RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 CCDC168Q8NDH2 2452 aa6.36□□□□□ -1.39
ABCB1-210ENST00000543898 DMDP11532 3685 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 LMO4P61968 165 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 C6orf226Q5I0X4 101 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 A0A0J9YX75 114 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 IGHV4-61A0A0C4DH41 118 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 MAPK1IP1LQ8NDC0 245 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 MUC4Q99102 2169 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 TRGV2A0A075B6R0 118 aa6.35□□□□□ -1.39
ABCB1-210ENST00000543898 RPL36AP83881 106 aaKnown RBP6.35□□□□□ -1.39
ABCB1-210ENST00000543898 RPL36ALQ969Q0 106 aaKnown RBP6.35□□□□□ -1.39
ABCB1-210ENST00000543898 IGKV3D-7A0A0C4DH55 119 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 TRBV6-5A0A0K0K1A5 114 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 KLLNB2CW77 178 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 DEFB136Q30KP8 78 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 POM121L12Q8N7R1 296 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 VSIG2Q96IQ7 327 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 INAFM2P0DMQ5 153 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 DAD1P61803 113 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 C10orf99Q6UWK7 81 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 LINC00336Q6ZUF6 198 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 PYGO1Q9Y3Y4 419 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 KIF25-AS1Q9Y6Z4 181 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 NXPH4O95158 308 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 IGHG2P01859 326 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 LINC00315P59091 139 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 CFHR3Q02985 330 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 ODF3Q96PU9 254 aa6.34□□□□□ -1.39
ABCB1-210ENST00000543898 ATMQ13315 3056 aa6.34□□□□□ -1.4
ABCB1-210ENST00000543898 FN1P02751 2386 aaKnown RBP6.33□□□□□ -1.4
ABCB1-210ENST00000543898 IGHV4-59P01825 116 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 DAZ2Q13117 558 aaKnown RBP6.33□□□□□ -1.4
ABCB1-210ENST00000543898 DAZ4Q86SG3 579 aaKnown RBP6.33□□□□□ -1.4
ABCB1-210ENST00000543898 TMEM61Q8N0U2 210 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 DAZ3Q9NR90 486 aaKnown RBP6.33□□□□□ -1.4
ABCB1-210ENST00000543898 SPTBN4Q9H254 2564 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 COX7CP15954 63 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 LINC00467Q9BRT7 94 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 LST1O00453 97 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 ACYP1P07311 99 aa6.33□□□□□ -1.4
ABCB1-210ENST00000543898 H3BUA1 57 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 C11orf71Q6IPW1 123 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 Q6Q795 121 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 LINC00526Q96FQ7 95 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 C2orf48Q96LS8 159 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 MSMBP08118 114 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 SBSPONQ8IVN8 264 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 RNF223E7ERA6 249 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 SOCS3O14543 225 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 FBXL19-AS1Q494R0 122 aa6.32□□□□□ -1.4
ABCB1-210ENST00000543898 ZZEF1O43149 2961 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 POLQO75417 2590 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 RBMY1BA6NDE4 496 aaKnown RBP6.31□□□□□ -1.4
ABCB1-210ENST00000543898 RBMY1EA6NEQ0 496 aaKnown RBP6.31□□□□□ -1.4
ABCB1-210ENST00000543898 RBMY1DP0C7P1 496 aaKnown RBP6.31□□□□□ -1.4
ABCB1-210ENST00000543898 RBMY1A1P0DJD3 496 aaKnown RBP6.31□□□□□ -1.4
ABCB1-210ENST00000543898 RBMY1CP0DJD4 496 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 RBMY1FQ15415 496 aaKnown RBP6.31□□□□□ -1.4
ABCB1-210ENST00000543898 PIK3CD-AS1Q5SR53 167 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 LRBAP50851 2863 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 ZNF561-AS1K7EIQ3 104 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 LINC00643Q86TS7 51 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 TMEM86BQ8N661 226 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 LINC00308Q8TCZ7 52 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 PRORYQ9H606 182 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 MUC3AQ02505 3323 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 K7EMT4 169 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 COX7A2LO14548 114 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 DCANP1Q8TF63 244 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 C9orf85Q96MD7 179 aa6.31□□□□□ -1.4
ABCB1-210ENST00000543898 COL27A1Q8IZC6 1860 aaPredicted RBP6.3□□□□□ -1.4
ABCB1-210ENST00000543898 FAM240AA0A1B0GVK7 77 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 A0A1W2PPR1 153 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 INSP01308 110 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 GNLYP22749 145 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 SLURP1P55000 103 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 B4DSR2 109 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
ABCB1-210ENST00000543898 DEFB112Q30KQ8 113 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 SDIM1Q6ZPB5 146 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
ABCB1-210ENST00000543898 TIMM17BO60830 172 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 ATP5G1P05496 136 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
ABCB1-210ENST00000543898 K7EQG2 157 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 DPH3Q96FX2 82 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 C14orf132Q9NPU4 83 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 NAV2Q8IVL1 2488 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 JMJD1CQ15652 2540 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 TRAV13-2A0A0B4J235 113 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 AMELXQ99217 191 aa6.29□□□□□ -1.4
ABCB1-210ENST00000543898 IGHV4-30-2A0A087WSY4 118 aa6.28□□□□□ -1.4
ABCB1-210ENST00000543898 A6NDX4 124 aa6.28□□□□□ -1.4
ABCB1-210ENST00000543898 Q9UF83 564 aa6.28□□□□□ -1.4
ABCB1-210ENST00000543898 PRB1P04280 392 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms