RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 GAGE2AQ6NT46 116 aa6.86□□□□□ -1.31
GGA3-223ENST00000621870 Q6ZUT4 128 aa6.86□□□□□ -1.31
GGA3-223ENST00000621870 NDUFA7O95182 113 aa6.86□□□□□ -1.31
GGA3-223ENST00000621870 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
GGA3-223ENST00000621870 PROK1P58294 105 aa6.86□□□□□ -1.31
GGA3-223ENST00000621870 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
GGA3-223ENST00000621870 TEX15Q9BXT5 2789 aa6.86□□□□□ -1.31
GGA3-223ENST00000621870 COL6A5A8TX70 2615 aa6.86□□□□□ -1.31
GGA3-223ENST00000621870 HERV-K104P63124 156 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 COL12A1Q99715 3063 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 C11orf86A6NJI1 115 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 K7ERJ3 54 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 CRIP1P50238 77 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 ADAMTS20P59510 1910 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 ZZEF1O43149 2961 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 CRYGDP07320 174 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 DCANP1Q8TF63 244 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 BAALCQ8WXS3 180 aa6.85□□□□□ -1.31
GGA3-223ENST00000621870 WDFY3Q8IZQ1 3526 aa6.84□□□□□ -1.31
GGA3-223ENST00000621870 M0R2N4 97 aa6.84□□□□□ -1.31
GGA3-223ENST00000621870 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.84□□□□□ -1.32
GGA3-223ENST00000621870 REG3AQ06141 175 aa6.84□□□□□ -1.32
GGA3-223ENST00000621870 ETDBQ3ZM63 59 aa6.84□□□□□ -1.32
GGA3-223ENST00000621870 BVES-AS1Q5T3Y7 98 aa6.84□□□□□ -1.32
GGA3-223ENST00000621870 TRAV10A0A0B4J240 114 aa6.83□□□□□ -1.32
GGA3-223ENST00000621870 SOCS3O14543 225 aa6.83□□□□□ -1.32
GGA3-223ENST00000621870 RPL32P62910 135 aaKnown RBP6.83□□□□□ -1.32
GGA3-223ENST00000621870 HAMPP81172 84 aa6.83□□□□□ -1.32
GGA3-223ENST00000621870 KPRPQ5T749 579 aaPredicted RBP6.83□□□□□ -1.32
GGA3-223ENST00000621870 PRR9Q5T870 116 aa6.83□□□□□ -1.32
GGA3-223ENST00000621870 CFAP126Q5VTH2 177 aa6.83□□□□□ -1.32
GGA3-223ENST00000621870 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 CEND1Q8N111 149 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 LECT2O14960 151 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 LINC01545Q5VT33 79 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 C15orf53Q8NAA6 179 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 KIR2DL5BQ8NHK3 375 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 TOMM6Q96B49 74 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 LINC00467Q9BRT7 94 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 TINCRA0A1B0GVN0 87 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 A0A1B0GXF2 115 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 A4D1N5 150 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 RETNQ9HD89 108 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 PKIGQ9Y2B9 76 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 BAHCC1Q9P281 2608 aa6.82□□□□□ -1.32
GGA3-223ENST00000621870 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 NEXN-AS1Q8NBZ9 246 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 C11orf21Q9P2W6 132 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 CFAP47Q6ZTR5 3102 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 LY6G6CO95867 125 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 IGLV1-51P01701 117 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 CFC1BP0CG36 223 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 CFC1P0CG37 223 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 NANOS2P60321 138 aaKnown RBP6.81□□□□□ -1.32
GGA3-223ENST00000621870 ODF1Q14990 250 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 MUSTN1Q8IVN3 82 aa6.81□□□□□ -1.32
GGA3-223ENST00000621870 A0A0J9YWU9 116 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
GGA3-223ENST00000621870 UBE2AP49459 152 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 C12orf74Q32Q52 190 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 CHCHD10Q8WYQ3 142 aaPredicted RBP6.8□□□□□ -1.32
GGA3-223ENST00000621870 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 TRBV6-8A0A0A6YYG3 113 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 LOC100131303A0A0U1RQF7 123 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 TRBV6-4A0A1B0GX49 114 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 H3BMG7 143 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 BRI3O95415 125 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 INAFM2P0DMQ5 153 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 IFITM1P13164 125 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 CDKN2A-AS1Q9UH64 79 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 TRAV12-1A0A0B4J245 112 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 KLLNB2CW77 178 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 M0QY20 66 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 LOC400499M0QZD8 3231 aa6.8□□□□□ -1.32
GGA3-223ENST00000621870 SIVA1O15304 175 aa6.79□□□□□ -1.32
GGA3-223ENST00000621870 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
GGA3-223ENST00000621870 DSCR8Q96T75 97 aa6.79□□□□□ -1.32
GGA3-223ENST00000621870 IGLV2-11P01706 119 aa6.79□□□□□ -1.32
GGA3-223ENST00000621870 RBX1P62877 108 aa6.79□□□□□ -1.32
GGA3-223ENST00000621870 CXCL5P42830 114 aa6.79□□□□□ -1.32
GGA3-223ENST00000621870 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
GGA3-223ENST00000621870 NCR3O14931 201 aa6.79□□□□□ -1.32
GGA3-223ENST00000621870 SS18L2Q9UHA2 77 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 ASPMQ8IZT6 3477 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 SMIM20Q8N5G0 67 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 DMDP11532 3685 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 LRCOL1A6NCL2 159 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 E9PLD3 99 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 K7EP13 123 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 C14orf177Q52M58 125 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 LINC00526Q96FQ7 95 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 UBL5Q9BZL1 73 aa6.78□□□□□ -1.32
GGA3-223ENST00000621870 ATMQ13315 3056 aa6.77□□□□□ -1.33
GGA3-223ENST00000621870 NOTCH1P46531 2555 aa6.77□□□□□ -1.33
GGA3-223ENST00000621870 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms