RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 C11orf44Q8N8P7 122 aa6.63□□□□□ -1.35
DDB1-211ENST00000538280 TMEM263Q8WUH6 116 aaKnown RBP6.63□□□□□ -1.35
DDB1-211ENST00000538280 XCL2Q9UBD3 114 aa6.63□□□□□ -1.35
DDB1-211ENST00000538280 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
DDB1-211ENST00000538280 TRAV4A0A0B4J268 109 aa6.62□□□□□ -1.35
DDB1-211ENST00000538280 TRBV10-1A0A0K0K1A3 114 aa6.62□□□□□ -1.35
DDB1-211ENST00000538280 SRSF9Q13242 221 aaKnown RBP eCLIP6.62□□□□□ -1.35
DDB1-211ENST00000538280 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
DDB1-211ENST00000538280 PRO0461Q9UI25 63 aa6.62□□□□□ -1.35
DDB1-211ENST00000538280 IGHV1-58A0A0C4DH39 117 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 PLAC8L1A1L4L8 177 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 F8W1H4 67 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 SAP30O75446 220 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 TSPAN13O95857 204 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 UBE2D3P61077 147 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 UBE2D2P62837 147 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 DAZ2Q13117 558 aaKnown RBP6.61□□□□□ -1.35
DDB1-211ENST00000538280 COTL1Q14019 142 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 Q6ZUT4 128 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 NDUFA11Q86Y39 141 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 SBSPONQ8IVN8 264 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 C10orf126Q8N4M7 172 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
DDB1-211ENST00000538280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.6□□□□□ -1.35
DDB1-211ENST00000538280 A0A0J9YXY3 114 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 IGKV2-29A2NJV5 120 aaPredicted RBP6.6□□□□□ -1.35
DDB1-211ENST00000538280 G3V4G9 280 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 K7EQD1 137 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 CIDEAO60543 219 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 CFC1BP0CG36 223 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 CFC1P0CG37 223 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 IGHV3-30-3P0DP02 117 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 TIRAPP58753 221 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 CEMP1Q6PRD7 247 aaPredicted RBP6.6□□□□□ -1.35
DDB1-211ENST00000538280 CSNK1G2-AS1Q8NCQ2 148 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 LITAFQ99732 161 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 OVOL2Q9BRP0 275 aa6.6□□□□□ -1.35
DDB1-211ENST00000538280 CSDC2Q9Y534 153 aaKnown RBP6.6□□□□□ -1.35
DDB1-211ENST00000538280 TRGV1A0A0A0MS02 117 aa6.59□□□□□ -1.35
DDB1-211ENST00000538280 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
DDB1-211ENST00000538280 Q6ZTI0 123 aa6.59□□□□□ -1.35
DDB1-211ENST00000538280 C16orf74Q96GX8 76 aa6.59□□□□□ -1.35
DDB1-211ENST00000538280 VSIG2Q96IQ7 327 aa6.59□□□□□ -1.35
DDB1-211ENST00000538280 SPANXDQ9BXN6 97 aa6.59□□□□□ -1.35
DDB1-211ENST00000538280 SPANXCQ9NY87 97 aa6.59□□□□□ -1.35
DDB1-211ENST00000538280 NBEAL2Q6ZNJ1 2754 aa6.58□□□□□ -1.36
DDB1-211ENST00000538280 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
DDB1-211ENST00000538280 IGHV3-38A0A0C4DH36 116 aa6.58□□□□□ -1.36
DDB1-211ENST00000538280 TMEM238C9JI98 176 aa6.58□□□□□ -1.36
DDB1-211ENST00000538280 RPL36AP83881 106 aaKnown RBP6.58□□□□□ -1.36
DDB1-211ENST00000538280 RNF151Q2KHN1 245 aa6.58□□□□□ -1.36
DDB1-211ENST00000538280 NTM-AS1Q6ZSK4 140 aa6.58□□□□□ -1.36
DDB1-211ENST00000538280 DAZ4Q86SG3 579 aaKnown RBP6.58□□□□□ -1.36
DDB1-211ENST00000538280 RPL36ALQ969Q0 106 aaKnown RBP6.58□□□□□ -1.36
DDB1-211ENST00000538280 CITED1Q99966 193 aa6.58□□□□□ -1.36
DDB1-211ENST00000538280 C1QTNF4Q9BXJ3 329 aa6.58□□□□□ -1.36
DDB1-211ENST00000538280 DAZ3Q9NR90 486 aaKnown RBP6.58□□□□□ -1.36
DDB1-211ENST00000538280 IGHV3-64A0A075B6Q5 118 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 IGHV3OR16-12A0A075B7B8 117 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 TRAV8-3A0A0A6YYJ7 113 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 H3BMG7 143 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 TIMM17BO60830 172 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 APOMO95445 188 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 PRB2P02812 416 aaPredicted RBP6.57□□□□□ -1.36
DDB1-211ENST00000538280 RNASE13Q5GAN3 156 aaKnown RBP6.57□□□□□ -1.36
DDB1-211ENST00000538280 LYRM7Q5U5X0 104 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 ZFAND6Q6FIF0 208 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 WFDC10AQ9H1F0 79 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 GTSF1LQ9H1H1 148 aa6.57□□□□□ -1.36
DDB1-211ENST00000538280 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
DDB1-211ENST00000538280 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 TEX48A0A1B0GUV7 120 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 A4D1N5 150 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 LINC00694P0DN24 101 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
DDB1-211ENST00000538280 WFDC2Q14508 124 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 LINC00482Q8N8I6 264 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 RNF183Q96D59 192 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 PRO1854Q9UHT4 67 aa6.56□□□□□ -1.36
DDB1-211ENST00000538280 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 TRBV6-4A0A1B0GX49 114 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 NDUFA1O15239 70 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 IGHV3-33P01772 117 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 HERVK_113P63121 156 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 SMAGPQ0VAQ4 97 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 LINC00612Q8N6U2 182 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 ATP6V0E2Q8NHE4 81 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 VPS25Q9BRG1 176 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 NOP10Q9NPE3 64 aaKnown RBP6.55□□□□□ -1.36
DDB1-211ENST00000538280 NDUFA12Q9UI09 145 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 RYR2Q92736 4967 aa6.55□□□□□ -1.36
DDB1-211ENST00000538280 TRBV20-1A0A075B6N2 111 aa6.54□□□□□ -1.36
DDB1-211ENST00000538280 GAGE12JA6NER3 117 aa6.54□□□□□ -1.36
DDB1-211ENST00000538280 H7C423 109 aa6.54□□□□□ -1.36
DDB1-211ENST00000538280 SPINK8P0C7L1 97 aa6.54□□□□□ -1.36
DDB1-211ENST00000538280 RPL35AP18077 110 aaKnown RBP6.54□□□□□ -1.36
DDB1-211ENST00000538280 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
DDB1-211ENST00000538280 GAGE4Q13068 117 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms