RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 M0QXV9 152 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 ERCC8Q13216 396 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 NRACQ8N912 160 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 TMEM141Q96I45 108 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 SMIM2Q9BVW6 85 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 AGPAT4-IT1Q9H0P7 198 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 SPANXB1Q9NS25 103 aaPredicted RBP4.23□□□□□ -1.73
CPSF7-219ENST00000539952 MRPL35Q9NZE8 188 aaKnown RBP4.23□□□□□ -1.73
CPSF7-219ENST00000539952 TP73-AS1Q9UF72 201 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 CELA1Q9UNI1 258 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 PKHD1P08F94 4074 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 TRBV7-3A0A075B6L6 115 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 IGKV2D-26A0A0A0MRZ7 120 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 IGKV3D-20A0A0C4DH25 116 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 K7EQG2 157 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 INAFM2P0DMQ5 153 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 FXYD7P58549 80 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 SUMO2P61956 95 aaKnown RBP4.22□□□□□ -1.73
CPSF7-219ENST00000539952 SRSF9Q13242 221 aaKnown RBP eCLIP4.22□□□□□ -1.73
CPSF7-219ENST00000539952 C6orf223Q8N319 242 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 C15orf53Q8NAA6 179 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 NEXN-AS1Q8NBZ9 246 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 OR10J6PQ8NGY7 276 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 MSRB1Q9NZV6 116 aa4.22□□□□□ -1.73
CPSF7-219ENST00000539952 DMBT1Q9UGM3 2413 aaPredicted RBP4.21□□□□□ -1.74
CPSF7-219ENST00000539952 NBDYA0A0U1RRE5 68 aa4.21□□□□□ -1.74
CPSF7-219ENST00000539952 APOMO95445 188 aa4.21□□□□□ -1.74
CPSF7-219ENST00000539952 S100A4P26447 101 aaKnown RBP4.21□□□□□ -1.74
CPSF7-219ENST00000539952 ASIPP42127 132 aa4.21□□□□□ -1.74
CPSF7-219ENST00000539952 FOXI1Q12951 378 aa4.21□□□□□ -1.74
CPSF7-219ENST00000539952 SPANXDQ9BXN6 97 aa4.21□□□□□ -1.74
CPSF7-219ENST00000539952 MRPL16Q9NX20 251 aaKnown RBP4.21□□□□□ -1.74
CPSF7-219ENST00000539952 HSPG2P98160 4391 aa4.21□□□□□ -1.74
CPSF7-219ENST00000539952 PKD1P98161 4303 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 KNCNA6PVL3 124 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 VCYO14598 125 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 UBE2D1P51668 147 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 CKS1BP61024 79 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 WFDC2Q14508 124 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 ETDBQ3ZM63 59 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 C2orf66Q6UXQ4 117 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 SCGB1D4Q6XE38 83 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 Q8TAT8 98 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 DCANP1Q8TF63 244 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 GLMPQ8WWB7 406 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 PPDPFLQ8WWR9 84 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 TIMM17AQ99595 171 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 NAA38Q9BRA0 125 aaKnown RBP4.2□□□□□ -1.74
CPSF7-219ENST00000539952 XCL2Q9UBD3 114 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 PHLDA3Q9Y5J5 127 aa4.2□□□□□ -1.74
CPSF7-219ENST00000539952 IGHV3-66A0A0C4DH42 116 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 C11orf86A6NJI1 115 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 ZNF815PA8K554 130 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 A8MWV9 139 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 PRAC2D3DTV9 90 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 H3BMM0 161 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 ZNF688P0C7X2 276 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 ID1P41134 155 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 CRYBA4P53673 196 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 EMP1P54849 157 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 CCL18P55774 89 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 UBE2D3P61077 147 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 SNRPD3P62318 126 aaKnown RBP4.19□□□□□ -1.74
CPSF7-219ENST00000539952 UBE2D2P62837 147 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 SMAGPQ0VAQ4 97 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 PMVKQ15126 192 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 CFAP126Q5VTH2 177 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 KIR2DL4Q99706 377 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 GTSF1LQ9H1H1 148 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 PRO0461Q9UI25 63 aa4.19□□□□□ -1.74
CPSF7-219ENST00000539952 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.18□□□□□ -1.74
CPSF7-219ENST00000539952 TRAV8-2A0A0B4J237 113 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 SCGB1C2P0DMR2 95 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 HTN3P15516 51 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 GATA1P15976 413 aaPredicted RBP4.18□□□□□ -1.74
CPSF7-219ENST00000539952 FAM222AQ5U5X8 452 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 TEN1Q86WV5 123 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 SLC25A29Q8N8R3 303 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 ZNRF2Q8NHG8 242 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 BAALCQ8WXS3 180 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 RASL10AQ92737 203 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 LINC01600Q96MT4 127 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 PRADC1Q9BSG0 188 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 C11orf21Q9P2W6 132 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
CPSF7-219ENST00000539952 LOC107984156A0A0G2JMH3 177 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 TRBV6-5A0A0K0K1A5 114 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 H3BVH4 76 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 K7ERJ3 54 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 NXPH4O95158 308 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 PSMB2P49721 201 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 POLR2KP53803 58 aaKnown RBP4.17□□□□□ -1.74
CPSF7-219ENST00000539952 DAD1P61803 113 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 RHOHQ15669 191 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 IGFL4Q6B9Z1 124 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 FAM159AQ6UWV7 190 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 SH2D6Q7Z4S9 175 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 ARL17AQ8IVW1 177 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms