RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-222ENST00000534375 GOLGA3Q08378 1498 aa1.17□□□□□ -2.22
PICALM-222ENST00000534375 ANKRD17O75179 2603 aaKnown RBP1.17□□□□□ -2.22
PICALM-222ENST00000534375 C2CD3Q4AC94 2353 aa1.16□□□□□ -2.22
PICALM-222ENST00000534375 HMGXB3Q12766 1538 aa1.16□□□□□ -2.22
PICALM-222ENST00000534375 GVQW2A0A096LPI5 108 aaPredicted RBP1.16□□□□□ -2.22
PICALM-222ENST00000534375 ACYP2P14621 99 aa1.16□□□□□ -2.22
PICALM-222ENST00000534375 RANBP2P49792 3224 aaKnown RBP1.16□□□□□ -2.22
PICALM-222ENST00000534375 FAM208BQ5VWN6 2430 aa1.15□□□□□ -2.23
PICALM-222ENST00000534375 TRAV1-2A0A0B4J238 106 aa1.15□□□□□ -2.23
PICALM-222ENST00000534375 DYNLRB1Q9NP97 96 aa1.15□□□□□ -2.23
PICALM-222ENST00000534375 GCN1Q92616 2671 aaKnown RBP1.15□□□□□ -2.23
PICALM-222ENST00000534375 MUC3AQ02505 3323 aa1.15□□□□□ -2.23
PICALM-222ENST00000534375 SPG11Q96JI7 2443 aa1.15□□□□□ -2.23
PICALM-222ENST00000534375 ZNF609O15014 1411 aa1.15□□□□□ -2.23
PICALM-222ENST00000534375 DNAH12Q6ZR08 3092 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 COL4A6Q14031 1691 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 ARHGEF5Q12774 1597 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 MKI67P46013 3256 aaKnown RBP1.14□□□□□ -2.23
PICALM-222ENST00000534375 ASXL3Q9C0F0 2248 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 TRAV22A0A0B4J277 110 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 C10orf142B7Z368 130 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 CHKB-CPT1BH3BT56 60 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 M0R135 149 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 HMGN4O00479 90 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 GNGT2O14610 69 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 Q0VG73 95 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 COL5A1-AS1Q5SY13 56 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 VMO1Q7Z5L0 202 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 SCP2D1Q9UJQ7 156 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 SPTBN4Q9H254 2564 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 WDFY4Q6ZS81 3184 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 KALRNO60229 2985 aa1.14□□□□□ -2.23
PICALM-222ENST00000534375 CACNA1CQ13936 2221 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 KDM5AP29375 1690 aaKnown RBP1.13□□□□□ -2.23
PICALM-222ENST00000534375 IQSEC2Q5JU85 1478 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 BTAF1O14981 1849 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 ZNF137PP52743 207 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 BAGE3Q86Y29 109 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 FAM167A-AS1Q96KT0 104 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 BPESC1Q9GZL8 116 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 CDC42SE2Q9NRR3 84 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 R4GMQ9 66 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 TOP2BQ02880 1626 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 NHSL1Q5SYE7 1610 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 TTC28Q96AY4 2481 aa1.13□□□□□ -2.23
PICALM-222ENST00000534375 SHANK2Q9UPX8 1470 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 NESP48681 1621 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 A0A0D9SG42 100 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 NAP1L6A6NFF2 107 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 UBE2D3P61077 147 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 UBE2D2P62837 147 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 C6orf52Q5T4I8 152 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 SFTA2Q6UW10 78 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 DPY30Q9C005 99 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 MANBALQ9NQG1 85 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 CRCT1Q9UGL9 99 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 V9GYH0 126 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 MYOM1P52179 1685 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 SPTAN1Q13813 2472 aaKnown RBP1.12□□□□□ -2.23
PICALM-222ENST00000534375 CCDC168Q8NDH2 2452 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 PLXNB2O15031 1838 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 LRRK2Q5S007 2527 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 TEX14Q8IWB6 1497 aa1.12□□□□□ -2.23
PICALM-222ENST00000534375 MAP1BP46821 2468 aaKnown RBP1.11□□□□□ -2.23
PICALM-222ENST00000534375 CENPFP49454 3210 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 IGLC7A0M8Q6 106 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 TMEM14DPA8MWL7 114 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 F2Z2F3 143 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 G3V318 75 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 UBA52P62987 128 aaKnown RBP1.11□□□□□ -2.23
PICALM-222ENST00000534375 SEC11AP67812 179 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 SPINK9Q5DT21 86 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 Q6ZRX8 168 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 SMIM11BQ8TCY0 68 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 AMELXQ99217 191 aa1.11□□□□□ -2.23
PICALM-222ENST00000534375 ANKHD1Q8IWZ3 2542 aaKnown RBP1.11□□□□□ -2.23
PICALM-222ENST00000534375 NOTCH1P46531 2555 aa1.1□□□□□ -2.23
PICALM-222ENST00000534375 CEP290O15078 2479 aa1.1□□□□□ -2.23
PICALM-222ENST00000534375 CRYM-AS1A6NIL9 109 aa1.1□□□□□ -2.23
PICALM-222ENST00000534375 KRTAP4-1Q9BYQ7 146 aa1.1□□□□□ -2.23
PICALM-222ENST00000534375 CFAP54Q96N23 3096 aa1.1□□□□□ -2.23
PICALM-222ENST00000534375 SPEGQ15772 3267 aa1.1□□□□□ -2.23
PICALM-222ENST00000534375 CELSR3Q9NYQ7 3312 aa1.1□□□□□ -2.23
PICALM-222ENST00000534375 KIF21AQ7Z4S6 1674 aa1.1□□□□□ -2.23
PICALM-222ENST00000534375 ANKRD36BQ8N2N9 1353 aa1.09□□□□□ -2.23
PICALM-222ENST00000534375 LAMC3Q9Y6N6 1575 aa1.09□□□□□ -2.23
PICALM-222ENST00000534375 FBN3Q75N90 2809 aa1.09□□□□□ -2.23
PICALM-222ENST00000534375 F8VRH5 84 aa1.09□□□□□ -2.23
PICALM-222ENST00000534375 MED14O60244 1454 aa1.09□□□□□ -2.24
PICALM-222ENST00000534375 C5orf42Q9H799 3197 aa1.09□□□□□ -2.24
PICALM-222ENST00000534375 ATRQ13535 2644 aa1.09□□□□□ -2.24
PICALM-222ENST00000534375 BRCA2P51587 3418 aa1.09□□□□□ -2.24
PICALM-222ENST00000534375 CDK13Q14004 1512 aaKnown RBP1.09□□□□□ -2.24
PICALM-222ENST00000534375 STAB1Q9NY15 2570 aa1.08□□□□□ -2.24
PICALM-222ENST00000534375 BPTFQ12830 3046 aa1.08□□□□□ -2.24
PICALM-222ENST00000534375 SBF2Q86WG5 1849 aa1.08□□□□□ -2.24
PICALM-222ENST00000534375 SPTBN5Q9NRC6 3674 aaKnown RBP1.08□□□□□ -2.24
PICALM-222ENST00000534375 SCN7AQ01118 1682 aa1.08□□□□□ -2.24
PICALM-222ENST00000534375 CTXND1A0A1B0GTU2 59 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms