RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 RAPGEF6Q8TEU7 1601 aa-0.33□□□□□ -2.46
U6.42-201ENST00000618440 PIGBOS1A0A0B4J2F0 54 aa-0.33□□□□□ -2.46
U6.42-201ENST00000618440 HMGN1P05114 100 aa-0.33□□□□□ -2.46
U6.42-201ENST00000618440 SPRR2DP22532 72 aa-0.33□□□□□ -2.46
U6.42-201ENST00000618440 DEFB109BQ30KR1 87 aa-0.33□□□□□ -2.46
U6.42-201ENST00000618440 Q8IZM0 81 aa-0.33□□□□□ -2.46
U6.42-201ENST00000618440 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.33□□□□□ -2.46
U6.42-201ENST00000618440 NPVFQ9HCQ7 196 aa-0.33□□□□□ -2.46
U6.42-201ENST00000618440 SPCS1Q9Y6A9 102 aa-0.33□□□□□ -2.46
U6.42-201ENST00000618440 TSC2P49815 1807 aa-0.34□□□□□ -2.46
U6.42-201ENST00000618440 CTXND1A0A1B0GTU2 59 aa-0.34□□□□□ -2.46
U6.42-201ENST00000618440 MIF4GDA9UHW6 222 aaKnown RBP-0.34□□□□□ -2.46
U6.42-201ENST00000618440 PRM1P04553 51 aa-0.34□□□□□ -2.46
U6.42-201ENST00000618440 FGF7P21781 194 aa-0.34□□□□□ -2.46
U6.42-201ENST00000618440 HAMPP81172 84 aa-0.34□□□□□ -2.46
U6.42-201ENST00000618440 PTPN13Q12923 2485 aa-0.34□□□□□ -2.46
U6.42-201ENST00000618440 C10orf71Q711Q0 1435 aa-0.34□□□□□ -2.46
U6.42-201ENST00000618440 TP53AIP1Q9HCN2 124 aa-0.34□□□□□ -2.46
U6.42-201ENST00000618440 NAIPQ13075 1403 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 FAM25AB3EWG3 89 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 FAM25CB3EWG5 89 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 FAM25GB3EWG6 89 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 COX17Q14061 63 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 Q56UQ5 140 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 SPANXDQ9BXN6 97 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 FAM107BQ9H098 131 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 CHD6Q8TD26 2715 aa-0.35□□□□□ -2.47
U6.42-201ENST00000618440 FAT2Q9NYQ8 4349 aa-0.36□□□□□ -2.47
U6.42-201ENST00000618440 SCN7AQ01118 1682 aa-0.36□□□□□ -2.47
U6.42-201ENST00000618440 SMG6Q86US8 1419 aaKnown RBP-0.36□□□□□ -2.47
U6.42-201ENST00000618440 SPTBN1Q01082 2364 aaKnown RBP-0.36□□□□□ -2.47
U6.42-201ENST00000618440 TRBV7-3A0A075B6L6 115 aa-0.36□□□□□ -2.47
U6.42-201ENST00000618440 SPRR1AP35321 89 aa-0.36□□□□□ -2.47
U6.42-201ENST00000618440 C1orf54Q8WWF1 131 aa-0.36□□□□□ -2.47
U6.42-201ENST00000618440 TSLPQ969D9 159 aa-0.36□□□□□ -2.47
U6.42-201ENST00000618440 MGST2Q99735 147 aa-0.36□□□□□ -2.47
U6.42-201ENST00000618440 ALMS1Q8TCU4 4167 aa-0.36□□□□□ -2.47
U6.42-201ENST00000618440 UQCR11O14957 56 aa-0.37□□□□□ -2.47
U6.42-201ENST00000618440 CATR1Q13166 79 aa-0.37□□□□□ -2.47
U6.42-201ENST00000618440 PPP3R2Q96LZ3 170 aa-0.37□□□□□ -2.47
U6.42-201ENST00000618440 TSC22D3Q99576 134 aa-0.37□□□□□ -2.47
U6.42-201ENST00000618440 DYNLRB1Q9NP97 96 aa-0.37□□□□□ -2.47
U6.42-201ENST00000618440 IGLC7A0M8Q6 106 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 F8VRH5 84 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 HMGN4O00479 90 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 TMEM170BQ5T4T1 132 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 Q6JHZ5 121 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 COMMD6Q7Z4G1 85 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 C5orf38Q86SI9 138 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 BAGE2Q86Y30 109 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 LINC01558Q9Y6Z2 57 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 LRP2P98164 4655 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 ZFHX3Q15911 3703 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 NSD3Q9BZ95 1437 aa-0.38□□□□□ -2.47
U6.42-201ENST00000618440 DIP2CQ9Y2E4 1556 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 MYOM2P54296 1465 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 APOC2P02655 101 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 TPPP2P59282 170 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 KRTAP6-1Q3LI64 71 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 C8orf59Q8N0T1 100 aaPredicted RBP-0.39□□□□□ -2.47
U6.42-201ENST00000618440 LINC00474Q9P2X8 69 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 TULP4Q9NRJ4 1543 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 ARHGEF12Q9NZN5 1544 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 HECTD4Q9Y4D8 3996 aa-0.39□□□□□ -2.47
U6.42-201ENST00000618440 PKD1L1Q8TDX9 2849 aa-0.4□□□□□ -2.47
U6.42-201ENST00000618440 ROCK2O75116 1388 aaKnown RBP-0.4□□□□□ -2.47
U6.42-201ENST00000618440 NUP188Q5SRE5 1749 aa-0.4□□□□□ -2.47
U6.42-201ENST00000618440 GVINP1Q7Z2Y8 2422 aa-0.4□□□□□ -2.47
U6.42-201ENST00000618440 OOSP1A8MZH6 123 aa-0.4□□□□□ -2.47
U6.42-201ENST00000618440 PP6455Q8WZ26 134 aa-0.4□□□□□ -2.47
U6.42-201ENST00000618440 NSD1Q96L73 2696 aaPredicted RBP-0.4□□□□□ -2.47
U6.42-201ENST00000618440 HMGXB3Q12766 1538 aa-0.4□□□□□ -2.47
U6.42-201ENST00000618440 EHBP1L1Q8N3D4 1523 aa-0.41□□□□□ -2.48
U6.42-201ENST00000618440 TRBV6-1A0A0K0K1D8 114 aa-0.41□□□□□ -2.48
U6.42-201ENST00000618440 SSSCA1O60232 199 aa-0.41□□□□□ -2.48
U6.42-201ENST00000618440 CHD1O14646 1710 aa-0.41□□□□□ -2.48
U6.42-201ENST00000618440 KTN1Q86UP2 1357 aaKnown RBP-0.42□□□□□ -2.48
U6.42-201ENST00000618440 TNFP01375 233 aa-0.42□□□□□ -2.48
U6.42-201ENST00000618440 APOC3P02656 99 aa-0.42□□□□□ -2.48
U6.42-201ENST00000618440 DCDP81605 110 aaKnown RBP-0.42□□□□□ -2.48
U6.42-201ENST00000618440 EIF4G3O43432 1585 aaKnown RBP-0.42□□□□□ -2.48
U6.42-201ENST00000618440 CSPG4Q6UVK1 2322 aa-0.42□□□□□ -2.48
U6.42-201ENST00000618440 BSNQ9UPA5 3926 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 SPHKAPQ2M3C7 1700 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 NRKQ7Z2Y5 1582 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 SFT2D2O95562 160 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 AKAIN1P0CW23 69 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 S100A3P33764 101 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 DEFB123Q8N688 67 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 MYOZ3Q8TDC0 251 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 SPRR4Q96PI1 79 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 CDC42SE2Q9NRR3 84 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 TOP2BQ02880 1626 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 CC2D2AQ9P2K1 1620 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 PIEZO2Q9H5I5 2752 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 MAGI1Q96QZ7 1491 aaPredicted RBP-0.43□□□□□ -2.48
U6.42-201ENST00000618440 MRC2Q9UBG0 1479 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 SHANK2Q9UPX8 1470 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 TOPAZ1Q8N9V7 1692 aa-0.43□□□□□ -2.48
U6.42-201ENST00000618440 KIAA0556O60303 1618 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms