RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 TACC2O95359 2948 aa9.51□□□□□ -0.89
DNMT1-207ENST00000586588 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
DNMT1-207ENST00000586588 NDUFC2O95298 119 aa9.51□□□□□ -0.89
DNMT1-207ENST00000586588 ZFP36P26651 326 aaKnown RBP9.51□□□□□ -0.89
DNMT1-207ENST00000586588 SAA4P35542 130 aa9.51□□□□□ -0.89
DNMT1-207ENST00000586588 Q9HAA7 133 aa9.5□□□□□ -0.89
DNMT1-207ENST00000586588 LINC00846Q9NV44 126 aa9.5□□□□□ -0.89
DNMT1-207ENST00000586588 ACACBO00763 2458 aa9.5□□□□□ -0.89
DNMT1-207ENST00000586588 CSMD1Q96PZ7 3565 aa9.5□□□□□ -0.89
DNMT1-207ENST00000586588 RNF152Q8N8N0 203 aa9.5□□□□□ -0.89
DNMT1-207ENST00000586588 TRAV13-2A0A0B4J235 113 aa9.5□□□□□ -0.89
DNMT1-207ENST00000586588 H3BUA1 57 aa9.5□□□□□ -0.89
DNMT1-207ENST00000586588 NACAE9PAV3 2078 aa9.49□□□□□ -0.89
DNMT1-207ENST00000586588 COL12A1Q99715 3063 aa9.49□□□□□ -0.89
DNMT1-207ENST00000586588 TRAV12-2A0A075B6T6 113 aa9.49□□□□□ -0.89
DNMT1-207ENST00000586588 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-207ENST00000586588 MOB4Q9Y3A3 225 aa9.49□□□□□ -0.89
DNMT1-207ENST00000586588 IGSF10Q6WRI0 2623 aa9.49□□□□□ -0.89
DNMT1-207ENST00000586588 A0A087WVE0 104 aa9.48□□□□□ -0.89
DNMT1-207ENST00000586588 K7EMT4 169 aa9.48□□□□□ -0.89
DNMT1-207ENST00000586588 FBXL19-AS1Q494R0 122 aa9.48□□□□□ -0.89
DNMT1-207ENST00000586588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-207ENST00000586588 IGKV2-29A2NJV5 120 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-207ENST00000586588 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-207ENST00000586588 LINC00467Q9BRT7 94 aa9.48□□□□□ -0.89
DNMT1-207ENST00000586588 C14orf132Q9NPU4 83 aa9.48□□□□□ -0.89
DNMT1-207ENST00000586588 FAM19A3Q7Z5A8 133 aa9.47□□□□□ -0.89
DNMT1-207ENST00000586588 SPTBN1Q01082 2364 aaKnown RBP9.47□□□□□ -0.89
DNMT1-207ENST00000586588 USP24Q9UPU5 2620 aa9.47□□□□□ -0.89
DNMT1-207ENST00000586588 A0A0U1RRA0 63 aa9.47□□□□□ -0.89
DNMT1-207ENST00000586588 FHL2Q14192 279 aa9.47□□□□□ -0.89
DNMT1-207ENST00000586588 RS1O15537 224 aa9.46□□□□□ -0.89
DNMT1-207ENST00000586588 COX6A2Q02221 97 aa9.46□□□□□ -0.89
DNMT1-207ENST00000586588 PROK1P58294 105 aa9.46□□□□□ -0.9
DNMT1-207ENST00000586588 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 H0YGX0 51 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 SMIM1B2RUZ4 78 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 IGHV3-11P01762 117 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 CRPP02741 224 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
DNMT1-207ENST00000586588 LINC00242Q5T6M2 205 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 IGHV3-73A0A0B4J1V6 119 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 SPINK13Q1W4C9 94 aa9.45□□□□□ -0.9
DNMT1-207ENST00000586588 HOXD3P31249 432 aaPredicted RBP9.44□□□□□ -0.9
DNMT1-207ENST00000586588 ATP5EP2Q5VTU8 51 aa9.44□□□□□ -0.9
DNMT1-207ENST00000586588 PRO0628Q9UI54 55 aa9.44□□□□□ -0.9
DNMT1-207ENST00000586588 CACNA1BQ00975 2339 aa9.44□□□□□ -0.9
DNMT1-207ENST00000586588 IGHV3OR16-12A0A075B7B8 117 aa9.44□□□□□ -0.9
DNMT1-207ENST00000586588 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
DNMT1-207ENST00000586588 S100A7L2Q5SY68 101 aa9.44□□□□□ -0.9
DNMT1-207ENST00000586588 C11orf71Q6IPW1 123 aa9.44□□□□□ -0.9
DNMT1-207ENST00000586588 C10orf105Q8TEF2 133 aa9.44□□□□□ -0.9
DNMT1-207ENST00000586588 IGKV3-20P01619 116 aa9.43□□□□□ -0.9
DNMT1-207ENST00000586588 A0A087WYN8 130 aa9.43□□□□□ -0.9
DNMT1-207ENST00000586588 PSMB8P28062 276 aa9.43□□□□□ -0.9
DNMT1-207ENST00000586588 DGAT2L7PQ6IED9 249 aa9.43□□□□□ -0.9
DNMT1-207ENST00000586588 ZFYVE26Q68DK2 2539 aa9.43□□□□□ -0.9
DNMT1-207ENST00000586588 SVEP1Q4LDE5 3571 aa9.42□□□□□ -0.9
DNMT1-207ENST00000586588 ASH1LQ9NR48 2969 aaKnown RBP9.42□□□□□ -0.9
DNMT1-207ENST00000586588 PFN2P35080 140 aa9.42□□□□□ -0.9
DNMT1-207ENST00000586588 A0A1W2PPR1 153 aa9.42□□□□□ -0.9
DNMT1-207ENST00000586588 GNLYP22749 145 aa9.42□□□□□ -0.9
DNMT1-207ENST00000586588 Q9UF83 564 aa9.42□□□□□ -0.9
DNMT1-207ENST00000586588 GHRHP01286 108 aa9.41□□□□□ -0.9
DNMT1-207ENST00000586588 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
DNMT1-207ENST00000586588 VPS13CQ709C8 3753 aa9.41□□□□□ -0.9
DNMT1-207ENST00000586588 Q6ZSN1 163 aa9.41□□□□□ -0.9
DNMT1-207ENST00000586588 SERP1Q9Y6X1 66 aa9.41□□□□□ -0.9
DNMT1-207ENST00000586588 MED13LQ71F56 2210 aa9.41□□□□□ -0.9
DNMT1-207ENST00000586588 FAM236DA0A1B0GTK5 79 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 CCKP06307 115 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 FAM236CP0DP71 79 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 EDN2P20800 178 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 PIMREGQ9BSJ6 248 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 TMEM243Q9BU79 118 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 RBMY1BA6NDE4 496 aaKnown RBP9.4□□□□□ -0.9
DNMT1-207ENST00000586588 RBMY1EA6NEQ0 496 aaKnown RBP9.4□□□□□ -0.9
DNMT1-207ENST00000586588 K7EQG2 157 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 RBMY1DP0C7P1 496 aaKnown RBP9.4□□□□□ -0.9
DNMT1-207ENST00000586588 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.9
DNMT1-207ENST00000586588 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
DNMT1-207ENST00000586588 SMIM11BQ8TCY0 68 aa9.4□□□□□ -0.9
DNMT1-207ENST00000586588 IGKV2-28A0A075B6P5 120 aa9.4□□□□□ -0.91
DNMT1-207ENST00000586588 IGKV2D-28P01615 120 aa9.4□□□□□ -0.91
DNMT1-207ENST00000586588 FLNCQ14315 2725 aa9.39□□□□□ -0.91
DNMT1-207ENST00000586588 IGHV3-53P01767 116 aa9.39□□□□□ -0.91
DNMT1-207ENST00000586588 TRBV10-3A0A0K0K1G6 114 aa9.39□□□□□ -0.91
DNMT1-207ENST00000586588 C19orf84I3L1E1 186 aa9.39□□□□□ -0.91
DNMT1-207ENST00000586588 LYPD5Q6UWN5 251 aa9.39□□□□□ -0.91
DNMT1-207ENST00000586588 NCR3O14931 201 aa9.38□□□□□ -0.91
DNMT1-207ENST00000586588 IGLV1-40P01703 118 aa9.38□□□□□ -0.91
DNMT1-207ENST00000586588 SND1-IT1Q9HBX3 110 aa9.38□□□□□ -0.91
DNMT1-207ENST00000586588 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
DNMT1-207ENST00000586588 BCE1O60756 84 aa9.37□□□□□ -0.91
DNMT1-207ENST00000586588 KNCNA6PVL3 124 aa9.37□□□□□ -0.91
DNMT1-207ENST00000586588 XCL1P47992 114 aa9.37□□□□□ -0.91
DNMT1-207ENST00000586588 XCL2Q9UBD3 114 aa9.37□□□□□ -0.91
DNMT1-207ENST00000586588 LECT2O14960 151 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms