RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ANKRD36A6QL64 1941 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 RGPD1P0DJD0 1748 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 CUX1P39880 1505 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 IGKV3D-7A0A0C4DH55 119 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 IGKV3OR2-268A0A0C4DH90 116 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 LOC101927531A0A1B0GV80 90 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 UMAD1C9J7I0 102 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 NDUFC1O43677 76 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 IGKV1-17P01599 117 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 IGLV3-19P01714 112 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 SNRPFP62306 86 aaKnown RBP1.92□□□□□ -2.1
LRRC39-204ENST00000620882 HMGN3Q15651 99 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 TMEM14BQ9NUH8 114 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 PSORS1C2Q9UIG4 136 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 HILPDAQ9Y5L2 63 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 SETBP1Q9Y6X0 1596 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 PREX2Q70Z35 1606 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 UNC13BO14795 1591 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 TRBV25-1A0A075B6N4 114 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 TRBV10-1A0A0K0K1A3 114 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 IGLV6-57P01721 117 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 IGHV3-33P01772 117 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 SFTA3P0C7M3 94 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 SMIM13P0DJ93 91 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 XAF1Q6GPH4 301 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 ZNF818PQ6ZRF7 136 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 ITSN2Q9NZM3 1697 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 DUOX2Q9NRD8 1548 aa1.92□□□□□ -2.1
LRRC39-204ENST00000620882 NOTCH1P46531 2555 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 PCLOQ9Y6V0 5065 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 NCOA6Q14686 2063 aaPredicted RBP1.91□□□□□ -2.1
LRRC39-204ENST00000620882 KANTRA0A1W2PQU2 76 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 M0R3E3 92 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 PSCAO43653 123 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 KRTAP13-3Q3SY46 172 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 C2orf82Q6UX34 121 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 LINC00643Q86TS7 51 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 CRCT1Q9UGL9 99 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 LOC285556D6RIA3 1793 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 COL4A2P08572 1712 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 UBR3Q6ZT12 1888 aa1.91□□□□□ -2.1
LRRC39-204ENST00000620882 TRBV6-7A0A0A0MS04 114 aa1.9□□□□□ -2.1
LRRC39-204ENST00000620882 PIGBOS1A0A0B4J2F0 54 aa1.9□□□□□ -2.1
LRRC39-204ENST00000620882 TMEM14DPA8MWL7 114 aa1.9□□□□□ -2.1
LRRC39-204ENST00000620882 IL9P15248 144 aa1.9□□□□□ -2.1
LRRC39-204ENST00000620882 ABCA2Q9BZC7 2435 aa1.9□□□□□ -2.1
LRRC39-204ENST00000620882 DLEC1Q9Y238 1755 aa1.9□□□□□ -2.11
LRRC39-204ENST00000620882 PPYP01298 95 aa1.9□□□□□ -2.11
LRRC39-204ENST00000620882 KLK9Q9UKQ9 250 aa1.9□□□□□ -2.11
LRRC39-204ENST00000620882 ARL2-SNX15V9GYD0 113 aa1.9□□□□□ -2.11
LRRC39-204ENST00000620882 RREB1Q92766 1687 aa1.9□□□□□ -2.11
LRRC39-204ENST00000620882 INTS1Q8N201 2190 aaKnown RBP1.9□□□□□ -2.11
LRRC39-204ENST00000620882 ASXL1Q8IXJ9 1541 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 ICE1Q9Y2F5 2266 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 ZNF831Q5JPB2 1677 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 IGKV2-24A0A0C4DH68 120 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 A0A0J9YY99 117 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 S100A3P33764 101 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 TTTY12Q9BZ98 90 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 NESP48681 1621 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 PTPN23Q9H3S7 1636 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 EFCAB5A4FU69 1503 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 ZNF142P52746 1687 aaPredicted RBP1.89□□□□□ -2.11
LRRC39-204ENST00000620882 TRAV23DV6A0A075B6W5 121 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 A0A087WWC5 75 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 PPP1R17O96001 155 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 RNASE3P12724 160 aaKnown RBP1.89□□□□□ -2.11
LRRC39-204ENST00000620882 PPP1R1CQ8WVI7 109 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 TVP23CQ96ET8 276 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 DMAC1Q96GE9 116 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 WFDC10AQ9H1F0 79 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 ORMDL1Q9P0S3 153 aa1.89□□□□□ -2.11
LRRC39-204ENST00000620882 NBDYA0A0U1RRE5 68 aa1.88□□□□□ -2.11
LRRC39-204ENST00000620882 TMEM170BQ5T4T1 132 aa1.88□□□□□ -2.11
LRRC39-204ENST00000620882 XRN1Q8IZH2 1706 aaKnown RBP1.88□□□□□ -2.11
LRRC39-204ENST00000620882 MRC1P22897 1456 aa1.88□□□□□ -2.11
LRRC39-204ENST00000620882 A0A087WTM6 91 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 IGLV3-32A0A0A0MS00 114 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 ZNF815PA8K554 130 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 HMGN2P05204 90 aaKnown RBP1.87□□□□□ -2.11
LRRC39-204ENST00000620882 PDE6GP18545 87 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 DYNLRB1Q9NP97 96 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 CADP27708 2225 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 COL4A1P02462 1669 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 SPAG11BQ08648 103 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 SPAG11AQ6PDA7 123 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 C6orf201Q7Z4U5 140 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 PRR15LQ9BU68 103 aa1.87□□□□□ -2.11
LRRC39-204ENST00000620882 COL5A1P20908 1838 aaPredicted RBP1.86□□□□□ -2.11
LRRC39-204ENST00000620882 KCPQ6ZWJ8 1503 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 GLI2P10070 1586 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 A0A087WXM4 84 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 MYMXA0A1B0GTQ4 84 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 CCL3L1P16619 93 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 KRTAP10-10P60014 251 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 DEFB121Q5J5C9 76 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 PSMG4Q5JS54 123 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 SNURFQ9Y675 71 aa1.86□□□□□ -2.11
LRRC39-204ENST00000620882 ABCA9Q8IUA7 1624 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms