RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
SRRM1-223ENST00000600523 SMCO4Q9NRQ5 59 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 SPANXA1Q9NS26 97 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 CSDC2Q9Y534 153 aaKnown RBP8.65□□□□□ -1.02
SRRM1-223ENST00000600523 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
SRRM1-223ENST00000600523 SS18Q15532 418 aa8.64□□□□□ -1.03
SRRM1-223ENST00000600523 KIAA1644Q3SXP7 199 aa8.64□□□□□ -1.03
SRRM1-223ENST00000600523 PRSS3P2Q8NHM4 247 aa8.64□□□□□ -1.03
SRRM1-223ENST00000600523 TRAPPC1Q9Y5R8 145 aa8.64□□□□□ -1.03
SRRM1-223ENST00000600523 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
SRRM1-223ENST00000600523 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
SRRM1-223ENST00000600523 LECT2O14960 151 aa8.63□□□□□ -1.03
SRRM1-223ENST00000600523 IFI27P40305 119 aaPredicted RBP8.63□□□□□ -1.03
SRRM1-223ENST00000600523 CDC42SE2Q9NRR3 84 aa8.63□□□□□ -1.03
SRRM1-223ENST00000600523 UBE2D4Q9Y2X8 147 aa8.63□□□□□ -1.03
SRRM1-223ENST00000600523 CCL25O15444 150 aa8.62□□□□□ -1.03
SRRM1-223ENST00000600523 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
SRRM1-223ENST00000600523 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
SRRM1-223ENST00000600523 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
SRRM1-223ENST00000600523 CHCHD10Q8WYQ3 142 aaPredicted RBP8.61□□□□□ -1.03
SRRM1-223ENST00000600523 DNAH17Q9UFH2 4485 aa8.61□□□□□ -1.03
SRRM1-223ENST00000600523 FRAS1Q86XX4 4008 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 GAGE12HA6NDE8 117 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 C1orf196B1AJZ1 125 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 USP17L23D6RBM5 183 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
SRRM1-223ENST00000600523 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 Q6ZN92 141 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 FA2HQ7L5A8 372 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
SRRM1-223ENST00000600523 FAT2Q9NYQ8 4349 aa8.6□□□□□ -1.03
SRRM1-223ENST00000600523 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
SRRM1-223ENST00000600523 LINC00959A0A1B0GUT2 108 aa8.59□□□□□ -1.03
SRRM1-223ENST00000600523 GCSHP23434 173 aa8.59□□□□□ -1.03
SRRM1-223ENST00000600523 XCL1P47992 114 aa8.59□□□□□ -1.03
SRRM1-223ENST00000600523 MRPS36P82909 103 aaKnown RBP8.59□□□□□ -1.03
SRRM1-223ENST00000600523 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
SRRM1-223ENST00000600523 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
SRRM1-223ENST00000600523 RAB5BP61020 215 aa8.58□□□□□ -1.04
SRRM1-223ENST00000600523 C2orf66Q6UXQ4 117 aa8.58□□□□□ -1.04
SRRM1-223ENST00000600523 C2orf88Q9BSF0 95 aa8.58□□□□□ -1.04
SRRM1-223ENST00000600523 TRAV13-1A0A0B4J241 112 aa8.57□□□□□ -1.04
SRRM1-223ENST00000600523 IFITM10A6NMD0 228 aa8.57□□□□□ -1.04
SRRM1-223ENST00000600523 NPSP0C0P6 89 aa8.57□□□□□ -1.04
SRRM1-223ENST00000600523 CD164L2Q6UWJ8 174 aa8.57□□□□□ -1.04
SRRM1-223ENST00000600523 Q6ZUT4 128 aa8.57□□□□□ -1.04
SRRM1-223ENST00000600523 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
SRRM1-223ENST00000600523 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
SRRM1-223ENST00000600523 MALP21145 153 aa8.56□□□□□ -1.04
SRRM1-223ENST00000600523 WFDC2Q14508 124 aa8.56□□□□□ -1.04
SRRM1-223ENST00000600523 RNASE13Q5GAN3 156 aaKnown RBP8.56□□□□□ -1.04
SRRM1-223ENST00000600523 KRTAP26-1Q6PEX3 210 aa8.56□□□□□ -1.04
SRRM1-223ENST00000600523 TEX43Q6ZNM6 134 aa8.56□□□□□ -1.04
SRRM1-223ENST00000600523 TMEM141Q96I45 108 aa8.56□□□□□ -1.04
SRRM1-223ENST00000600523 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.55□□□□□ -1.04
SRRM1-223ENST00000600523 VCX2Q9H322 139 aa8.55□□□□□ -1.04
SRRM1-223ENST00000600523 HECTD4Q9Y4D8 3996 aa8.55□□□□□ -1.04
SRRM1-223ENST00000600523 EPPK1P58107 5090 aaKnown RBP8.54□□□□□ -1.04
SRRM1-223ENST00000600523 COX7A2LO14548 114 aa8.54□□□□□ -1.04
SRRM1-223ENST00000600523 FUSP35637 526 aaKnown RBP eCLIP8.54□□□□□ -1.04
SRRM1-223ENST00000600523 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
SRRM1-223ENST00000600523 IGLV4-3A0A075B6K6 122 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 IGHV1-58A0A0C4DH39 117 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 APOMO95445 188 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 PRSS1P07477 247 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 FOXI1Q12951 378 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 TOMM6Q96B49 74 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
SRRM1-223ENST00000600523 PKD1P98161 4303 aa8.53□□□□□ -1.04
SRRM1-223ENST00000600523 LINC01546A6NGU7 62 aa8.52□□□□□ -1.05
SRRM1-223ENST00000600523 ZNF561-AS1K7EIQ3 104 aa8.52□□□□□ -1.05
SRRM1-223ENST00000600523 CDK2AP2O75956 126 aa8.52□□□□□ -1.05
SRRM1-223ENST00000600523 LINC00614P0C842 121 aa8.52□□□□□ -1.05
SRRM1-223ENST00000600523 ERASQ7Z444 233 aa8.52□□□□□ -1.05
SRRM1-223ENST00000600523 SEC11AP67812 179 aa8.51□□□□□ -1.05
SRRM1-223ENST00000600523 PKIGQ9Y2B9 76 aa8.51□□□□□ -1.05
SRRM1-223ENST00000600523 GVQW2A0A096LPI5 108 aaPredicted RBP8.5□□□□□ -1.05
SRRM1-223ENST00000600523 IGIPA6NJ69 53 aa8.5□□□□□ -1.05
SRRM1-223ENST00000600523 KRTAP10-1P60331 282 aa8.5□□□□□ -1.05
SRRM1-223ENST00000600523 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.49□□□□□ -1.05
SRRM1-223ENST00000600523 HBDP02042 147 aa8.49□□□□□ -1.05
SRRM1-223ENST00000600523 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
SRRM1-223ENST00000600523 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
SRRM1-223ENST00000600523 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
SRRM1-223ENST00000600523 C15orf56Q8N910 161 aa8.49□□□□□ -1.05
SRRM1-223ENST00000600523 TRGC2P03986 189 aa8.48□□□□□ -1.05
SRRM1-223ENST00000600523 C5orf38Q86SI9 138 aa8.48□□□□□ -1.05
SRRM1-223ENST00000600523 CHCHD1Q96BP2 118 aaKnown RBP8.48□□□□□ -1.05
SRRM1-223ENST00000600523 AMELXQ99217 191 aa8.48□□□□□ -1.05
SRRM1-223ENST00000600523 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
SRRM1-223ENST00000600523 IGHV3-64A0A075B6Q5 118 aa8.47□□□□□ -1.05
SRRM1-223ENST00000600523 UBE2D1P51668 147 aa8.47□□□□□ -1.05
SRRM1-223ENST00000600523 HERVK_113P63121 156 aa8.47□□□□□ -1.05
SRRM1-223ENST00000600523 C9orf163Q8N9P6 203 aa8.47□□□□□ -1.05
SRRM1-223ENST00000600523 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms