RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 C9orf47Q6ZRZ4 202 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 HIGD1BQ9P298 99 aa8.59□□□□□ -1.03
CDK5RAP3-231ENST00000584063 MYMXA0A1B0GTQ4 84 aa8.58□□□□□ -1.04
CDK5RAP3-231ENST00000584063 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
CDK5RAP3-231ENST00000584063 ZNF256Q9Y2P7 627 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
CDK5RAP3-231ENST00000584063 H7C2G1 150 aa8.58□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TCL1BO95988 128 aa8.58□□□□□ -1.04
CDK5RAP3-231ENST00000584063 PSMB2P49721 201 aa8.57□□□□□ -1.04
CDK5RAP3-231ENST00000584063 Q6ZRU5 148 aa8.57□□□□□ -1.04
CDK5RAP3-231ENST00000584063 C11orf68Q9H3H3 251 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-231ENST00000584063 OTOGQ6ZRI0 2925 aa8.57□□□□□ -1.04
CDK5RAP3-231ENST00000584063 LINC01546A6NGU7 62 aa8.57□□□□□ -1.04
CDK5RAP3-231ENST00000584063 PRM2P04554 102 aa8.57□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 IGHG2P01859 326 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 RNASE3P12724 160 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 PLNP26678 52 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 NEXN-AS1Q8NBZ9 246 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 DPH3P1Q9H4G8 78 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 RHPN1-AS1Q9BWJ2 59 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TRAV21A0A0B4J279 112 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 CYSTM1Q9H1C7 97 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 KLK9Q9UKQ9 250 aa8.56□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
CDK5RAP3-231ENST00000584063 SETXQ7Z333 2677 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-231ENST00000584063 IGHV3-73A0A0B4J1V6 119 aa8.55□□□□□ -1.04
CDK5RAP3-231ENST00000584063 SOCS3O14543 225 aa8.55□□□□□ -1.04
CDK5RAP3-231ENST00000584063 RBMY1CP0DJD4 496 aa8.55□□□□□ -1.04
CDK5RAP3-231ENST00000584063 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-231ENST00000584063 SS18Q15532 418 aa8.55□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TSHBP01222 138 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 COX7CP15954 63 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 KLK9Q2XQG4 91 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 DCANP1Q8TF63 244 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 SMR3AQ99954 134 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TEP1Q99973 2627 aaKnown RBP8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 ORMDL2Q53FV1 153 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TMEM190Q8WZ59 177 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 ZNF580Q9UK33 172 aa8.54□□□□□ -1.04
CDK5RAP3-231ENST00000584063 PSMB8P28062 276 aa8.53□□□□□ -1.04
CDK5RAP3-231ENST00000584063 RNASE13Q5GAN3 156 aaKnown RBP8.53□□□□□ -1.04
CDK5RAP3-231ENST00000584063 CFAP126Q5VTH2 177 aa8.53□□□□□ -1.04
CDK5RAP3-231ENST00000584063 TEN1Q86WV5 123 aa8.53□□□□□ -1.04
CDK5RAP3-231ENST00000584063 FAM223BA6NKX1 122 aa8.53□□□□□ -1.04
CDK5RAP3-231ENST00000584063 FAM223AQ8IWN6 122 aa8.53□□□□□ -1.04
CDK5RAP3-231ENST00000584063 RPL18AQ02543 176 aaKnown RBP8.52□□□□□ -1.05
CDK5RAP3-231ENST00000584063 SUMO4Q6EEV6 95 aa8.52□□□□□ -1.05
CDK5RAP3-231ENST00000584063 TRGV11A0A075B6L2 103 aa8.51□□□□□ -1.05
CDK5RAP3-231ENST00000584063 ZNF56Q15929 161 aa8.51□□□□□ -1.05
CDK5RAP3-231ENST00000584063 Q6YL49 198 aa8.51□□□□□ -1.05
CDK5RAP3-231ENST00000584063 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
CDK5RAP3-231ENST00000584063 IGHV4-4A0A075B6R2 117 aa8.51□□□□□ -1.05
CDK5RAP3-231ENST00000584063 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
CDK5RAP3-231ENST00000584063 NDUFA4O00483 81 aa8.51□□□□□ -1.05
CDK5RAP3-231ENST00000584063 PSMG4Q5JS54 123 aa8.51□□□□□ -1.05
CDK5RAP3-231ENST00000584063 SPINK13Q1W4C9 94 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 IGLV4-69A0A075B6H9 119 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 P0DMU3 169 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 FAM231AP0DMU4 169 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 FAM231CP0DMU5 169 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 NPC2P61916 151 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 SNRPD3P62318 126 aaKnown RBP8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 DEFB136Q30KP8 78 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 CEMP1Q6PRD7 247 aaPredicted RBP8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 PRR15Q8IV56 129 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 H3BT86 120 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 SCGB1C2P0DMR2 95 aa8.5□□□□□ -1.05
CDK5RAP3-231ENST00000584063 TRAV12-1A0A0B4J245 112 aa8.49□□□□□ -1.05
CDK5RAP3-231ENST00000584063 LGALS9O00182 355 aa8.49□□□□□ -1.05
CDK5RAP3-231ENST00000584063 LINC00315P59091 139 aa8.49□□□□□ -1.05
CDK5RAP3-231ENST00000584063 PROK1P58294 105 aa8.49□□□□□ -1.05
CDK5RAP3-231ENST00000584063 Q8N1Y9 231 aa8.49□□□□□ -1.05
CDK5RAP3-231ENST00000584063 USMG5Q96IX5 58 aa8.49□□□□□ -1.05
CDK5RAP3-231ENST00000584063 CRIP2P52943 208 aaPredicted RBP8.48□□□□□ -1.05
CDK5RAP3-231ENST00000584063 X6R8D5 127 aa8.48□□□□□ -1.05
CDK5RAP3-231ENST00000584063 TRAV2A0A0B4J234 112 aa8.48□□□□□ -1.05
CDK5RAP3-231ENST00000584063 IGLV1-40P01703 118 aa8.48□□□□□ -1.05
CDK5RAP3-231ENST00000584063 C18orf65Q6ZTR6 163 aa8.48□□□□□ -1.05
CDK5RAP3-231ENST00000584063 POM121L12Q8N7R1 296 aa8.48□□□□□ -1.05
CDK5RAP3-231ENST00000584063 A0A0J9YY99 117 aa8.47□□□□□ -1.05
CDK5RAP3-231ENST00000584063 FP248Q71RG6 208 aaPredicted RBP8.47□□□□□ -1.05
CDK5RAP3-231ENST00000584063 ODF3Q96PU9 254 aa8.47□□□□□ -1.05
CDK5RAP3-231ENST00000584063 OVOL2Q9BRP0 275 aa8.47□□□□□ -1.05
CDK5RAP3-231ENST00000584063 F8P00451 2351 aa8.47□□□□□ -1.05
CDK5RAP3-231ENST00000584063 SYNJ2BPP57105 145 aa8.47□□□□□ -1.05
CDK5RAP3-231ENST00000584063 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
CDK5RAP3-231ENST00000584063 ATRQ13535 2644 aa8.47□□□□□ -1.05
CDK5RAP3-231ENST00000584063 CFC1BP0CG36 223 aa8.46□□□□□ -1.05
CDK5RAP3-231ENST00000584063 CFC1P0CG37 223 aa8.46□□□□□ -1.05
CDK5RAP3-231ENST00000584063 ZNF702PQ9H963 129 aa8.46□□□□□ -1.05
CDK5RAP3-231ENST00000584063 IGIPA6NJ69 53 aa8.46□□□□□ -1.06
CDK5RAP3-231ENST00000584063 PRYO14603 147 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms