RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 TEN1Q86WV5 123 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 SBSPONQ8IVN8 264 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 ARL17AQ8IVW1 177 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 Q8N2B8 174 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 Q8NBF4 154 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 LINC01600Q96MT4 127 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 LITAFQ99732 161 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 CHCHD5Q9BSY4 110 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 PPDPFQ9H3Y8 114 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 ERG28Q9UKR5 140 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 MUC4Q99102 2169 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 MYO9AB2RTY4 2548 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 USP9YO00507 2555 aaPredicted RBP3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 IGLV4-3A0A075B6K6 122 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 TINCRA0A1B0GVN0 87 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 INSP01308 110 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 SCGB1C2P0DMR2 95 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 CD28P10747 220 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 ZNF22P17026 224 aaPredicted RBP3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 PSMB2P49721 201 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 SEC61GP60059 68 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 CIRBPQ14011 172 aaKnown RBP3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 ATXN8Q156A1 80 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 DEFB112Q30KQ8 113 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 ETDBQ3ZM63 59 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 AMTNQ6UX39 209 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 Q6ZQT7 251 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 C18orf65Q6ZTR6 163 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 NOTCH2NLQ7Z3S9 236 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 C4orf3Q8WVX3 66 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 AMELXQ99217 191 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 SPANXCQ9NY87 97 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 DCHS2Q6V1P9 2916 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 USP9XQ93008 2570 aaPredicted RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 ANKRD17O75179 2603 aaKnown RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 IGHV1-58A0A0C4DH39 117 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 TRBV10-1A0A0K0K1A3 114 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 IGHV3-53P01767 116 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 CFC1BP0CG36 223 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 CFC1P0CG37 223 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 AZU1P20160 251 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 RPL13AP40429 203 aaKnown RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 SYNJ2BPP57105 145 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 KRTAP10-9P60411 292 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 RPL39P62891 51 aaKnown RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 SPINK13Q1W4C9 94 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 ZNRF2Q8NHG8 242 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 DYNLRB2Q8TF09 96 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 JPT2Q9H910 190 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 ZNF702PQ9H963 129 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 TSSC4Q9Y5U2 329 aaPredicted RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 ITPR1Q14643 2758 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 SPENQ96T58 3664 aaKnown RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 LRRK2Q5S007 2527 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 A0A096LNT2 108 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 H3BMM0 161 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 H3BT86 120 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 IGHV3-33P01772 117 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 IGHV3-30-3P0DP02 117 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 DEFB1P60022 68 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 HERVK_113P63121 156 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 MRPL23Q16540 153 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 MIAQ16674 131 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 LINC00242Q5T6M2 205 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 SH2D6Q7Z4S9 175 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 LINC01561Q8N1V8 128 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 KLHL30-AS1Q8NEE0 82 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 TMEM263Q8WUH6 116 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 VSIG2Q96IQ7 327 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 GTSF1LQ9H1H1 148 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 GEMIN7Q9H840 131 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 NDUFA12Q9UI09 145 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 CSDC2Q9Y534 153 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 PRRC2AP48634 2157 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 NAV2Q8IVL1 2488 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 DOPEY2Q9Y3R5 2298 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 CFAP46Q8IYW2 2715 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 BSNQ9UPA5 3926 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 FLNCQ14315 2725 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 TRAV12-2A0A075B6T6 113 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 RPL37AP8A6NKH3 93 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 H7C423 109 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 NDUFA1O15239 70 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 RS1O15537 224 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 SLC25A20O43772 301 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 TCL1BO95988 128 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 IGKV3-20P01619 116 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 TSPEAR-AS2P59090 65 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 DEFB131AP59861 70 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 DAZ2Q13117 558 aaKnown RBP3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 Q1RN00 199 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 ZFAND6Q6FIF0 208 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 SFTA2Q6UW10 78 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 FAM19A3Q7Z5A8 133 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms