RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 TRAV22A0A0B4J277 110 aa-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 C10orf142B7Z368 130 aa-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 CFDP00746 253 aaPredicted RBP-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 IFNGP01579 166 aa-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 COMMD6Q7Z4G1 85 aa-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 LINC00472Q9H8W2 130 aa-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 RIMS1Q86UR5 1692 aaKnown RBP-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 WNK3Q9BYP7 1800 aa-0.06□□□□□ -2.42
LEMD3-206ENST00000545026 MYOM1P52179 1685 aa-0.07□□□□□ -2.42
LEMD3-206ENST00000545026 KIF21AQ7Z4S6 1674 aa-0.07□□□□□ -2.42
LEMD3-206ENST00000545026 OOSP1A8MZH6 123 aa-0.07□□□□□ -2.42
LEMD3-206ENST00000545026 F8VRH5 84 aa-0.07□□□□□ -2.42
LEMD3-206ENST00000545026 M0R3E3 92 aa-0.07□□□□□ -2.42
LEMD3-206ENST00000545026 SSSCA1O60232 199 aa-0.07□□□□□ -2.42
LEMD3-206ENST00000545026 COX17Q14061 63 aa-0.07□□□□□ -2.42
LEMD3-206ENST00000545026 SPCS1Q9Y6A9 102 aa-0.07□□□□□ -2.42
LEMD3-206ENST00000545026 PLXNB2O15031 1838 aa-0.08□□□□□ -2.42
LEMD3-206ENST00000545026 FLNCQ14315 2725 aa-0.08□□□□□ -2.42
LEMD3-206ENST00000545026 WFDC2Q14508 124 aa-0.08□□□□□ -2.42
LEMD3-206ENST00000545026 TMEM170BQ5T4T1 132 aa-0.08□□□□□ -2.42
LEMD3-206ENST00000545026 BAGE2Q86Y30 109 aa-0.08□□□□□ -2.42
LEMD3-206ENST00000545026 LPAP08519 4548 aa-0.08□□□□□ -2.42
LEMD3-206ENST00000545026 KTN1Q86UP2 1357 aaKnown RBP-0.08□□□□□ -2.42
LEMD3-206ENST00000545026 PPRC1Q5VV67 1664 aaKnown RBP-0.08□□□□□ -2.42
LEMD3-206ENST00000545026 UQCR11O14957 56 aa-0.09□□□□□ -2.42
LEMD3-206ENST00000545026 Q5VSD8 79 aa-0.09□□□□□ -2.42
LEMD3-206ENST00000545026 LINC00474Q9P2X8 69 aa-0.09□□□□□ -2.42
LEMD3-206ENST00000545026 CUL7Q14999 1698 aa-0.09□□□□□ -2.42
LEMD3-206ENST00000545026 PLCE1Q9P212 2302 aa-0.09□□□□□ -2.42
LEMD3-206ENST00000545026 RAPGEF6Q8TEU7 1601 aa-0.09□□□□□ -2.42
LEMD3-206ENST00000545026 NALCNQ8IZF0 1738 aa-0.1□□□□□ -2.42
LEMD3-206ENST00000545026 EIF4G3O43432 1585 aaKnown RBP-0.1□□□□□ -2.42
LEMD3-206ENST00000545026 SBF2Q86WG5 1849 aa-0.1□□□□□ -2.43
LEMD3-206ENST00000545026 A0A1B0GV90 55 aa-0.1□□□□□ -2.43
LEMD3-206ENST00000545026 S100A3P33764 101 aa-0.1□□□□□ -2.43
LEMD3-206ENST00000545026 MRPL54Q6P161 138 aaKnown RBP-0.1□□□□□ -2.43
LEMD3-206ENST00000545026 PTPN13Q12923 2485 aa-0.1□□□□□ -2.43
LEMD3-206ENST00000545026 ERCC6L2Q5T890 1561 aa-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 HMCN2Q8NDA2 5059 aa-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 IGLC7A0M8Q6 106 aa-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 HMGN4O00479 90 aa-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 DLEU1O43261 78 aa-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 TNFP01375 233 aa-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 TPPP2P59282 170 aa-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 Q8IZM0 81 aa-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 NSD1Q96L73 2696 aaPredicted RBP-0.11□□□□□ -2.43
LEMD3-206ENST00000545026 SMG6Q86US8 1419 aaKnown RBP-0.12□□□□□ -2.43
LEMD3-206ENST00000545026 PAPPAQ13219 1627 aa-0.12□□□□□ -2.43
LEMD3-206ENST00000545026 APOC3P02656 99 aa-0.12□□□□□ -2.43
LEMD3-206ENST00000545026 C9orf153Q5TBE3 101 aa-0.12□□□□□ -2.43
LEMD3-206ENST00000545026 LINC01558Q9Y6Z2 57 aa-0.12□□□□□ -2.43
LEMD3-206ENST00000545026 ARHGEF5Q12774 1597 aa-0.12□□□□□ -2.43
LEMD3-206ENST00000545026 DIP2CQ9Y2E4 1556 aa-0.12□□□□□ -2.43
LEMD3-206ENST00000545026 ROBO1Q9Y6N7 1651 aa-0.12□□□□□ -2.43
LEMD3-206ENST00000545026 CHD6Q8TD26 2715 aa-0.13□□□□□ -2.43
LEMD3-206ENST00000545026 SARNPP82979 210 aaKnown RBP-0.13□□□□□ -2.43
LEMD3-206ENST00000545026 DEFB109BQ30KR1 87 aa-0.13□□□□□ -2.43
LEMD3-206ENST00000545026 TET3O43151 1660 aa-0.14□□□□□ -2.43
LEMD3-206ENST00000545026 MYOM2P54296 1465 aa-0.14□□□□□ -2.43
LEMD3-206ENST00000545026 LOC285095A0A1B0GVY8 99 aa-0.14□□□□□ -2.43
LEMD3-206ENST00000545026 I3L2K1 104 aa-0.14□□□□□ -2.43
LEMD3-206ENST00000545026 Q6JHZ5 121 aa-0.14□□□□□ -2.43
LEMD3-206ENST00000545026 TP53AIP1Q9HCN2 124 aa-0.14□□□□□ -2.43
LEMD3-206ENST00000545026 C10orf71Q711Q0 1435 aa-0.14□□□□□ -2.43
LEMD3-206ENST00000545026 PKDREJQ9NTG1 2253 aa-0.15□□□□□ -2.43
LEMD3-206ENST00000545026 DOPEY2Q9Y3R5 2298 aa-0.15□□□□□ -2.43
LEMD3-206ENST00000545026 SHANK2Q9UPX8 1470 aa-0.15□□□□□ -2.43
LEMD3-206ENST00000545026 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
LEMD3-206ENST00000545026 DCDP81605 110 aaKnown RBP-0.15□□□□□ -2.43
LEMD3-206ENST00000545026 KMT2AQ03164 3969 aa-0.15□□□□□ -2.43
LEMD3-206ENST00000545026 TENM4Q6N022 2769 aa-0.16□□□□□ -2.43
LEMD3-206ENST00000545026 EHBP1L1Q8N3D4 1523 aa-0.16□□□□□ -2.43
LEMD3-206ENST00000545026 SNAPC5O75971 98 aa-0.16□□□□□ -2.44
LEMD3-206ENST00000545026 SPRR2DP22532 72 aa-0.16□□□□□ -2.44
LEMD3-206ENST00000545026 ATP5EP56381 51 aaPredicted RBP-0.16□□□□□ -2.44
LEMD3-206ENST00000545026 PIGYQ3MUY2 71 aa-0.16□□□□□ -2.44
LEMD3-206ENST00000545026 MYOZ3Q8TDC0 251 aa-0.16□□□□□ -2.44
LEMD3-206ENST00000545026 NRKQ7Z2Y5 1582 aa-0.16□□□□□ -2.44
LEMD3-206ENST00000545026 HSPG2P98160 4391 aa-0.16□□□□□ -2.44
LEMD3-206ENST00000545026 MRC2Q9UBG0 1479 aa-0.16□□□□□ -2.44
LEMD3-206ENST00000545026 FLNAP21333 2647 aaKnown RBP-0.17□□□□□ -2.44
LEMD3-206ENST00000545026 ARHGEF12Q9NZN5 1544 aa-0.17□□□□□ -2.44
LEMD3-206ENST00000545026 SPRR1AP35321 89 aa-0.17□□□□□ -2.44
LEMD3-206ENST00000545026 MUC12Q9UKN1 5478 aa-0.17□□□□□ -2.44
LEMD3-206ENST00000545026 GAPVD1Q14C86 1478 aa-0.17□□□□□ -2.44
LEMD3-206ENST00000545026 WDR7Q9Y4E6 1490 aa-0.17□□□□□ -2.44
LEMD3-206ENST00000545026 MAPKBP1O60336 1514 aa-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 TULP4Q9NRJ4 1543 aa-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 STAB1Q9NY15 2570 aa-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 TRBV6-1A0A0K0K1D8 114 aa-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 UBE2L5PA0A1B0GUS4 154 aa-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 UBE2L3P68036 154 aaKnown RBP-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 KRTAP6-1Q3LI64 71 aa-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 MAGI1Q96QZ7 1491 aaPredicted RBP-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 KDM5AP29375 1690 aaKnown RBP-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 FAM135AQ9P2D6 1515 aa-0.18□□□□□ -2.44
LEMD3-206ENST00000545026 LRP2P98164 4655 aa-0.19□□□□□ -2.44
LEMD3-206ENST00000545026 ZANQ9Y493 2812 aa-0.19□□□□□ -2.44
LEMD3-206ENST00000545026 SFT2D2O95562 160 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms