RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 IGLV3-9A0A075B6K5 115 aa6.64□□□□□ -1.35
GTF2A1-203ENST00000553612 M0R378 163 aa6.63□□□□□ -1.35
GTF2A1-203ENST00000553612 IGKV1-17P01599 117 aa6.63□□□□□ -1.35
GTF2A1-203ENST00000553612 SMIM11BQ8TCY0 68 aa6.63□□□□□ -1.35
GTF2A1-203ENST00000553612 TRIOBPQ9H2D6 2365 aa6.63□□□□□ -1.35
GTF2A1-203ENST00000553612 B3GALT5-AS1P59052 145 aa6.63□□□□□ -1.35
GTF2A1-203ENST00000553612 C3orf84H3BNL1 204 aa6.63□□□□□ -1.35
GTF2A1-203ENST00000553612 HIGD2BQ4VC39 106 aa6.63□□□□□ -1.35
GTF2A1-203ENST00000553612 ZNF833PQ6ZTB9 187 aa6.63□□□□□ -1.35
GTF2A1-203ENST00000553612 PCNX1Q96RV3 2341 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 COX6B1P14854 86 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 Q6ZTI0 123 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 IGHV4-59P01825 116 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 CXCL6P80162 114 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 IGLV3-32A0A0A0MS00 114 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 TRAV22A0A0B4J277 110 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 ATP6V0E1O15342 81 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 LYPD5Q6UWN5 251 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 BRD3OSQ6XYD6 125 aa6.62□□□□□ -1.35
GTF2A1-203ENST00000553612 Q0VFX4 171 aa6.61□□□□□ -1.35
GTF2A1-203ENST00000553612 BRWD3Q6RI45 1802 aa6.61□□□□□ -1.35
GTF2A1-203ENST00000553612 CDKN2A-AS1Q9UH64 79 aa6.61□□□□□ -1.35
GTF2A1-203ENST00000553612 FREM2Q5SZK8 3169 aa6.61□□□□□ -1.35
GTF2A1-203ENST00000553612 K7ENP7 123 aa6.61□□□□□ -1.35
GTF2A1-203ENST00000553612 PROK1P58294 105 aa6.61□□□□□ -1.35
GTF2A1-203ENST00000553612 C1orf158Q8N1D5 194 aa6.61□□□□□ -1.35
GTF2A1-203ENST00000553612 FAM218AQ96MZ4 157 aa6.61□□□□□ -1.35
GTF2A1-203ENST00000553612 DEFB130BP0DP73 79 aa6.6□□□□□ -1.35
GTF2A1-203ENST00000553612 DEFB130AP0DP74 79 aa6.6□□□□□ -1.35
GTF2A1-203ENST00000553612 LINC01547P58512 204 aaPredicted RBP6.6□□□□□ -1.35
GTF2A1-203ENST00000553612 IGFL3Q6UXB1 125 aa6.6□□□□□ -1.35
GTF2A1-203ENST00000553612 WFDC10AQ9H1F0 79 aa6.6□□□□□ -1.35
GTF2A1-203ENST00000553612 SPAG11BQ08648 103 aa6.6□□□□□ -1.35
GTF2A1-203ENST00000553612 VMO1Q7Z5L0 202 aa6.59□□□□□ -1.35
GTF2A1-203ENST00000553612 Q8N2B8 174 aa6.59□□□□□ -1.35
GTF2A1-203ENST00000553612 PRAC1Q96KF2 57 aa6.59□□□□□ -1.35
GTF2A1-203ENST00000553612 COL16A1Q07092 1604 aaPredicted RBP6.59□□□□□ -1.35
GTF2A1-203ENST00000553612 ZDBF2Q9HCK1 2354 aa6.59□□□□□ -1.35
GTF2A1-203ENST00000553612 DEFB121Q5J5C9 76 aa6.59□□□□□ -1.35
GTF2A1-203ENST00000553612 PRSS33Q8NF86 280 aa6.59□□□□□ -1.35
GTF2A1-203ENST00000553612 IGLV4-3A0A075B6K6 122 aa6.59□□□□□ -1.36
GTF2A1-203ENST00000553612 DEFB131AP59861 70 aa6.59□□□□□ -1.36
GTF2A1-203ENST00000553612 WFDC10BQ8IUB3 73 aa6.59□□□□□ -1.36
GTF2A1-203ENST00000553612 CEP350Q5VT06 3117 aa6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 I3L2K1 104 aa6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 CDH23Q9H251 3354 aa6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 NAV3Q8IVL0 2385 aa6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 K7EIM0 57 aa6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 RNASE3P12724 160 aaKnown RBP6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 BBC3Q96PG8 261 aaPredicted RBP6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 PRM2P04554 102 aa6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 C20orf203Q8NBC4 194 aa6.58□□□□□ -1.36
GTF2A1-203ENST00000553612 LHBP01229 141 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 TMEM30BQ3MIR4 351 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 CD164L2Q6UWJ8 174 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 NPBQ8NG41 125 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 C11orf21Q9P2W6 132 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 ZNF843Q8N446 348 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 THSD7AQ9UPZ6 1657 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 CREBBPQ92793 2442 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 CD59P13987 128 aa6.57□□□□□ -1.36
GTF2A1-203ENST00000553612 PCSK5Q92824 1860 aa6.56□□□□□ -1.36
GTF2A1-203ENST00000553612 IGLV2-18A0A075B6J9 118 aa6.56□□□□□ -1.36
GTF2A1-203ENST00000553612 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
GTF2A1-203ENST00000553612 UNQ9165/PRO28630Q6UXU0 137 aa6.56□□□□□ -1.36
GTF2A1-203ENST00000553612 PRR26Q8N8Z3 221 aa6.56□□□□□ -1.36
GTF2A1-203ENST00000553612 TRBV6-5A0A0K0K1A5 114 aa6.56□□□□□ -1.36
GTF2A1-203ENST00000553612 IGHV4-30-4P0DP06 118 aa6.55□□□□□ -1.36
GTF2A1-203ENST00000553612 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
GTF2A1-203ENST00000553612 PTPRQQ9UMZ3 2332 aa6.55□□□□□ -1.36
GTF2A1-203ENST00000553612 TET2Q6N021 2002 aaPredicted RBP6.55□□□□□ -1.36
GTF2A1-203ENST00000553612 DEFB116Q30KQ4 102 aa6.55□□□□□ -1.36
GTF2A1-203ENST00000553612 TMEM105Q8N8V8 129 aa6.55□□□□□ -1.36
GTF2A1-203ENST00000553612 WFDC13Q8IUB5 93 aa6.55□□□□□ -1.36
GTF2A1-203ENST00000553612 PRR3P79522 188 aaKnown RBP6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 NBASA2RRP1 2371 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 NDUFA1O15239 70 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 SYCNQ0VAF6 134 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 C1orf64Q8NEQ6 169 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 DEFB124Q8NES8 71 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 XIRP2A4UGR9 3374 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 IGIPA6NJ69 53 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 C19orf84I3L1E1 186 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 LIMD2Q9BT23 127 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 C2CD3Q4AC94 2353 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 ATRXP46100 2492 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 COL5A1P20908 1838 aaPredicted RBP6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 C6orf99Q4VX62 202 aa6.54□□□□□ -1.36
GTF2A1-203ENST00000553612 IGLV2-23P01705 113 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 DSCAMO60469 2012 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 FSHBP01225 129 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 DEFB136Q30KP8 78 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 Q6ZRU5 148 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 MKI67P46013 3256 aaKnown RBP6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 SPAG11AQ6PDA7 123 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 LINC00208Q96KT6 92 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 TSHBP01222 138 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 KLKP1Q107X0 134 aa6.53□□□□□ -1.36
GTF2A1-203ENST00000553612 EIF4EBP1Q13541 118 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms