RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 ZNF563Q8TA94 476 aa2.98□□□□□ -1.93
ZEB1-210ENST00000557827 MYH8P13535 1937 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 MYH4Q9Y623 1939 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 GEMIN2O14893 280 aaKnown RBP2.97□□□□□ -1.93
ZEB1-210ENST00000557827 CCL25O15444 150 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 DNAL4O96015 105 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 FGF7P21781 194 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 SNRPFP62306 86 aaKnown RBP2.97□□□□□ -1.93
ZEB1-210ENST00000557827 ZNF720Q7Z2F6 126 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 VSTM2AQ8TAG5 236 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 LIMD2Q9BT23 127 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 SNRNP25Q9BV90 132 aaKnown RBP2.97□□□□□ -1.93
ZEB1-210ENST00000557827 ZFP30Q9Y2G7 519 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 PSME4Q14997 1843 aa2.97□□□□□ -1.93
ZEB1-210ENST00000557827 FLNAP21333 2647 aaKnown RBP2.97□□□□□ -1.93
ZEB1-210ENST00000557827 SPAARA0A1B0GVQ0 90 aa2.96□□□□□ -1.94
ZEB1-210ENST00000557827 INE1O15225 51 aa2.96□□□□□ -1.94
ZEB1-210ENST00000557827 PPYP01298 95 aa2.96□□□□□ -1.94
ZEB1-210ENST00000557827 SNURFQ9Y675 71 aa2.96□□□□□ -1.94
ZEB1-210ENST00000557827 LAMA5O15230 3695 aa2.96□□□□□ -1.94
ZEB1-210ENST00000557827 FRYLO94915 3013 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 RYR1P21817 5038 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 PDZD2O15018 2839 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 LOC110117498A0A087WWA1 95 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 F6UZH7 168 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 M0R2N4 97 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 LINC00299Q6ZSB3 139 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 DYNLRB2Q8TF09 96 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 MTORP42345 2549 aa2.95□□□□□ -1.94
ZEB1-210ENST00000557827 JMJD7-PLA2G4BH0Y9G9 81 aa2.94□□□□□ -1.94
ZEB1-210ENST00000557827 SCN3BQ9NY72 215 aa2.94□□□□□ -1.94
ZEB1-210ENST00000557827 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
ZEB1-210ENST00000557827 SDK1Q7Z5N4 2213 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 CSMD1Q96PZ7 3565 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 TRAV17A0A0B4J275 112 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 CCDC179H3BU77 68 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 AKAIN1P0CW23 69 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 IL7P13232 177 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 HIST1H1DP16402 221 aaKnown RBP2.93□□□□□ -1.94
ZEB1-210ENST00000557827 CSAG1Q6PB30 78 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 PP6455Q8WZ26 134 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 TMEM14CQ9P0S9 112 aa2.93□□□□□ -1.94
ZEB1-210ENST00000557827 SSC5DA1L4H1 1573 aa2.92□□□□□ -1.94
ZEB1-210ENST00000557827 TRAV2A0A0B4J234 112 aa2.92□□□□□ -1.94
ZEB1-210ENST00000557827 A0A0J9YY99 117 aa2.92□□□□□ -1.94
ZEB1-210ENST00000557827 IGKCP01834 107 aa2.92□□□□□ -1.94
ZEB1-210ENST00000557827 PRB4P10163 310 aaPredicted RBP2.92□□□□□ -1.94
ZEB1-210ENST00000557827 POLR2JP52435 117 aaKnown RBP2.92□□□□□ -1.94
ZEB1-210ENST00000557827 BTG2P78543 158 aa2.92□□□□□ -1.94
ZEB1-210ENST00000557827 RHOHQ15669 191 aa2.92□□□□□ -1.94
ZEB1-210ENST00000557827 UNQ6190/PRO20217Q6UXQ8 127 aa2.92□□□□□ -1.94
ZEB1-210ENST00000557827 LINC00322Q6ZN03 302 aaPredicted RBP2.92□□□□□ -1.94
ZEB1-210ENST00000557827 DOCK1Q14185 1865 aa2.92□□□□□ -1.94
ZEB1-210ENST00000557827 COL6A5A8TX70 2615 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 RYR3Q15413 4870 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 TMEM30CPA0ZSE6 113 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 ATP6V1G2-DDX39BF2Z307 99 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 CORTO00230 105 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 COPS9Q8WXC6 57 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 C12orf57Q99622 126 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 SEC11CQ9BY50 192 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 RERGLQ9H628 205 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 OTOGLQ3ZCN5 2332 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 PHIPQ8WWQ0 1821 aa2.91□□□□□ -1.94
ZEB1-210ENST00000557827 KLF7O75840 302 aaPredicted RBP2.9□□□□□ -1.95
ZEB1-210ENST00000557827 MRPS10P82664 201 aaKnown RBP2.9□□□□□ -1.95
ZEB1-210ENST00000557827 UNQ5815/PRO19632Q6UWF5 114 aa2.9□□□□□ -1.95
ZEB1-210ENST00000557827 AGPAT4-IT1Q9H0P7 198 aa2.9□□□□□ -1.95
ZEB1-210ENST00000557827 CYSTM1Q9H1C7 97 aa2.9□□□□□ -1.95
ZEB1-210ENST00000557827 DMXL2Q8TDJ6 3036 aa2.9□□□□□ -1.95
ZEB1-210ENST00000557827 USP9YO00507 2555 aaPredicted RBP2.9□□□□□ -1.95
ZEB1-210ENST00000557827 CRYBG3Q68DQ2 2970 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 CHD7Q9P2D1 2997 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 IGLV3-32A0A0A0MS00 114 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 IGKV3D-7A0A0C4DH55 119 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 IGKV3OR2-268A0A0C4DH90 116 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 IGLV3-1P01715 115 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 OR2T2Q6IF00 324 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 LYPD5Q6UWN5 251 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 PPDPFLQ8WWR9 84 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 WFDC10AQ9H1F0 79 aa2.89□□□□□ -1.95
ZEB1-210ENST00000557827 TRBV6-7A0A0A0MS04 114 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 IL5P05113 134 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 PIRTP0C851 137 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 TCEAL7Q9BRU2 100 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 NAA60Q9H7X0 242 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 BOKQ9UMX3 212 aaPredicted RBP2.88□□□□□ -1.95
ZEB1-210ENST00000557827 Q9Y3F1 56 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 SPENQ96T58 3664 aaKnown RBP2.88□□□□□ -1.95
ZEB1-210ENST00000557827 PARP14Q460N5 1801 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 ITPR2Q14571 2701 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 A0A0G2JMZ2 1700 aa2.88□□□□□ -1.95
ZEB1-210ENST00000557827 LRBAP50851 2863 aa2.87□□□□□ -1.95
ZEB1-210ENST00000557827 CHD9Q3L8U1 2897 aa2.87□□□□□ -1.95
ZEB1-210ENST00000557827 LOC285556D6RIA3 1793 aa2.87□□□□□ -1.95
ZEB1-210ENST00000557827 NUPR2A6NF83 97 aa2.87□□□□□ -1.95
ZEB1-210ENST00000557827 SNAPC5O75971 98 aa2.87□□□□□ -1.95
ZEB1-210ENST00000557827 IQCJQ1A5X6 159 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms