RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 CPAMD8Q8IZJ3 1885 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 GDF5OSQ5U4N7 250 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 CLEC2BQ92478 149 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 SERP1Q9Y6X1 66 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 U3KQK5 164 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 SPAG11BQ08648 103 aa12.65□□□□□ -0.38
BEST1-203ENST00000524877 IGLV1-51P01701 117 aa12.65□□□□□ -0.38
BEST1-203ENST00000524877 UBE2AP49459 152 aa12.64□□□□□ -0.39
BEST1-203ENST00000524877 FRMD6-AS1P0C7T7 363 aa12.64□□□□□ -0.39
BEST1-203ENST00000524877 MRPS36P82909 103 aaKnown RBP12.64□□□□□ -0.39
BEST1-203ENST00000524877 A6NED7 52 aa12.63□□□□□ -0.39
BEST1-203ENST00000524877 H7C423 109 aa12.62□□□□□ -0.39
BEST1-203ENST00000524877 ATP5EP2Q5VTU8 51 aa12.62□□□□□ -0.39
BEST1-203ENST00000524877 NHLRC4P0CG21 123 aaPredicted RBP12.62□□□□□ -0.39
BEST1-203ENST00000524877 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
BEST1-203ENST00000524877 BRI3O95415 125 aa12.62□□□□□ -0.39
BEST1-203ENST00000524877 NANOS2P60321 138 aaKnown RBP12.62□□□□□ -0.39
BEST1-203ENST00000524877 REG3AQ06141 175 aa12.62□□□□□ -0.39
BEST1-203ENST00000524877 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
BEST1-203ENST00000524877 NREPQ16612 68 aa12.61□□□□□ -0.39
BEST1-203ENST00000524877 DOPEY2Q9Y3R5 2298 aa12.61□□□□□ -0.39
BEST1-203ENST00000524877 KPRPQ5T749 579 aaPredicted RBP12.61□□□□□ -0.39
BEST1-203ENST00000524877 PLCE1Q9P212 2302 aa12.6□□□□□ -0.39
BEST1-203ENST00000524877 CFAP126Q5VTH2 177 aa12.6□□□□□ -0.39
BEST1-203ENST00000524877 IGLV2-18A0A075B6J9 118 aa12.6□□□□□ -0.39
BEST1-203ENST00000524877 M0R2N4 97 aa12.6□□□□□ -0.39
BEST1-203ENST00000524877 LINC00269Q8N2A0 174 aa12.6□□□□□ -0.39
BEST1-203ENST00000524877 C19orf71A6NCJ1 209 aa12.6□□□□□ -0.39
BEST1-203ENST00000524877 NAV2Q8IVL1 2488 aa12.59□□□□□ -0.39
BEST1-203ENST00000524877 LINC00526Q96FQ7 95 aa12.59□□□□□ -0.39
BEST1-203ENST00000524877 H3BQ85 93 aa12.59□□□□□ -0.39
BEST1-203ENST00000524877 PROK1P58294 105 aa12.59□□□□□ -0.39
BEST1-203ENST00000524877 DCANP1Q8TF63 244 aa12.59□□□□□ -0.39
BEST1-203ENST00000524877 TOMM6Q96B49 74 aa12.59□□□□□ -0.39
BEST1-203ENST00000524877 PLA2G2EQ9NZK7 142 aa12.58□□□□□ -0.4
BEST1-203ENST00000524877 SPG11Q96JI7 2443 aa12.58□□□□□ -0.4
BEST1-203ENST00000524877 NDUFS5O43920 106 aa12.58□□□□□ -0.4
BEST1-203ENST00000524877 LOC107984640A0A0U1RRK4 108 aa12.58□□□□□ -0.4
BEST1-203ENST00000524877 RPL39P62891 51 aaKnown RBP12.58□□□□□ -0.4
BEST1-203ENST00000524877 TIMM17AQ99595 171 aa12.57□□□□□ -0.4
BEST1-203ENST00000524877 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
BEST1-203ENST00000524877 USP17L23D6RBM5 183 aa12.56□□□□□ -0.4
BEST1-203ENST00000524877 ZFAND2AQ8N6M9 145 aa12.56□□□□□ -0.4
BEST1-203ENST00000524877 EXPH5Q8NEV8 1989 aa12.56□□□□□ -0.4
BEST1-203ENST00000524877 C4orf48Q5BLP8 95 aa12.56□□□□□ -0.4
BEST1-203ENST00000524877 Q8N2B8 174 aa12.56□□□□□ -0.4
BEST1-203ENST00000524877 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
BEST1-203ENST00000524877 C20orf203Q8NBC4 194 aa12.55□□□□□ -0.4
BEST1-203ENST00000524877 NEXN-AS1Q8NBZ9 246 aa12.54□□□□□ -0.4
BEST1-203ENST00000524877 ODF3L2Q3SX64 289 aa12.54□□□□□ -0.4
BEST1-203ENST00000524877 IGKV2-24A0A0C4DH68 120 aa12.53□□□□□ -0.4
BEST1-203ENST00000524877 KRTAP24-1Q3LI83 254 aa12.53□□□□□ -0.4
BEST1-203ENST00000524877 CHCHD10Q8WYQ3 142 aaPredicted RBP12.53□□□□□ -0.4
BEST1-203ENST00000524877 MRPS12O15235 138 aaKnown RBP12.53□□□□□ -0.4
BEST1-203ENST00000524877 TRBV6-8A0A0A6YYG3 113 aa12.52□□□□□ -0.4
BEST1-203ENST00000524877 DEFB105AQ8NG35 78 aa12.52□□□□□ -0.4
BEST1-203ENST00000524877 ATRXP46100 2492 aa12.52□□□□□ -0.41
BEST1-203ENST00000524877 SERTAD4-AS1Q5TG53 156 aa12.52□□□□□ -0.41
BEST1-203ENST00000524877 SNURFQ9Y675 71 aa12.52□□□□□ -0.41
BEST1-203ENST00000524877 ENHOQ6UWT2 76 aa12.52□□□□□ -0.41
BEST1-203ENST00000524877 LECT2O14960 151 aa12.51□□□□□ -0.41
BEST1-203ENST00000524877 LELP1Q5T871 98 aa12.51□□□□□ -0.41
BEST1-203ENST00000524877 OPRPNQ99935 248 aaPredicted RBP12.51□□□□□ -0.41
BEST1-203ENST00000524877 PDE6GP18545 87 aa12.51□□□□□ -0.41
BEST1-203ENST00000524877 C7orf33Q8WU49 177 aa12.51□□□□□ -0.41
BEST1-203ENST00000524877 B9D2Q9BPU9 175 aa12.5□□□□□ -0.41
BEST1-203ENST00000524877 TP73-AS1Q9UF72 201 aa12.5□□□□□ -0.41
BEST1-203ENST00000524877 TMEM256-PLSCR3K7ERE1 68 aa12.5□□□□□ -0.41
BEST1-203ENST00000524877 IGHV1-58A0A0C4DH39 117 aa12.5□□□□□ -0.41
BEST1-203ENST00000524877 KLLNB2CW77 178 aa12.49□□□□□ -0.41
BEST1-203ENST00000524877 EDN2P20800 178 aa12.49□□□□□ -0.41
BEST1-203ENST00000524877 MIAQ16674 131 aa12.49□□□□□ -0.41
BEST1-203ENST00000524877 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
BEST1-203ENST00000524877 CSPG4Q6UVK1 2322 aa12.49□□□□□ -0.41
BEST1-203ENST00000524877 NCR3O14931 201 aa12.49□□□□□ -0.41
BEST1-203ENST00000524877 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
BEST1-203ENST00000524877 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
BEST1-203ENST00000524877 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.47□□□□□ -0.41
BEST1-203ENST00000524877 YPEL4Q96NS1 127 aa12.47□□□□□ -0.41
BEST1-203ENST00000524877 C11orf86A6NJI1 115 aa12.46□□□□□ -0.41
BEST1-203ENST00000524877 LINC00467Q9BRT7 94 aa12.46□□□□□ -0.41
BEST1-203ENST00000524877 SHANK1Q9Y566 2161 aa12.46□□□□□ -0.41
BEST1-203ENST00000524877 PIEZO2Q9H5I5 2752 aa12.46□□□□□ -0.42
BEST1-203ENST00000524877 SOSTDC1Q6X4U4 206 aa12.45□□□□□ -0.42
BEST1-203ENST00000524877 CEMP1Q6PRD7 247 aaPredicted RBP12.45□□□□□ -0.42
BEST1-203ENST00000524877 PRR15LQ9BU68 103 aa12.45□□□□□ -0.42
BEST1-203ENST00000524877 MRGPRG-AS1Q2M3A8 158 aa12.45□□□□□ -0.42
BEST1-203ENST00000524877 IGLV2-8P01709 118 aa12.44□□□□□ -0.42
BEST1-203ENST00000524877 LINC00322Q6ZN03 302 aaPredicted RBP12.44□□□□□ -0.42
BEST1-203ENST00000524877 TRBV27A0A0K0K1C4 114 aa12.43□□□□□ -0.42
BEST1-203ENST00000524877 M0QY20 66 aa12.43□□□□□ -0.42
BEST1-203ENST00000524877 HIVEP3Q5T1R4 2406 aa12.43□□□□□ -0.42
BEST1-203ENST00000524877 PRR14LQ5THK1 2151 aa12.42□□□□□ -0.42
BEST1-203ENST00000524877 C9orf85Q96MD7 179 aa12.42□□□□□ -0.42
BEST1-203ENST00000524877 NAV3Q8IVL0 2385 aa12.41□□□□□ -0.42
BEST1-203ENST00000524877 PRR9Q5T870 116 aa12.41□□□□□ -0.42
BEST1-203ENST00000524877 DAND5Q8N907 189 aa12.41□□□□□ -0.42
BEST1-203ENST00000524877 Q8N976 141 aa12.41□□□□□ -0.42
BEST1-203ENST00000524877 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
BEST1-203ENST00000524877 C2orf91Q6ZV80 131 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 629.8 ms