RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 STAB2Q8WWQ8 2551 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 CSMD3Q7Z407 3707 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 LYSTQ99698 3801 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 TRGV2A0A075B6R0 118 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 IGHV1OR15-1A0A075B7D0 117 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 SMIM27A0A1W2PRY6 76 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 PLAC8L1A1L4L8 177 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 F8WDY8 70 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 K7EP34 96 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 TAX1BP3O14907 124 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 ARL14EPLP0DKL9 152 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 GCHFRP30047 84 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 HSD52Q0P140 79 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 IBA57Q5T440 356 aaKnown RBP3.74□□□□□ -1.81
CPSF7-220ENST00000541963 UFSP1Q6NVU6 142 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 GOLT1AQ6ZVE7 132 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 NEGR1Q7Z3B1 354 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 C5orf17Q8NAS9 161 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 MAP1LC3CQ9BXW4 147 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 SPANXCQ9NY87 97 aa3.74□□□□□ -1.81
CPSF7-220ENST00000541963 TRGV1A0A0A0MS02 117 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 TRAV21A0A0B4J279 112 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 A0A1W2PRE2 83 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 GRIFINA4D1Z8 144 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 F8W1H4 67 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 FABP2P12104 132 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 CCL18P55774 89 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 SLAQ13239 276 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 LGALS9BQ3B8N2 356 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 LINC00242Q5T6M2 205 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 LYRM7Q5U5X0 104 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 Q6AWC8 147 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 TMEM136Q6ZRR5 245 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 ERASQ7Z444 233 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 ZFAND2AQ8N6M9 145 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 LINC00612Q8N6U2 182 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 C18orf32Q8TCD1 76 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 TSKUQ8WUA8 353 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 MRAP2Q96G30 205 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 TP53TG3Q9ULZ0 132 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 EPDR1Q9UM22 224 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 V9GYV3 84 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 DNAH1Q9P2D7 4330 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 ALMS1Q8TCU4 4167 aa3.73□□□□□ -1.81
CPSF7-220ENST00000541963 TENM2Q9NT68 2774 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 KRTAP16-1A8MUX0 517 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 H3BNG1 76 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 SPINK4O60575 86 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 LEPROTL1O95214 131 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 TCRAP04437 139 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 COX8AP10176 69 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 SRIP30626 198 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 TDRG1Q3Y452 100 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 MPV17L2Q567V2 206 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 TMEM97Q5BJF2 176 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 AMMECR1LQ6DCA0 310 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 TMEM75Q8N9X5 138 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 Q8TAT8 98 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 C18orf15Q96N68 181 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 MRPL16Q9NX20 251 aaKnown RBP3.72□□□□□ -1.81
CPSF7-220ENST00000541963 PSG8Q9UQ74 426 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 KLF12Q9Y4X4 402 aa3.72□□□□□ -1.81
CPSF7-220ENST00000541963 TRAV26-1A0A087WT03 109 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 SYS1-DBNDD2H3BUS1 97 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 NUPR1O60356 82 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 NTF3P20783 257 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 GNG5P63218 68 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 Q6ZTI0 123 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 LINC00336Q6ZUF6 198 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 PRNTQ86SH4 94 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 C11orf72Q8NBR9 251 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 ATP6V0E2Q8NHE4 81 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 C9orf85Q96MD7 179 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 HIGD1BQ9P298 99 aa3.71□□□□□ -1.82
CPSF7-220ENST00000541963 TRAV8-1A0A0A6YYK1 113 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 TRGV4A0A0C4DH28 118 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 A0A0J9YY99 117 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 A0A1W2PPM0 123 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 FABP5P3A8MUU1 101 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 A8MWL6 223 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 M0R2P5 195 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 PEX7O00628 323 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 GNRH2O43555 120 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 HBBP68871 147 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 TAL2Q16559 108 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 CENPWQ5EE01 88 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 PRR9Q5T870 116 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 LINC01545Q5VT33 79 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 REG3GQ6UW15 175 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 DERL1Q9BUN8 251 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 PRO0255Q9UI72 69 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 HHLA3Q9XRX5 114 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 SPCS1Q9Y6A9 102 aa3.7□□□□□ -1.82
CPSF7-220ENST00000541963 TRBV20OR9-2A0A075B6H5 130 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 IGLV2-18A0A075B6J9 118 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 MUC21A0A0G2JKD1 596 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 MUC21A0A140T8X8 626 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 GGTLC3B5MD39 225 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms