000639394		H0Y9J4	135 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	CHKB-CPT1B	H3BT56	60 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	IGKV2D-40	P01614	121 aa	Predicted RBP	7.73	□□□□□ -1.17
PAX6-256	ENST00000639394		A0A087X002	238 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	TRBV6-5	A0A0K0K1A5	114 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	PSCA	O43653	123 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	LINC01547	P58512	204 aa	Predicted RBP	7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	NDP	Q00604	133 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	MIR7-3HG	Q8N6C7	128 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	C1orf64	Q8NEQ6	169 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	CDC42SE1	Q9NRR8	79 aa		7.73	□□□□□ -1.17
PAX6-256	ENST00000639394	PRR14L	Q5THK1	2151 aa		7.72	□□□□□ -1.17
PAX6-256	ENST00000639394	CACNA1B	Q00975	2339 aa		7.72	□□□□□ -1.17
PAX6-256	ENST00000639394	RPL39L	Q96EH5	51 aa	Known RBP	7.72	□□□□□ -1.17
PAX6-256	ENST00000639394	COL6A6	A6NMZ7	2263 aa		7.72	□□□□□ -1.17
PAX6-256	ENST00000639394	NCR3	O14931	201 aa		7.71	□□□□□ -1.17
PAX6-256	ENST00000639394		Q8N3U1	123 aa		7.71	□□□□□ -1.17
PAX6-256	ENST00000639394	LINC00337	Q8N6G1	96 aa		7.71	□□□□□ -1.17
PAX6-256	ENST00000639394	IGHV3-64	A0A075B6Q5	118 aa		7.71	□□□□□ -1.18
PAX6-256	ENST00000639394	PRB1	P04280	392 aa		7.71	□□□□□ -1.18
PAX6-256	ENST00000639394	PDE6G	P18545	87 aa		7.71	□□□□□ -1.18
PAX6-256	ENST00000639394	ZNF843	Q8N446	348 aa		7.71	□□□□□ -1.18
PAX6-256	ENST00000639394	DSCAML1	Q8TD84	2053 aa		7.71	□□□□□ -1.18
PAX6-256	ENST00000639394	PCNX1	Q96RV3	2341 aa		7.7	□□□□□ -1.18
PAX6-256	ENST00000639394		A0A0J9YXV3	536 aa		7.7	□□□□□ -1.18
PAX6-256	ENST00000639394	BSPH1	Q075Z2	132 aa		7.7	□□□□□ -1.18
PAX6-256	ENST00000639394		Q75L30	129 aa		7.7	□□□□□ -1.18
PAX6-256	ENST00000639394	LINC00167	Q96N53	147 aa		7.7	□□□□□ -1.18
PAX6-256	ENST00000639394	BPY2	O14599	106 aa		7.7	□□□□□ -1.18
PAX6-256	ENST00000639394	CRP	P02741	224 aa		7.7	□□□□□ -1.18
PAX6-256	ENST00000639394	C9orf129	Q5T035	196 aa	Known RBP	7.7	□□□□□ -1.18
PAX6-256	ENST00000639394	HCP5	Q6MZN7	132 aa		7.7	□□□□□ -1.18
PAX6-256	ENST00000639394	IGLV3-9	A0A075B6K5	115 aa		7.69	□□□□□ -1.18
PAX6-256	ENST00000639394	PRM2	P04554	102 aa		7.69	□□□□□ -1.18
PAX6-256	ENST00000639394	IGSF10	Q6WRI0	2623 aa		7.69	□□□□□ -1.18
PAX6-256	ENST00000639394	IGHV3-48	P01763	117 aa		7.68	□□□□□ -1.18
PAX6-256	ENST00000639394	CGB3	P0DN86	165 aa		7.68	□□□□□ -1.18
PAX6-256	ENST00000639394	CGB7	P0DN87	165 aa		7.68	□□□□□ -1.18
PAX6-256	ENST00000639394	RPL39	P62891	51 aa	Known RBP	7.68	□□□□□ -1.18
PAX6-256	ENST00000639394	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.68	□□□□□ -1.18
PAX6-256	ENST00000639394	KALRN	O60229	2985 aa		7.68	□□□□□ -1.18
PAX6-256	ENST00000639394	LOC110117498	A0A087WWA1	95 aa		7.68	□□□□□ -1.18
PAX6-256	ENST00000639394		Q8TAT8	98 aa		7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms