RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 LRRC37A2A6NM11 1700 aa-0.55□□□□□ -2.5
GPN3-209ENST00000551079 KDM5AP29375 1690 aaKnown RBP-0.56□□□□□ -2.5
GPN3-209ENST00000551079 ROBO1Q9Y6N7 1651 aa-0.56□□□□□ -2.5
GPN3-209ENST00000551079 TCHHQ07283 1943 aa-0.56□□□□□ -2.5
GPN3-209ENST00000551079 MAP1AP78559 2803 aaPredicted RBP-0.56□□□□□ -2.5
GPN3-209ENST00000551079 CTXND1A0A1B0GTU2 59 aa-0.56□□□□□ -2.5
GPN3-209ENST00000551079 SPAARA0A1B0GVQ0 90 aa-0.56□□□□□ -2.5
GPN3-209ENST00000551079 GUCA1AP43080 201 aaPredicted RBP-0.56□□□□□ -2.5
GPN3-209ENST00000551079 TSLPQ969D9 159 aa-0.56□□□□□ -2.5
GPN3-209ENST00000551079 TP53AIP1Q9HCN2 124 aa-0.56□□□□□ -2.5
GPN3-209ENST00000551079 SMIM6P0DI80 62 aa-0.57□□□□□ -2.5
GPN3-209ENST00000551079 SPAG11AQ6PDA7 123 aa-0.57□□□□□ -2.5
GPN3-209ENST00000551079 TTC9CQ8N5M4 171 aa-0.57□□□□□ -2.5
GPN3-209ENST00000551079 AMELXQ99217 191 aa-0.57□□□□□ -2.5
GPN3-209ENST00000551079 PDCD10Q9BUL8 212 aa-0.57□□□□□ -2.5
GPN3-209ENST00000551079 SPCS1Q9Y6A9 102 aa-0.57□□□□□ -2.5
GPN3-209ENST00000551079 GRIN2AQ12879 1464 aa-0.57□□□□□ -2.5
GPN3-209ENST00000551079 PRKDCP78527 4128 aaKnown RBP-0.57□□□□□ -2.5
GPN3-209ENST00000551079 RIMS1Q86UR5 1692 aaKnown RBP-0.58□□□□□ -2.5
GPN3-209ENST00000551079 SMCO1Q147U7 214 aa-0.58□□□□□ -2.5
GPN3-209ENST00000551079 KRTAP19-7Q3SYF9 63 aa-0.58□□□□□ -2.5
GPN3-209ENST00000551079 TMEM191AQ9H0A3 160 aa-0.58□□□□□ -2.5
GPN3-209ENST00000551079 R4GMQ9 66 aa-0.58□□□□□ -2.5
GPN3-209ENST00000551079 V9GYH0 126 aa-0.58□□□□□ -2.5
GPN3-209ENST00000551079 SHROOM2Q13796 1616 aa-0.58□□□□□ -2.5
GPN3-209ENST00000551079 Q6JHZ5 121 aa-0.59□□□□□ -2.5
GPN3-209ENST00000551079 NDUFA4L2Q9NRX3 87 aa-0.59□□□□□ -2.5
GPN3-209ENST00000551079 ARHGEF5Q12774 1597 aa-0.59□□□□□ -2.5
GPN3-209ENST00000551079 CFTRP13569 1480 aa-0.6□□□□□ -2.5
GPN3-209ENST00000551079 PPIP5K1Q6PFW1 1433 aa-0.6□□□□□ -2.51
GPN3-209ENST00000551079 LOC100130705A0A1B0GUX0 176 aa-0.6□□□□□ -2.51
GPN3-209ENST00000551079 K7EQZ3 153 aa-0.6□□□□□ -2.51
GPN3-209ENST00000551079 GNG7O60262 68 aa-0.6□□□□□ -2.51
GPN3-209ENST00000551079 LENEPQ9Y5L5 61 aa-0.6□□□□□ -2.51
GPN3-209ENST00000551079 TRBV6-1A0A0K0K1D8 114 aa-0.61□□□□□ -2.51
GPN3-209ENST00000551079 SPRR1BP22528 89 aa-0.61□□□□□ -2.51
GPN3-209ENST00000551079 ARPC4P59998 168 aa-0.61□□□□□ -2.51
GPN3-209ENST00000551079 TMEM170BQ5T4T1 132 aa-0.61□□□□□ -2.51
GPN3-209ENST00000551079 AQP10Q96PS8 301 aa-0.61□□□□□ -2.51
GPN3-209ENST00000551079 MBD5Q9P267 1494 aa-0.61□□□□□ -2.51
GPN3-209ENST00000551079 STAB2Q8WWQ8 2551 aa-0.61□□□□□ -2.51
GPN3-209ENST00000551079 QRICH2Q9H0J4 1663 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 IGLC7A0M8Q6 106 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 Q6AWC8 147 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 SMIM4Q8WVI0 70 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 TCEAL4Q96EI5 215 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 PFDN5Q99471 154 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 CCDC167Q9P0B6 97 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 LINC00474Q9P2X8 69 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 SERP1Q9Y6X1 66 aa-0.62□□□□□ -2.51
GPN3-209ENST00000551079 KMT2CQ8NEZ4 4911 aaKnown RBP-0.62□□□□□ -2.51
GPN3-209ENST00000551079 MEIG1Q5JSS6 88 aa-0.63□□□□□ -2.51
GPN3-209ENST00000551079 SCN7AQ01118 1682 aa-0.63□□□□□ -2.51
GPN3-209ENST00000551079 NBEAL1Q6ZS30 2694 aa-0.63□□□□□ -2.51
GPN3-209ENST00000551079 NSD3Q9BZ95 1437 aa-0.64□□□□□ -2.51
GPN3-209ENST00000551079 ZFHX3Q15911 3703 aa-0.64□□□□□ -2.51
GPN3-209ENST00000551079 TET3O43151 1660 aa-0.64□□□□□ -2.51
GPN3-209ENST00000551079 MIF4GDA9UHW6 222 aaKnown RBP-0.64□□□□□ -2.51
GPN3-209ENST00000551079 F8VRH5 84 aa-0.64□□□□□ -2.51
GPN3-209ENST00000551079 NDUFA2O43678 99 aa-0.64□□□□□ -2.51
GPN3-209ENST00000551079 SPRR2BP35325 72 aa-0.64□□□□□ -2.51
GPN3-209ENST00000551079 DCDP81605 110 aaKnown RBP-0.64□□□□□ -2.51
GPN3-209ENST00000551079 BAGE2Q86Y30 109 aa-0.64□□□□□ -2.51
GPN3-209ENST00000551079 TRBV7-3A0A075B6L6 115 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 HMGN4O00479 90 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 KLK9Q2XQG4 91 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 LINC00470Q9BZP3 86 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 RERGLQ9H628 205 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 ARHGEF12Q9NZN5 1544 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 SVEP1Q4LDE5 3571 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 CPSF1Q10570 1443 aaKnown RBP-0.65□□□□□ -2.51
GPN3-209ENST00000551079 PCLOQ9Y6V0 5065 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 MYOM1P52179 1685 aa-0.65□□□□□ -2.51
GPN3-209ENST00000551079 PDZD2O15018 2839 aa-0.66□□□□□ -2.51
GPN3-209ENST00000551079 LINC01558Q9Y6Z2 57 aa-0.66□□□□□ -2.52
GPN3-209ENST00000551079 CUL7Q14999 1698 aa-0.66□□□□□ -2.52
GPN3-209ENST00000551079 NEBP20929 6669 aa-0.66□□□□□ -2.52
GPN3-209ENST00000551079 FAM25AB3EWG3 89 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 FAM25CB3EWG5 89 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 FAM25GB3EWG6 89 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 UQCR11O14957 56 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 CATR1Q13166 79 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 ARL11Q969Q4 196 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 MGST2Q99735 147 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 SNRNP25Q9BV90 132 aaKnown RBP-0.67□□□□□ -2.52
GPN3-209ENST00000551079 DYNLRB1Q9NP97 96 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 WDR7Q9Y4E6 1490 aa-0.67□□□□□ -2.52
GPN3-209ENST00000551079 PKHD1P08F94 4074 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 TNFP01375 233 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 COX6B1P14854 86 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 COX17Q14061 63 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 PIGYQ3MUY2 71 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 C12orf73Q69YU5 71 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 LCN9Q8WX39 176 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 FXYD6Q9H0Q3 95 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 FMN2Q9NZ56 1722 aa-0.68□□□□□ -2.52
GPN3-209ENST00000551079 FLGP20930 4061 aaPredicted RBP-0.69□□□□□ -2.52
GPN3-209ENST00000551079 OOSP1A8MZH6 123 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 LOC730098B7Z3J9 87 aa-0.69□□□□□ -2.52
GPN3-209ENST00000551079 S100A3P33764 101 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms