RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TIRAPP58753 221 aa16.85■□□□□ 0.29
FOXA1-202ENST00000545425 KHDC1LQ5JSQ8 128 aa16.84■□□□□ 0.29
FOXA1-202ENST00000545425 CUBNO60494 3623 aa16.84■□□□□ 0.29
FOXA1-202ENST00000545425 IGHV3-73A0A0B4J1V6 119 aa16.84■□□□□ 0.29
FOXA1-202ENST00000545425 FHL3Q13643 280 aa16.84■□□□□ 0.29
FOXA1-202ENST00000545425 TEN1Q86WV5 123 aa16.84■□□□□ 0.29
FOXA1-202ENST00000545425 PPDPFLQ8WWR9 84 aa16.84■□□□□ 0.29
FOXA1-202ENST00000545425 VSIG2Q96IQ7 327 aa16.84■□□□□ 0.29
FOXA1-202ENST00000545425 TRBV10-1A0A0K0K1A3 114 aa16.83■□□□□ 0.28
FOXA1-202ENST00000545425 SCGB1C2P0DMR2 95 aa16.83■□□□□ 0.28
FOXA1-202ENST00000545425 MUSTN1Q8IVN3 82 aa16.83■□□□□ 0.28
FOXA1-202ENST00000545425 TCL1BO95988 128 aa16.82■□□□□ 0.28
FOXA1-202ENST00000545425 SMCPP49901 116 aaPredicted RBP16.82■□□□□ 0.28
FOXA1-202ENST00000545425 PROK1P58294 105 aa16.82■□□□□ 0.28
FOXA1-202ENST00000545425 IL17DQ8TAD2 202 aa16.82■□□□□ 0.28
FOXA1-202ENST00000545425 IGLV5-45A0A087WSX0 123 aa16.82■□□□□ 0.28
FOXA1-202ENST00000545425 STHQ8IWL8 128 aa16.82■□□□□ 0.28
FOXA1-202ENST00000545425 ZNF418Q8TF45 676 aaPredicted RBP16.82■□□□□ 0.28
FOXA1-202ENST00000545425 LINC01600Q96MT4 127 aa16.82■□□□□ 0.28
FOXA1-202ENST00000545425 IFITM1P13164 125 aa16.81■□□□□ 0.28
FOXA1-202ENST00000545425 Q6ZSV7 163 aa16.81■□□□□ 0.28
FOXA1-202ENST00000545425 ZFAND6Q6FIF0 208 aa16.8■□□□□ 0.28
FOXA1-202ENST00000545425 GEMIN7Q9H840 131 aaKnown RBP16.8■□□□□ 0.28
FOXA1-202ENST00000545425 NDUFA12Q9UI09 145 aa16.8■□□□□ 0.28
FOXA1-202ENST00000545425 CIDEAO60543 219 aa16.8■□□□□ 0.28
FOXA1-202ENST00000545425 KRTAP24-1Q3LI83 254 aa16.8■□□□□ 0.28
FOXA1-202ENST00000545425 Q6ZSN1 163 aa16.8■□□□□ 0.28
FOXA1-202ENST00000545425 FAM19A3Q7Z5A8 133 aa16.8■□□□□ 0.28
FOXA1-202ENST00000545425 CSDC2Q9Y534 153 aaKnown RBP16.8■□□□□ 0.28
FOXA1-202ENST00000545425 LITAFQ99732 161 aa16.79■□□□□ 0.28
FOXA1-202ENST00000545425 TRBV30A0A0K0K1B3 111 aa16.78■□□□□ 0.28
FOXA1-202ENST00000545425 MIAQ16674 131 aa16.78■□□□□ 0.28
FOXA1-202ENST00000545425 ODF3L2Q3SX64 289 aa16.78■□□□□ 0.28
FOXA1-202ENST00000545425 FAM110AQ9BQ89 295 aa16.77■□□□□ 0.28
FOXA1-202ENST00000545425 STAB1Q9NY15 2570 aa16.77■□□□□ 0.28
FOXA1-202ENST00000545425 AZU1P20160 251 aa16.77■□□□□ 0.27
FOXA1-202ENST00000545425 IGHV3-64A0A075B6Q5 118 aa16.76■□□□□ 0.27
FOXA1-202ENST00000545425 DAZ2Q13117 558 aaKnown RBP16.76■□□□□ 0.27
FOXA1-202ENST00000545425 ATXN8Q156A1 80 aa16.76■□□□□ 0.27
FOXA1-202ENST00000545425 DAZ4Q86SG3 579 aaKnown RBP16.76■□□□□ 0.27
FOXA1-202ENST00000545425 COPS9Q8WXC6 57 aa16.76■□□□□ 0.27
FOXA1-202ENST00000545425 DAZ3Q9NR90 486 aaKnown RBP16.76■□□□□ 0.27
FOXA1-202ENST00000545425 NACAE9PAV3 2078 aa16.76■□□□□ 0.27
FOXA1-202ENST00000545425 HILS1P60008 231 aa16.75■□□□□ 0.27
FOXA1-202ENST00000545425 HERVK_113P63121 156 aa16.75■□□□□ 0.27
FOXA1-202ENST00000545425 DGAT2L7PQ6IED9 249 aa16.75■□□□□ 0.27
FOXA1-202ENST00000545425 Q6ZUT4 128 aa16.75■□□□□ 0.27
FOXA1-202ENST00000545425 RPL36AP83881 106 aaKnown RBP16.75■□□□□ 0.27
FOXA1-202ENST00000545425 MTURNQ8N3F0 131 aa16.75■□□□□ 0.27
FOXA1-202ENST00000545425 RPL36ALQ969Q0 106 aaKnown RBP16.75■□□□□ 0.27
FOXA1-202ENST00000545425 DNHD1Q96M86 4753 aa16.74■□□□□ 0.27
FOXA1-202ENST00000545425 TRAV4A0A0B4J268 109 aa16.74■□□□□ 0.27
FOXA1-202ENST00000545425 DNAJC9-AS1A6NH13 148 aa16.74■□□□□ 0.27
FOXA1-202ENST00000545425 CCL24O00175 119 aa16.74■□□□□ 0.27
FOXA1-202ENST00000545425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.73■□□□□ 0.27
FOXA1-202ENST00000545425 IGKV2-29A2NJV5 120 aaPredicted RBP16.73■□□□□ 0.27
FOXA1-202ENST00000545425 NDUFA1O15239 70 aa16.73■□□□□ 0.27
FOXA1-202ENST00000545425 C1orf158Q8N1D5 194 aa16.73■□□□□ 0.27
FOXA1-202ENST00000545425 TMEM262E9PQX1 116 aa16.73■□□□□ 0.27
FOXA1-202ENST00000545425 CIRBPQ14011 172 aaKnown RBP16.73■□□□□ 0.27
FOXA1-202ENST00000545425 CEMP1Q6PRD7 247 aaPredicted RBP16.73■□□□□ 0.27
FOXA1-202ENST00000545425 GTSF1LQ9H1H1 148 aa16.73■□□□□ 0.27
FOXA1-202ENST00000545425 XCL2Q9UBD3 114 aa16.72■□□□□ 0.27
FOXA1-202ENST00000545425 TRAV8-3A0A0A6YYJ7 113 aa16.71■□□□□ 0.27
FOXA1-202ENST00000545425 EIF4EBP3O60516 100 aaPredicted RBP16.71■□□□□ 0.27
FOXA1-202ENST00000545425 COX6CP09669 75 aa16.71■□□□□ 0.27
FOXA1-202ENST00000545425 Q1RN00 199 aa16.71■□□□□ 0.27
FOXA1-202ENST00000545425 PPDPFQ9H3Y8 114 aa16.71■□□□□ 0.27
FOXA1-202ENST00000545425 K7EQD1 137 aa16.7■□□□□ 0.26
FOXA1-202ENST00000545425 SLC25A20O43772 301 aa16.7■□□□□ 0.26
FOXA1-202ENST00000545425 SFTA2Q6UW10 78 aa16.7■□□□□ 0.26
FOXA1-202ENST00000545425 C16orf95Q9H693 158 aa16.7■□□□□ 0.26
FOXA1-202ENST00000545425 IGLV5-39A0A0G2JS06 123 aa16.69■□□□□ 0.26
FOXA1-202ENST00000545425 INSL3P51460 131 aa16.69■□□□□ 0.26
FOXA1-202ENST00000545425 TRGV1A0A0A0MS02 117 aa16.68■□□□□ 0.26
FOXA1-202ENST00000545425 H7C423 109 aa16.68■□□□□ 0.26
FOXA1-202ENST00000545425 PRM2P04554 102 aa16.68■□□□□ 0.26
FOXA1-202ENST00000545425 SPINK8P0C7L1 97 aa16.68■□□□□ 0.26
FOXA1-202ENST00000545425 PRSS2P07478 247 aa16.68■□□□□ 0.26
FOXA1-202ENST00000545425 Q9UF83 564 aa16.67■□□□□ 0.26
FOXA1-202ENST00000545425 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.66■□□□□ 0.26
FOXA1-202ENST00000545425 C16orf74Q96GX8 76 aa16.66■□□□□ 0.26
FOXA1-202ENST00000545425 IGHV3-38A0A0C4DH36 116 aa16.66■□□□□ 0.26
FOXA1-202ENST00000545425 LINC01620Q4KN68 170 aa16.66■□□□□ 0.26
FOXA1-202ENST00000545425 RNASE13Q5GAN3 156 aaKnown RBP16.66■□□□□ 0.26
FOXA1-202ENST00000545425 ANKRD29Q8N6D5 301 aa16.66■□□□□ 0.26
FOXA1-202ENST00000545425 CARD19Q96LW7 228 aa16.66■□□□□ 0.26
FOXA1-202ENST00000545425 CDKN2A-AS1Q9UH64 79 aa16.66■□□□□ 0.26
FOXA1-202ENST00000545425 SORL1Q92673 2214 aa16.65■□□□□ 0.26
FOXA1-202ENST00000545425 C9JAW5 83 aa16.65■□□□□ 0.26
FOXA1-202ENST00000545425 TMEM101Q96IK0 257 aa16.65■□□□□ 0.26
FOXA1-202ENST00000545425 TRBV10-2A0A0K0K1G8 114 aa16.64■□□□□ 0.25
FOXA1-202ENST00000545425 ESM1Q9NQ30 184 aa16.64■□□□□ 0.25
FOXA1-202ENST00000545425 ICOSQ9Y6W8 199 aa16.64■□□□□ 0.25
FOXA1-202ENST00000545425 IGHV3OR16-12A0A075B7B8 117 aa16.63■□□□□ 0.25
FOXA1-202ENST00000545425 ADAMTSL4-AS1Q5T5F5 129 aa16.63■□□□□ 0.25
FOXA1-202ENST00000545425 CDIP1Q9H305 208 aa16.63■□□□□ 0.25
FOXA1-202ENST00000545425 ADARB2-AS1A8MUL3 147 aa16.63■□□□□ 0.25
FOXA1-202ENST00000545425 RNASE1P07998 156 aaKnown RBP16.63■□□□□ 0.25
FOXA1-202ENST00000545425 RPL13AP40429 203 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms