RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
KDM4B-208ENST00000589104 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.86
KDM4B-208ENST00000589104 GNLYP22749 145 aa9.65□□□□□ -0.86
KDM4B-208ENST00000589104 DSCR8Q96T75 97 aa9.65□□□□□ -0.86
KDM4B-208ENST00000589104 CENPEQ02224 2701 aa9.65□□□□□ -0.87
KDM4B-208ENST00000589104 UBR5O95071 2799 aaPredicted RBP9.65□□□□□ -0.87
KDM4B-208ENST00000589104 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.65□□□□□ -0.87
KDM4B-208ENST00000589104 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.87
KDM4B-208ENST00000589104 B4DSR2 109 aa9.65□□□□□ -0.87
KDM4B-208ENST00000589104 TRIAP1O43715 76 aa9.65□□□□□ -0.87
KDM4B-208ENST00000589104 Q6ZSV7 163 aa9.65□□□□□ -0.87
KDM4B-208ENST00000589104 CITED2Q99967 270 aaPredicted RBP9.65□□□□□ -0.87
KDM4B-208ENST00000589104 TRAV12-2A0A075B6T6 113 aa9.64□□□□□ -0.87
KDM4B-208ENST00000589104 NDUFA1O15239 70 aa9.64□□□□□ -0.87
KDM4B-208ENST00000589104 DEFB112Q30KQ8 113 aa9.64□□□□□ -0.87
KDM4B-208ENST00000589104 IGHV4-59P01825 116 aa9.64□□□□□ -0.87
KDM4B-208ENST00000589104 CCL19Q99731 98 aa9.64□□□□□ -0.87
KDM4B-208ENST00000589104 MXRA5Q9NR99 2828 aa9.64□□□□□ -0.87
KDM4B-208ENST00000589104 PTPN13Q12923 2485 aa9.64□□□□□ -0.87
KDM4B-208ENST00000589104 LY6EQ16553 131 aa9.63□□□□□ -0.87
KDM4B-208ENST00000589104 FAM208BQ5VWN6 2430 aa9.63□□□□□ -0.87
KDM4B-208ENST00000589104 UQCRQO14949 82 aa9.63□□□□□ -0.87
KDM4B-208ENST00000589104 RPL11P62913 178 aaKnown RBP9.63□□□□□ -0.87
KDM4B-208ENST00000589104 TMEM61Q8N0U2 210 aa9.63□□□□□ -0.87
KDM4B-208ENST00000589104 H7C423 109 aa9.62□□□□□ -0.87
KDM4B-208ENST00000589104 LRRC75A-AS1Q8N1F1 130 aa9.62□□□□□ -0.87
KDM4B-208ENST00000589104 PRRC2AP48634 2157 aaKnown RBP9.62□□□□□ -0.87
KDM4B-208ENST00000589104 PROK1P58294 105 aa9.62□□□□□ -0.87
KDM4B-208ENST00000589104 SNRPD3P62318 126 aaKnown RBP9.62□□□□□ -0.87
KDM4B-208ENST00000589104 DUX5Q96PT3 197 aa9.62□□□□□ -0.87
KDM4B-208ENST00000589104 LST1O00453 97 aa9.61□□□□□ -0.87
KDM4B-208ENST00000589104 HOXD3P31249 432 aaPredicted RBP9.61□□□□□ -0.87
KDM4B-208ENST00000589104 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
KDM4B-208ENST00000589104 KRTAP1-3Q8IUG1 177 aa9.61□□□□□ -0.87
KDM4B-208ENST00000589104 ZNF625Q96I27 306 aaPredicted RBP9.61□□□□□ -0.87
KDM4B-208ENST00000589104 CFAP46Q8IYW2 2715 aa9.61□□□□□ -0.87
KDM4B-208ENST00000589104 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
KDM4B-208ENST00000589104 LY6DQ14210 128 aa9.61□□□□□ -0.87
KDM4B-208ENST00000589104 CYSTM1Q9H1C7 97 aa9.61□□□□□ -0.87
KDM4B-208ENST00000589104 H3BT86 120 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 LINC01356Q8N9X3 169 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 MYO9AB2RTY4 2548 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 ACACBO00763 2458 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 PLAC8L1A1L4L8 177 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 C4orf3Q8WVX3 66 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 C1orf43Q9BWL3 253 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 HIVEP3Q5T1R4 2406 aa9.59□□□□□ -0.87
KDM4B-208ENST00000589104 USP9YO00507 2555 aaPredicted RBP9.59□□□□□ -0.88
KDM4B-208ENST00000589104 TRAV13-1A0A0B4J241 112 aa9.58□□□□□ -0.88
KDM4B-208ENST00000589104 CD28P10747 220 aa9.58□□□□□ -0.88
KDM4B-208ENST00000589104 ICOSQ9Y6W8 199 aa9.58□□□□□ -0.88
KDM4B-208ENST00000589104 IGHV3OR16-12A0A075B7B8 117 aa9.58□□□□□ -0.88
KDM4B-208ENST00000589104 TRACP01848 142 aa9.58□□□□□ -0.88
KDM4B-208ENST00000589104 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
KDM4B-208ENST00000589104 TRBV7-7A0A0K0K1E9 115 aa9.57□□□□□ -0.88
KDM4B-208ENST00000589104 COX6CP09669 75 aa9.57□□□□□ -0.88
KDM4B-208ENST00000589104 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
KDM4B-208ENST00000589104 NOTCH2Q04721 2471 aa9.56□□□□□ -0.88
KDM4B-208ENST00000589104 COX6A2Q02221 97 aa9.56□□□□□ -0.88
KDM4B-208ENST00000589104 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
KDM4B-208ENST00000589104 SMCR5Q8TEV8 140 aa9.56□□□□□ -0.88
KDM4B-208ENST00000589104 WIPF1O43516 503 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 GIG44P09565 113 aaPredicted RBP9.55□□□□□ -0.88
KDM4B-208ENST00000589104 LINC00242Q5T6M2 205 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 NTM-AS1Q6ZSK4 140 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 C18orf65Q6ZTR6 163 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 WNK1Q9H4A3 2382 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 IGHV4-31P0DP07 118 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 COX7CP15954 63 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 SYNJ2BPP57105 145 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 OBSCN-AS1Q96MR7 158 aa9.55□□□□□ -0.88
KDM4B-208ENST00000589104 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
KDM4B-208ENST00000589104 C1orf158Q8N1D5 194 aa9.54□□□□□ -0.88
KDM4B-208ENST00000589104 DNAH1Q9P2D7 4330 aa9.53□□□□□ -0.88
KDM4B-208ENST00000589104 F5H697 171 aa9.53□□□□□ -0.88
KDM4B-208ENST00000589104 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
KDM4B-208ENST00000589104 A0A1B0GX51 115 aa9.53□□□□□ -0.88
KDM4B-208ENST00000589104 OXTP01178 125 aa9.53□□□□□ -0.88
KDM4B-208ENST00000589104 DEFB114Q30KQ6 69 aa9.53□□□□□ -0.88
KDM4B-208ENST00000589104 SONP18583 2426 aaKnown RBP9.53□□□□□ -0.88
KDM4B-208ENST00000589104 UTP20O75691 2785 aaKnown RBP9.53□□□□□ -0.88
KDM4B-208ENST00000589104 ZNF415Q09FC8 603 aa9.52□□□□□ -0.88
KDM4B-208ENST00000589104 DPH3Q96FX2 82 aa9.52□□□□□ -0.88
KDM4B-208ENST00000589104 NDUFA12Q9UI09 145 aa9.52□□□□□ -0.88
KDM4B-208ENST00000589104 MYO18BQ8IUG5 2567 aa9.52□□□□□ -0.89
KDM4B-208ENST00000589104 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
KDM4B-208ENST00000589104 DAND5Q8N907 189 aa9.52□□□□□ -0.89
KDM4B-208ENST00000589104 KNCNA6PVL3 124 aa9.51□□□□□ -0.89
KDM4B-208ENST00000589104 POLQO75417 2590 aa9.51□□□□□ -0.89
KDM4B-208ENST00000589104 A8MZ25 164 aa9.51□□□□□ -0.89
KDM4B-208ENST00000589104 CDKN2A-AS1Q9UH64 79 aa9.51□□□□□ -0.89
KDM4B-208ENST00000589104 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
KDM4B-208ENST00000589104 ODF3L2Q3SX64 289 aa9.51□□□□□ -0.89
KDM4B-208ENST00000589104 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
KDM4B-208ENST00000589104 CSNK1G2-AS1Q8NCQ2 148 aa9.5□□□□□ -0.89
KDM4B-208ENST00000589104 C19orf73Q9NVV2 129 aa9.5□□□□□ -0.89
KDM4B-208ENST00000589104 USP9XQ93008 2570 aaPredicted RBP9.5□□□□□ -0.89
KDM4B-208ENST00000589104 TRBV10-1A0A0K0K1A3 114 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 235.6 ms