RNA–Protein interactions for RNA: ENST00000527224.1

PACS1-205, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 3,024 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-205ENST00000527224 KNCNA6PVL3 124 aa13.52□□□□□ -0.24
PACS1-205ENST00000527224 Q6JHZ5 121 aa13.52□□□□□ -0.24
PACS1-205ENST00000527224 A0A0U1RQV1 116 aa13.52□□□□□ -0.25
PACS1-205ENST00000527224 ODF3BA8MYP8 253 aa13.52□□□□□ -0.25
PACS1-205ENST00000527224 RPL28P46779 137 aaKnown RBP13.52□□□□□ -0.25
PACS1-205ENST00000527224 COL12A1Q99715 3063 aa13.51□□□□□ -0.25
PACS1-205ENST00000527224 K7ENP7 123 aa13.51□□□□□ -0.25
PACS1-205ENST00000527224 IGHV3-16A0A0C4DH30 117 aa13.5□□□□□ -0.25
PACS1-205ENST00000527224 COX6A2Q02221 97 aa13.5□□□□□ -0.25
PACS1-205ENST00000527224 NDUFA1O15239 70 aa13.5□□□□□ -0.25
PACS1-205ENST00000527224 SLPIP03973 132 aa13.5□□□□□ -0.25
PACS1-205ENST00000527224 FAM222AQ5U5X8 452 aa13.5□□□□□ -0.25
PACS1-205ENST00000527224 FAM236DA0A1B0GTK5 79 aa13.49□□□□□ -0.25
PACS1-205ENST00000527224 KLLNB2CW77 178 aa13.49□□□□□ -0.25
PACS1-205ENST00000527224 FAM236CP0DP71 79 aa13.49□□□□□ -0.25
PACS1-205ENST00000527224 UBE2D4Q9Y2X8 147 aa13.49□□□□□ -0.25
PACS1-205ENST00000527224 FAM19A1Q7Z5A9 133 aa13.49□□□□□ -0.25
PACS1-205ENST00000527224 C2CD3Q4AC94 2353 aa13.49□□□□□ -0.25
PACS1-205ENST00000527224 APRG1Q8IVJ8 170 aa13.48□□□□□ -0.25
PACS1-205ENST00000527224 TIMM17BO60830 172 aa13.48□□□□□ -0.25
PACS1-205ENST00000527224 PRM2P04554 102 aa13.48□□□□□ -0.25
PACS1-205ENST00000527224 TLN1Q9Y490 2541 aaKnown RBP13.47□□□□□ -0.25
PACS1-205ENST00000527224 MINOS1Q5TGZ0 78 aa13.47□□□□□ -0.25
PACS1-205ENST00000527224 CREBBPQ92793 2442 aa13.47□□□□□ -0.25
PACS1-205ENST00000527224 LINC00467Q9BRT7 94 aa13.47□□□□□ -0.25
PACS1-205ENST00000527224 C9orf85Q96MD7 179 aa13.46□□□□□ -0.25
PACS1-205ENST00000527224 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.26
PACS1-205ENST00000527224 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.26
PACS1-205ENST00000527224 AVPP01185 164 aa13.46□□□□□ -0.26
PACS1-205ENST00000527224 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.26
PACS1-205ENST00000527224 RBMY1A1P0DJD3 496 aaKnown RBP13.46□□□□□ -0.26
PACS1-205ENST00000527224 RBMY1CP0DJD4 496 aa13.46□□□□□ -0.26
PACS1-205ENST00000527224 RBMY1FQ15415 496 aaKnown RBP13.46□□□□□ -0.26
PACS1-205ENST00000527224 SPINK13Q1W4C9 94 aa13.45□□□□□ -0.26
PACS1-205ENST00000527224 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.45□□□□□ -0.26
PACS1-205ENST00000527224 SPTAN1Q13813 2472 aaKnown RBP13.45□□□□□ -0.26
PACS1-205ENST00000527224 RHPN1-AS1Q9BWJ2 59 aa13.45□□□□□ -0.26
PACS1-205ENST00000527224 ANKHD1Q8IWZ3 2542 aaKnown RBP13.44□□□□□ -0.26
PACS1-205ENST00000527224 F8WDY8 70 aa13.44□□□□□ -0.26
PACS1-205ENST00000527224 HIST2H2BCQ6DN03 193 aa13.44□□□□□ -0.26
PACS1-205ENST00000527224 HIST2H2BDQ6DRA6 164 aa13.44□□□□□ -0.26
PACS1-205ENST00000527224 ENHOQ6UWT2 76 aa13.44□□□□□ -0.26
PACS1-205ENST00000527224 TMEM86BQ8N661 226 aa13.44□□□□□ -0.26
PACS1-205ENST00000527224 XCL1P47992 114 aa13.43□□□□□ -0.26
PACS1-205ENST00000527224 XCL2Q9UBD3 114 aa13.43□□□□□ -0.26
PACS1-205ENST00000527224 BSNQ9UPA5 3926 aa13.43□□□□□ -0.26
PACS1-205ENST00000527224 LECT2O14960 151 aa13.42□□□□□ -0.26
PACS1-205ENST00000527224 CHCHD7Q9BUK0 85 aa13.42□□□□□ -0.26
PACS1-205ENST00000527224 LINC00337Q8N6G1 96 aa13.42□□□□□ -0.26
PACS1-205ENST00000527224 NDUFC2O95298 119 aa13.42□□□□□ -0.26
PACS1-205ENST00000527224 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.41□□□□□ -0.26
PACS1-205ENST00000527224 BRK1Q8WUW1 75 aa13.41□□□□□ -0.26
PACS1-205ENST00000527224 SNURFQ9Y675 71 aa13.41□□□□□ -0.26
PACS1-205ENST00000527224 LINC00474Q9P2X8 69 aa13.41□□□□□ -0.26
PACS1-205ENST00000527224 Q6ZSN1 163 aa13.4□□□□□ -0.26
PACS1-205ENST00000527224 CRPP02741 224 aa13.4□□□□□ -0.26
PACS1-205ENST00000527224 IGF2RP11717 2491 aa13.4□□□□□ -0.26
PACS1-205ENST00000527224 ZNF415Q09FC8 603 aa13.4□□□□□ -0.26
PACS1-205ENST00000527224 DGAT2L7PQ6IED9 249 aa13.4□□□□□ -0.26
PACS1-205ENST00000527224 FP248Q71RG6 208 aaPredicted RBP13.4□□□□□ -0.26
PACS1-205ENST00000527224 ATRXP46100 2492 aa13.39□□□□□ -0.27
PACS1-205ENST00000527224 IGFL3Q6UXB1 125 aa13.39□□□□□ -0.27
PACS1-205ENST00000527224 LINC01560Q8TB33 94 aa13.39□□□□□ -0.27
PACS1-205ENST00000527224 SMIM11BQ8TCY0 68 aa13.39□□□□□ -0.27
PACS1-205ENST00000527224 CSMD2Q7Z408 3487 aa13.38□□□□□ -0.27
PACS1-205ENST00000527224 IGHV1OR15-1A0A075B7D0 117 aa13.38□□□□□ -0.27
PACS1-205ENST00000527224 SEC61GP60059 68 aa13.38□□□□□ -0.27
PACS1-205ENST00000527224 MIR7-3HGQ8N6C7 128 aa13.37□□□□□ -0.27
PACS1-205ENST00000527224 H7BZZ5 65 aa13.37□□□□□ -0.27
PACS1-205ENST00000527224 ZFP36P26651 326 aaKnown RBP13.37□□□□□ -0.27
PACS1-205ENST00000527224 C16orf95Q9H693 158 aa13.37□□□□□ -0.27
PACS1-205ENST00000527224 SERP1Q9Y6X1 66 aa13.37□□□□□ -0.27
PACS1-205ENST00000527224 LYPD5Q6UWN5 251 aa13.36□□□□□ -0.27
PACS1-205ENST00000527224 IGHV3OR16-12A0A075B7B8 117 aa13.36□□□□□ -0.27
PACS1-205ENST00000527224 LINC00242Q5T6M2 205 aa13.35□□□□□ -0.27
PACS1-205ENST00000527224 IGKV2-28A0A075B6P5 120 aa13.35□□□□□ -0.27
PACS1-205ENST00000527224 SMIM1B2RUZ4 78 aa13.35□□□□□ -0.27
PACS1-205ENST00000527224 IGKV2D-28P01615 120 aa13.35□□□□□ -0.27
PACS1-205ENST00000527224 SAA4P35542 130 aa13.35□□□□□ -0.27
PACS1-205ENST00000527224 MAP1AP78559 2803 aaPredicted RBP13.35□□□□□ -0.27
PACS1-205ENST00000527224 NDUFA4O00483 81 aa13.34□□□□□ -0.27
PACS1-205ENST00000527224 RPL36AP83881 106 aaKnown RBP13.34□□□□□ -0.27
PACS1-205ENST00000527224 CDSNQ15517 529 aa13.34□□□□□ -0.27
PACS1-205ENST00000527224 RPL36ALQ969Q0 106 aaKnown RBP13.34□□□□□ -0.27
PACS1-205ENST00000527224 RMI2Q96E14 147 aa13.34□□□□□ -0.27
PACS1-205ENST00000527224 HRNRQ86YZ3 2850 aaPredicted RBP13.33□□□□□ -0.28
PACS1-205ENST00000527224 NDUFC2-KCTD14E9PQ53 114 aa13.33□□□□□ -0.28
PACS1-205ENST00000527224 RNASE1P07998 156 aaKnown RBP13.33□□□□□ -0.28
PACS1-205ENST00000527224 SND1-IT1Q9HBX3 110 aa13.33□□□□□ -0.28
PACS1-205ENST00000527224 IGLV5-39A0A0G2JS06 123 aa13.32□□□□□ -0.28
PACS1-205ENST00000527224 NOTCH3Q9UM47 2321 aa13.32□□□□□ -0.28
PACS1-205ENST00000527224 TRAV13-2A0A0B4J235 113 aa13.31□□□□□ -0.28
PACS1-205ENST00000527224 V9GYY9 64 aa13.31□□□□□ -0.28
PACS1-205ENST00000527224 SS18Q15532 418 aa13.3□□□□□ -0.28
PACS1-205ENST00000527224 C5orf56Q8N8D9 126 aa13.3□□□□□ -0.28
PACS1-205ENST00000527224 COPS9Q8WXC6 57 aa13.3□□□□□ -0.28
PACS1-205ENST00000527224 OBSCN-AS1Q96MR7 158 aa13.3□□□□□ -0.28
PACS1-205ENST00000527224 TOMM7Q9P0U1 55 aa13.3□□□□□ -0.28
PACS1-205ENST00000527224 MINOS1-NBL1R4GNA1 71 aa13.3□□□□□ -0.28
PACS1-205ENST00000527224 SPTBN4Q9H254 2564 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms