RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	LTBP2	Q14767	1821 aa		0.78	□□□□□ -2.29
MECP2-222	ENST00000637533	HMCN1	Q96RW7	5635 aa		0.78	□□□□□ -2.29
MECP2-222	ENST00000637533	MYH6	P13533	1939 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	ALPK3	Q96L96	1907 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	KIAA1549	Q9HCM3	1950 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	HEATR5A	Q86XA9	2040 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	MDC1	Q14676	2089 aa	Known RBP	0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	TRBV7-4	A0A0J9YYF1	115 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	FAM223B	A6NKX1	122 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533		F8WEM9	126 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	ZNF137P	P52743	207 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	KRTAP10-12	P60413	245 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	RPL37	P61927	97 aa	Known RBP	0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	KRTAP13-4	Q3LI77	160 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533		Q6ZRX8	168 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	FDCSP	Q8NFU4	85 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	LINC00208	Q96KT6	92 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	SPRR4	Q96PI1	79 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	HIGD1B	Q9P298	99 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	PPL	O60437	1756 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	DLEC1	Q9Y238	1755 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	CACNA1D	Q01668	2161 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	GPR179	Q6PRD1	2367 aa		0.77	□□□□□ -2.29
MECP2-222	ENST00000637533	PRRC2B	Q5JSZ5	2229 aa	Known RBP	0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	CIT	O14578	2027 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	MICAL3	Q7RTP6	2002 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	PCDH15	Q96QU1	1955 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	ZSWIM8	A7E2V4	1837 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	SI	P14410	1827 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	STRCP1	A6NGW2	1772 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	ABCA3	Q99758	1704 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	NRXN2	Q9P2S2	1712 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	COL4A5	P29400	1685 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	THOC2	Q8NI27	1593 aa	Known RBP	0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	HMGXB3	Q12766	1538 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	TRGV1	A0A0A0MS02	117 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533		H3BUT2	72 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	CCL22	O00626	93 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	KRTAP12-1	P59990	96 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	HEPN1	Q6WQI6	88 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	COX6B2	Q6YFQ2	88 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	CNFN	Q9BYD5	112 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	FXYD6	Q9H0Q3	95 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	LINC00474	Q9P2X8	69 aa		0.76	□□□□□ -2.29
MECP2-222	ENST00000637533	ANK1	P16157	1881 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	CASZ1	Q86V15	1759 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	ARAP2	Q8WZ64	1704 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	ZC3H13	Q5T200	1668 aa	Known RBP	0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	TOP2B	Q02880	1626 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	EFCAB5	A4FU69	1503 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	ADGRB3	O60242	1522 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	ATP7B	P35670	1465 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	KIAA0100	Q14667	2235 aa	Known RBP	0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	FXYD6-FXYD2	A0A087WZ82	144 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	IQCF6	A8MYZ5	107 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	PRB4	P10163	310 aa	Predicted RBP	0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	KRTAP10-3	P60369	221 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	WFDC2	Q14508	124 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	ATXN8	Q156A1	80 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	SPATA8	Q6RVD6	105 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	NIN	Q8N4C6	2090 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	PLXNA2	O75051	1894 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533		A0A0G2JMZ2	1700 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	RREB1	Q92766	1687 aa		0.75	□□□□□ -2.29
MECP2-222	ENST00000637533	SDK2	Q58EX2	2172 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	TRPM6	Q9BX84	2022 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	ZFC3H1	O60293	1989 aa	Known RBP	0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	MCM3AP	O60318	1980 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	PTPRF	P10586	1907 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	TCHH	Q07283	1943 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.74	□□□□□ -2.29
MECP2-222	ENST00000637533		A0A1B0GU69	56 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	CLPSL1	A2RUU4	121 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533		K7EMI3	77 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	SPINT3	P49223	89 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	KRTAP10-9	P60411	292 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	HAMP	P81172	84 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	COX6A2	Q02221	97 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	PCOTH	Q58A44	107 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	LCE1E	Q5T753	118 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	UBL5	Q9BZL1	73 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	GNG13	Q9P2W3	67 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	CC2D2A	Q9P2K1	1620 aa		0.74	□□□□□ -2.29
MECP2-222	ENST00000637533	RALGAPB	Q86X10	1494 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	DOCK1	Q14185	1865 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	DOCK2	Q92608	1830 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	DOCK10	Q96BY6	2186 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	PCNX2	A6NKB5	2137 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	PI4KA	P42356	2102 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	CHD1	O14646	1710 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	ARHGAP32	A7KAX9	2087 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	KIF21A	Q7Z4S6	1674 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533		A0A087WTM6	91 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	CPSF4L	A6NMK7	179 aa	Known RBP	0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	LY6G6C	O95867	125 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	TDRG1	Q3Y452	100 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533	KRTAP13-1	Q8IUC0	172 aa		0.73	□□□□□ -2.29
MECP2-222	ENST00000637533		Q96NJ1	140 aa		0.73	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms