RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 IMMP2LQ96T52 175 aa18.42■□□□□ 0.54
SSBP4-206ENST00000599699 SMIM2Q9BVW6 85 aa18.42■□□□□ 0.54
SSBP4-206ENST00000599699 TCAPO15273 167 aa18.41■□□□□ 0.54
SSBP4-206ENST00000599699 PRSS1P07477 247 aa18.41■□□□□ 0.54
SSBP4-206ENST00000599699 SMAGPQ0VAQ4 97 aa18.41■□□□□ 0.54
SSBP4-206ENST00000599699 Q8N1X5 172 aa18.4■□□□□ 0.54
SSBP4-206ENST00000599699 CHCHD10Q8WYQ3 142 aaPredicted RBP18.4■□□□□ 0.54
SSBP4-206ENST00000599699 HAMPP81172 84 aa18.39■□□□□ 0.53
SSBP4-206ENST00000599699 TMEM18Q96B42 140 aa18.39■□□□□ 0.53
SSBP4-206ENST00000599699 ZNF664Q8N3J9 261 aa18.38■□□□□ 0.53
SSBP4-206ENST00000599699 CLRN3Q8NCR9 226 aa18.38■□□□□ 0.53
SSBP4-206ENST00000599699 CDC42SE2Q9NRR3 84 aa18.38■□□□□ 0.53
SSBP4-206ENST00000599699 FAM30AQ9NZY2 134 aa18.38■□□□□ 0.53
SSBP4-206ENST00000599699 hDV102S1A0JD36 115 aa18.36■□□□□ 0.53
SSBP4-206ENST00000599699 KRTAP4-5Q9BYR2 181 aa18.36■□□□□ 0.53
SSBP4-206ENST00000599699 UBE2D4Q9Y2X8 147 aa18.35■□□□□ 0.53
SSBP4-206ENST00000599699 LINC00959A0A1B0GUT2 108 aa18.34■□□□□ 0.53
SSBP4-206ENST00000599699 RAB5AP20339 215 aa18.34■□□□□ 0.53
SSBP4-206ENST00000599699 S100PP25815 95 aa18.34■□□□□ 0.53
SSBP4-206ENST00000599699 XCL1P47992 114 aa18.34■□□□□ 0.53
SSBP4-206ENST00000599699 SS18Q15532 418 aa18.33■□□□□ 0.52
SSBP4-206ENST00000599699 C10orf91Q5T1B1 145 aa18.33■□□□□ 0.52
SSBP4-206ENST00000599699 CFAP161Q6P656 301 aa18.33■□□□□ 0.52
SSBP4-206ENST00000599699 LAMTOR2Q9Y2Q5 125 aa18.33■□□□□ 0.52
SSBP4-206ENST00000599699 CSDC2Q9Y534 153 aaKnown RBP18.33■□□□□ 0.52
SSBP4-206ENST00000599699 LOC389332A0A1B0GUA5 103 aa18.32■□□□□ 0.52
SSBP4-206ENST00000599699 CCL25O15444 150 aa18.32■□□□□ 0.52
SSBP4-206ENST00000599699 MAP1LC3AQ9H492 121 aa18.32■□□□□ 0.52
SSBP4-206ENST00000599699 AP5S1Q9NUS5 200 aa18.32■□□□□ 0.52
SSBP4-206ENST00000599699 TRAV9-1A0A075B6T8 112 aa18.31■□□□□ 0.52
SSBP4-206ENST00000599699 RPL39P62891 51 aaKnown RBP18.31■□□□□ 0.52
SSBP4-206ENST00000599699 RNASE13Q5GAN3 156 aaKnown RBP18.31■□□□□ 0.52
SSBP4-206ENST00000599699 CARHSP1Q9Y2V2 147 aaKnown RBP18.31■□□□□ 0.52
SSBP4-206ENST00000599699 SMR3BP02814 79 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-206ENST00000599699 TIMM21Q9BVV7 248 aa18.3■□□□□ 0.52
SSBP4-206ENST00000599699 RPS10P5Q9NQ39 176 aa18.3■□□□□ 0.52
SSBP4-206ENST00000599699 FOXI1Q12951 378 aa18.29■□□□□ 0.52
SSBP4-206ENST00000599699 Q6ZSA8 131 aa18.29■□□□□ 0.52
SSBP4-206ENST00000599699 EPM2AB3EWF7 344 aa18.28■□□□□ 0.52
SSBP4-206ENST00000599699 RHEBQ15382 184 aa18.28■□□□□ 0.52
SSBP4-206ENST00000599699 Q6ZUT4 128 aa18.28■□□□□ 0.52
SSBP4-206ENST00000599699 PCLOQ9Y6V0 5065 aa18.28■□□□□ 0.52
SSBP4-206ENST00000599699 C15orf56Q8N910 161 aa18.27■□□□□ 0.52
SSBP4-206ENST00000599699 PRSS47A8MTI9 375 aa18.26■□□□□ 0.51
SSBP4-206ENST00000599699 HIGD2BQ4VC39 106 aa18.26■□□□□ 0.51
SSBP4-206ENST00000599699 SPANXA1Q9NS26 97 aa18.26■□□□□ 0.51
SSBP4-206ENST00000599699 TRAV13-1A0A0B4J241 112 aa18.25■□□□□ 0.51
SSBP4-206ENST00000599699 C9orf163Q8N9P6 203 aa18.25■□□□□ 0.51
SSBP4-206ENST00000599699 DNAH8Q96JB1 4490 aa18.25■□□□□ 0.51
SSBP4-206ENST00000599699 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-206ENST00000599699 C1orf196B1AJZ1 125 aa18.24■□□□□ 0.51
SSBP4-206ENST00000599699 CNBPP62633 177 aaKnown RBP18.24■□□□□ 0.51
SSBP4-206ENST00000599699 CD164L2Q6UWJ8 174 aa18.24■□□□□ 0.51
SSBP4-206ENST00000599699 KIAA1644Q3SXP7 199 aa18.23■□□□□ 0.51
SSBP4-206ENST00000599699 Q8N8P6 123 aa18.23■□□□□ 0.51
SSBP4-206ENST00000599699 ABCA13Q86UQ4 5058 aa18.23■□□□□ 0.51
SSBP4-206ENST00000599699 APOC3P02656 99 aa18.22■□□□□ 0.51
SSBP4-206ENST00000599699 Q5VSD8 79 aa18.22■□□□□ 0.51
SSBP4-206ENST00000599699 NDUFA5Q16718 116 aa18.21■□□□□ 0.51
SSBP4-206ENST00000599699 OPRPNQ99935 248 aaPredicted RBP18.21■□□□□ 0.51
SSBP4-206ENST00000599699 FAM229AH3BQW9 127 aa18.2■□□□□ 0.5
SSBP4-206ENST00000599699 SCXQ7RTU7 201 aa18.2■□□□□ 0.5
SSBP4-206ENST00000599699 CHAC1Q9BUX1 264 aa18.2■□□□□ 0.5
SSBP4-206ENST00000599699 GNB1LQ9BYB4 327 aa18.2■□□□□ 0.5
SSBP4-206ENST00000599699 IGHV1-58A0A0C4DH39 117 aa18.19■□□□□ 0.5
SSBP4-206ENST00000599699 SLPIP03973 132 aa18.19■□□□□ 0.5
SSBP4-206ENST00000599699 IFI27P40305 119 aaPredicted RBP18.19■□□□□ 0.5
SSBP4-206ENST00000599699 GVQW2A0A096LPI5 108 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-206ENST00000599699 MRPS36P82909 103 aaKnown RBP18.18■□□□□ 0.5
SSBP4-206ENST00000599699 COX19Q49B96 90 aa18.18■□□□□ 0.5
SSBP4-206ENST00000599699 NXT2Q9NPJ8 142 aaKnown RBP18.18■□□□□ 0.5
SSBP4-206ENST00000599699 IGHV3-64A0A075B6Q5 118 aa18.17■□□□□ 0.5
SSBP4-206ENST00000599699 MALP21145 153 aa18.17■□□□□ 0.5
SSBP4-206ENST00000599699 ORMDL2Q53FV1 153 aa18.17■□□□□ 0.5
SSBP4-206ENST00000599699 COX7A2LO14548 114 aa18.16■□□□□ 0.5
SSBP4-206ENST00000599699 SVBPQ8N300 66 aa18.16■□□□□ 0.5
SSBP4-206ENST00000599699 IFITM10A6NMD0 228 aa18.15■□□□□ 0.5
SSBP4-206ENST00000599699 SNAPINO95295 136 aa18.15■□□□□ 0.5
SSBP4-206ENST00000599699 SDIM1Q6ZPB5 146 aa18.15■□□□□ 0.5
SSBP4-206ENST00000599699 FAM104AQ969W3 186 aa18.15■□□□□ 0.5
SSBP4-206ENST00000599699 CYSLTR1Q9Y271 337 aa18.15■□□□□ 0.5
SSBP4-206ENST00000599699 FAT1Q14517 4588 aa18.14■□□□□ 0.49
SSBP4-206ENST00000599699 CIRBP-AS1Q8TBR5 109 aa18.14■□□□□ 0.49
SSBP4-206ENST00000599699 PYGO1Q9Y3Y4 419 aa18.14■□□□□ 0.49
SSBP4-206ENST00000599699 K7EMI3 77 aa18.13■□□□□ 0.49
SSBP4-206ENST00000599699 MT-ND6P03923 174 aa18.13■□□□□ 0.49
SSBP4-206ENST00000599699 C2orf66Q6UXQ4 117 aa18.13■□□□□ 0.49
SSBP4-206ENST00000599699 FABP9Q0Z7S8 132 aa18.12■□□□□ 0.49
SSBP4-206ENST00000599699 C5orf38Q86SI9 138 aa18.12■□□□□ 0.49
SSBP4-206ENST00000599699 LINC00526Q96FQ7 95 aa18.12■□□□□ 0.49
SSBP4-206ENST00000599699 MRPL18Q9H0U6 180 aaKnown RBP18.12■□□□□ 0.49
SSBP4-206ENST00000599699 ZNF561-AS1K7EIQ3 104 aa18.11■□□□□ 0.49
SSBP4-206ENST00000599699 PRSS3P2Q8NHM4 247 aa18.11■□□□□ 0.49
SSBP4-206ENST00000599699 IGLV4-3A0A075B6K6 122 aa18.1■□□□□ 0.49
SSBP4-206ENST00000599699 LINC00528Q8N1L1 170 aa18.1■□□□□ 0.49
SSBP4-206ENST00000599699 TMEM141Q96I45 108 aa18.1■□□□□ 0.49
SSBP4-206ENST00000599699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.1■□□□□ 0.49
SSBP4-206ENST00000599699 TGIF2-C20orf24A0A0A6YYL0 155 aa18.09■□□□□ 0.49
SSBP4-206ENST00000599699 ALKBH7Q9BT30 221 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-206ENST00000599699 DPH3Q96FX2 82 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms