RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 PRM2P04554 102 aa9.39□□□□□ -0.91
SFSWAP-209ENST00000540469 LMO4P61968 165 aa9.39□□□□□ -0.91
SFSWAP-209ENST00000540469 CITED2Q99967 270 aaPredicted RBP9.39□□□□□ -0.91
SFSWAP-209ENST00000540469 Q9HAA7 133 aa9.39□□□□□ -0.91
SFSWAP-209ENST00000540469 USP9XQ93008 2570 aaPredicted RBP9.39□□□□□ -0.91
SFSWAP-209ENST00000540469 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
SFSWAP-209ENST00000540469 Q9UF83 564 aa9.39□□□□□ -0.91
SFSWAP-209ENST00000540469 INAFM2P0DMQ5 153 aa9.39□□□□□ -0.91
SFSWAP-209ENST00000540469 J3KT08 172 aa9.38□□□□□ -0.91
SFSWAP-209ENST00000540469 NDUFA1O15239 70 aa9.38□□□□□ -0.91
SFSWAP-209ENST00000540469 UBE2D4Q9Y2X8 147 aa9.38□□□□□ -0.91
SFSWAP-209ENST00000540469 H3BUA1 57 aa9.38□□□□□ -0.91
SFSWAP-209ENST00000540469 TIMM17BO60830 172 aa9.38□□□□□ -0.91
SFSWAP-209ENST00000540469 IGHG2P01859 326 aa9.38□□□□□ -0.91
SFSWAP-209ENST00000540469 C19orf54Q5BKX5 351 aa9.38□□□□□ -0.91
SFSWAP-209ENST00000540469 TIRAPP58753 221 aa9.38□□□□□ -0.91
SFSWAP-209ENST00000540469 hADV29S1A0JD25 119 aa9.37□□□□□ -0.91
SFSWAP-209ENST00000540469 Q8N2B8 174 aa9.37□□□□□ -0.91
SFSWAP-209ENST00000540469 KIR2DL5BQ8NHK3 375 aa9.37□□□□□ -0.91
SFSWAP-209ENST00000540469 LINC00526Q96FQ7 95 aa9.37□□□□□ -0.91
SFSWAP-209ENST00000540469 HRNRQ86YZ3 2850 aaPredicted RBP9.37□□□□□ -0.91
SFSWAP-209ENST00000540469 IGHV4-38-2P0DP08 117 aa9.36□□□□□ -0.91
SFSWAP-209ENST00000540469 ADORA2A-AS1P86434 159 aa9.36□□□□□ -0.91
SFSWAP-209ENST00000540469 A0A1W2PPR1 153 aa9.36□□□□□ -0.91
SFSWAP-209ENST00000540469 K7EMT4 169 aa9.36□□□□□ -0.91
SFSWAP-209ENST00000540469 COX7CP15954 63 aa9.36□□□□□ -0.91
SFSWAP-209ENST00000540469 SDIM1Q6ZPB5 146 aa9.36□□□□□ -0.91
SFSWAP-209ENST00000540469 IGKV3D-7A0A0C4DH55 119 aa9.35□□□□□ -0.91
SFSWAP-209ENST00000540469 ATP5G1P05496 136 aa9.35□□□□□ -0.91
SFSWAP-209ENST00000540469 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
SFSWAP-209ENST00000540469 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
SFSWAP-209ENST00000540469 PEMTQ9UBM1 199 aa9.35□□□□□ -0.91
SFSWAP-209ENST00000540469 ABCA12Q86UK0 2595 aa9.35□□□□□ -0.91
SFSWAP-209ENST00000540469 FAM104AQ969W3 186 aa9.35□□□□□ -0.91
SFSWAP-209ENST00000540469 ATOX1O00244 68 aa9.34□□□□□ -0.91
SFSWAP-209ENST00000540469 TRACP01848 142 aa9.34□□□□□ -0.91
SFSWAP-209ENST00000540469 CRPP02741 224 aa9.34□□□□□ -0.91
SFSWAP-209ENST00000540469 PIK3CD-AS1Q5SR53 167 aa9.34□□□□□ -0.91
SFSWAP-209ENST00000540469 K7EQG2 157 aa9.34□□□□□ -0.91
SFSWAP-209ENST00000540469 COX6A2Q02221 97 aa9.34□□□□□ -0.91
SFSWAP-209ENST00000540469 DSCR8Q96T75 97 aa9.34□□□□□ -0.91
SFSWAP-209ENST00000540469 CCDC168Q8NDH2 2452 aa9.33□□□□□ -0.92
SFSWAP-209ENST00000540469 A0A1B0GX51 115 aa9.33□□□□□ -0.92
SFSWAP-209ENST00000540469 DEFB131AP59861 70 aa9.33□□□□□ -0.92
SFSWAP-209ENST00000540469 ZNF415Q09FC8 603 aa9.33□□□□□ -0.92
SFSWAP-209ENST00000540469 HRCT1Q6UXD1 115 aa9.33□□□□□ -0.92
SFSWAP-209ENST00000540469 Q6ZSN1 163 aa9.33□□□□□ -0.92
SFSWAP-209ENST00000540469 TOMM7Q9P0U1 55 aa9.33□□□□□ -0.92
SFSWAP-209ENST00000540469 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
SFSWAP-209ENST00000540469 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
SFSWAP-209ENST00000540469 MALP21145 153 aa9.32□□□□□ -0.92
SFSWAP-209ENST00000540469 C10orf99Q6UWK7 81 aa9.32□□□□□ -0.92
SFSWAP-209ENST00000540469 OR13C6PQ8NH95 151 aa9.32□□□□□ -0.92
SFSWAP-209ENST00000540469 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
SFSWAP-209ENST00000540469 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
SFSWAP-209ENST00000540469 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.32□□□□□ -0.92
SFSWAP-209ENST00000540469 C14orf132Q9NPU4 83 aa9.32□□□□□ -0.92
SFSWAP-209ENST00000540469 CXCL5P42830 114 aa9.31□□□□□ -0.92
SFSWAP-209ENST00000540469 FAM218AQ96MZ4 157 aa9.31□□□□□ -0.92
SFSWAP-209ENST00000540469 RBMY1A1P0DJD3 496 aaKnown RBP9.31□□□□□ -0.92
SFSWAP-209ENST00000540469 RBMY1CP0DJD4 496 aa9.31□□□□□ -0.92
SFSWAP-209ENST00000540469 RBMY1FQ15415 496 aaKnown RBP9.31□□□□□ -0.92
SFSWAP-209ENST00000540469 LRRC75A-AS1Q8N1F1 130 aa9.31□□□□□ -0.92
SFSWAP-209ENST00000540469 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
SFSWAP-209ENST00000540469 A6NDX4 124 aa9.3□□□□□ -0.92
SFSWAP-209ENST00000540469 IGLV1-40P01703 118 aa9.3□□□□□ -0.92
SFSWAP-209ENST00000540469 CELSR1Q9NYQ6 3014 aa9.3□□□□□ -0.92
SFSWAP-209ENST00000540469 HIST1H4AP62805 103 aaKnown RBP9.3□□□□□ -0.92
SFSWAP-209ENST00000540469 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
SFSWAP-209ENST00000540469 HIST2H2BCQ6DN03 193 aa9.29□□□□□ -0.92
SFSWAP-209ENST00000540469 HIST2H2BDQ6DRA6 164 aa9.29□□□□□ -0.92
SFSWAP-209ENST00000540469 USP9YO00507 2555 aaPredicted RBP9.29□□□□□ -0.92
SFSWAP-209ENST00000540469 UCNP55089 124 aa9.29□□□□□ -0.92
SFSWAP-209ENST00000540469 TRAV13-2A0A0B4J235 113 aa9.28□□□□□ -0.92
SFSWAP-209ENST00000540469 CSMD2Q7Z408 3487 aa9.28□□□□□ -0.92
SFSWAP-209ENST00000540469 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
SFSWAP-209ENST00000540469 LINC00158P58513 81 aa9.28□□□□□ -0.92
SFSWAP-209ENST00000540469 A0A087WVE0 104 aa9.28□□□□□ -0.92
SFSWAP-209ENST00000540469 TRAV25A0A0B4J276 109 aa9.28□□□□□ -0.92
SFSWAP-209ENST00000540469 IGHV4-61A0A0C4DH41 118 aa9.28□□□□□ -0.92
SFSWAP-209ENST00000540469 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
SFSWAP-209ENST00000540469 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.92
SFSWAP-209ENST00000540469 PIMREGQ9BSJ6 248 aa9.27□□□□□ -0.92
SFSWAP-209ENST00000540469 ABCA2Q9BZC7 2435 aa9.27□□□□□ -0.93
SFSWAP-209ENST00000540469 RPL18AQ02543 176 aaKnown RBP9.27□□□□□ -0.93
SFSWAP-209ENST00000540469 F5H768 121 aa9.27□□□□□ -0.93
SFSWAP-209ENST00000540469 UBE2L6O14933 153 aa9.27□□□□□ -0.93
SFSWAP-209ENST00000540469 SND1-IT1Q9HBX3 110 aa9.27□□□□□ -0.93
SFSWAP-209ENST00000540469 ZFHX3Q15911 3703 aa9.27□□□□□ -0.93
SFSWAP-209ENST00000540469 GNLYP22749 145 aa9.26□□□□□ -0.93
SFSWAP-209ENST00000540469 CFHR3Q02985 330 aa9.26□□□□□ -0.93
SFSWAP-209ENST00000540469 FAM222AQ5U5X8 452 aa9.26□□□□□ -0.93
SFSWAP-209ENST00000540469 HELZ2Q9BYK8 2649 aaKnown RBP9.26□□□□□ -0.93
SFSWAP-209ENST00000540469 KHDC1LQ5JSQ8 128 aa9.26□□□□□ -0.93
SFSWAP-209ENST00000540469 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
SFSWAP-209ENST00000540469 TLN2Q9Y4G6 2542 aa9.26□□□□□ -0.93
SFSWAP-209ENST00000540469 CRYGAP11844 174 aa9.26□□□□□ -0.93
SFSWAP-209ENST00000540469 HECTD1Q9ULT8 2610 aa9.25□□□□□ -0.93
SFSWAP-209ENST00000540469 TRGV1A0A0A0MS02 117 aa9.25□□□□□ -0.93
SFSWAP-209ENST00000540469 WNK1Q9H4A3 2382 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms