RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 TRAPPC2P0DI81 140 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 TRAPPC2BP0DI82 140 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 RNASE2P10153 161 aaKnown RBP1.8□□□□□ -2.12
FOXN3-217ENST00000557572 POLR2JP52435 117 aaKnown RBP1.8□□□□□ -2.12
FOXN3-217ENST00000557572 PDE6HQ13956 83 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 LY6EQ16553 131 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 CSAG1Q6PB30 78 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 ZNF431Q8TF32 576 aaPredicted RBP1.8□□□□□ -2.12
FOXN3-217ENST00000557572 S100A16Q96FQ6 103 aaKnown RBP1.8□□□□□ -2.12
FOXN3-217ENST00000557572 NDUFB11Q9NX14 153 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 SEC16AO15027 2179 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 ABCA2Q9BZC7 2435 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 PEAK1Q9H792 1746 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 DOCK2Q92608 1830 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 MYO18AQ92614 2054 aaKnown RBP1.79□□□□□ -2.12
FOXN3-217ENST00000557572 CREBBPQ92793 2442 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 CRYBG3Q68DQ2 2970 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 TRAV13-2A0A0B4J235 113 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 TRBV10-3A0A0K0K1G6 114 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 HCG22E2RYF7 251 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 ATOX1O00244 68 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 GNG11P61952 73 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 CNBPP62633 177 aaKnown RBP1.79□□□□□ -2.12
FOXN3-217ENST00000557572 SEC11AP67812 179 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 IGFBP7Q16270 282 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 C1orf137Q5JT78 98 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 RPL7L1Q6DKI1 246 aaKnown RBP1.79□□□□□ -2.12
FOXN3-217ENST00000557572 Q6ZTI0 123 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 LIMD2Q9BT23 127 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 UQCR10Q9UDW1 63 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 SLIT3O75094 1523 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 LMTK2Q8IWU2 1503 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 DUOX2Q9NRD8 1548 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 PIK3C2BO00750 1634 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 PAPPAQ13219 1627 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 ARFGEF1Q9Y6D6 1849 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 RP1P56715 2156 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 ZFHX3Q15911 3703 aa1.79□□□□□ -2.12
FOXN3-217ENST00000557572 DMXL2Q8TDJ6 3036 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 PKD1L1Q8TDX9 2849 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 NBEAL1Q6ZS30 2694 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 HEATR1Q9H583 2144 aaKnown RBP1.78□□□□□ -2.12
FOXN3-217ENST00000557572 MYH4Q9Y623 1939 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 LRCOL1A6NCL2 159 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 CCL8P80075 99 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 LYPD5Q6UWN5 251 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 C2orf82Q6UX34 121 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 LYPD1Q8N2G4 141 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 PPDPFLQ8WWR9 84 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 IFI27L1Q96BM0 104 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 ODF3Q96PU9 254 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 S100A13Q99584 98 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 CYTL1Q9NRR1 136 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 NF1P21359 2839 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 NIPBLQ6KC79 2804 aaeCLIP1.78□□□□□ -2.12
FOXN3-217ENST00000557572 IGSF10Q6WRI0 2623 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 NOTCH1P46531 2555 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 LRRK2Q5S007 2527 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 SPTBN2O15020 2390 aa1.78□□□□□ -2.12
FOXN3-217ENST00000557572 NINQ8N4C6 2090 aa1.78□□□□□ -2.13
FOXN3-217ENST00000557572 CEP192Q8TEP8 1941 aa1.78□□□□□ -2.13
FOXN3-217ENST00000557572 PARP4Q9UKK3 1724 aaKnown RBP1.77□□□□□ -2.13
FOXN3-217ENST00000557572 COL4A6Q14031 1691 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 CEP295Q9C0D2 2601 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 GVINP1Q7Z2Y8 2422 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 IGKV2D-24A0A075B6R9 120 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 CCL16O15467 120 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 APOC3P02656 99 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 SMIM5Q71RC9 77 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 SERP2Q8N6R1 65 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 MYOZ3Q8TDC0 251 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 CDC42SE1Q9NRR8 79 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 PDZD2O15018 2839 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 NAV3Q8IVL0 2385 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 CTTNBP2Q8WZ74 1663 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 CLTCL1P53675 1640 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 IQGAP3Q86VI3 1631 aa1.77□□□□□ -2.13
FOXN3-217ENST00000557572 MPDZO75970 2070 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 PRXQ9BXM0 1461 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 CHD7Q9P2D1 2997 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 TRBV7-1A0A0A6YYK4 115 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 TRAV12-3A0A0B4J271 114 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 TEX49A0A1B0GTD5 131 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 A0A1W2PNN7 141 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 NAP1L6A6NFF2 107 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 CRYM-AS1A6NIL9 109 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 A6NIN4 97 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 IGHV3-33P01772 117 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 OR10AG1Q8NH19 301 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 CMTM2Q8TAZ6 248 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 PATE1Q8WXA2 126 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 CACFD1Q9UGQ2 172 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 C22orf24Q9Y442 160 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 SPCS1Q9Y6A9 102 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 LTN1O94822 1766 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 COL4A2P08572 1712 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 SHANK1Q9Y566 2161 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 CR1P17927 2039 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 INO80Q9ULG1 1556 aaPredicted RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms