RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ADAMTS12P58397 1594 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 MRC1P22897 1456 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 CLIP1P30622 1438 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 TRGV2A0A075B6R0 118 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 A0A087WTM6 91 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 LOC285095A0A1B0GVY8 99 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 EFNA4P52798 201 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 LINC00208Q96KT6 92 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 V9GYH0 126 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 MYOM1P52179 1685 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 ARHGEF5Q12774 1597 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 BAHCC1Q9P281 2608 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 DIP2CQ9Y2E4 1556 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 ABCA1O95477 2261 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 KANTRA0A1W2PQU2 76 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 F2Z2F3 143 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 BCE1O60756 84 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 SNRPFP62306 86 aaKnown RBP1.92□□□□□ -2.1
SKP1-209ENST00000522552 TMEM170BQ5T4T1 132 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 Q86TA4 180 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 LINC01600Q96MT4 127 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 TMEM14BQ9NUH8 114 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 HMGXB3Q12766 1538 aa1.92□□□□□ -2.1
SKP1-209ENST00000522552 H3BUT2 72 aa1.91□□□□□ -2.1
SKP1-209ENST00000522552 PRB2P02812 416 aaPredicted RBP1.91□□□□□ -2.1
SKP1-209ENST00000522552 CCL18P55774 89 aa1.91□□□□□ -2.1
SKP1-209ENST00000522552 GDF5OSQ5U4N7 250 aa1.91□□□□□ -2.1
SKP1-209ENST00000522552 CFAP126Q5VTH2 177 aa1.91□□□□□ -2.1
SKP1-209ENST00000522552 ARL2-SNX15V9GYD0 113 aa1.91□□□□□ -2.1
SKP1-209ENST00000522552 V9GYV3 84 aa1.91□□□□□ -2.1
SKP1-209ENST00000522552 NOTCH2Q04721 2471 aa1.91□□□□□ -2.1
SKP1-209ENST00000522552 EHBP1L1Q8N3D4 1523 aa1.91□□□□□ -2.1
SKP1-209ENST00000522552 NCOA6Q14686 2063 aaPredicted RBP1.91□□□□□ -2.1
SKP1-209ENST00000522552 CFDP00746 253 aaPredicted RBP1.9□□□□□ -2.1
SKP1-209ENST00000522552 SMIM11AP58511 58 aa1.9□□□□□ -2.1
SKP1-209ENST00000522552 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.1
SKP1-209ENST00000522552 BRD3OSQ6XYD6 125 aa1.9□□□□□ -2.1
SKP1-209ENST00000522552 PPP1R1CQ8WVI7 109 aa1.9□□□□□ -2.1
SKP1-209ENST00000522552 R4GMQ9 66 aa1.9□□□□□ -2.1
SKP1-209ENST00000522552 ZC3H13Q5T200 1668 aaKnown RBP1.9□□□□□ -2.11
SKP1-209ENST00000522552 ASCC3Q8N3C0 2202 aaKnown RBP1.9□□□□□ -2.11
SKP1-209ENST00000522552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.9□□□□□ -2.114e-13■■□□□ 11.5
SKP1-209ENST00000522552 ZNF815PA8K554 130 aa1.9□□□□□ -2.11
SKP1-209ENST00000522552 FXYD1O00168 92 aa1.9□□□□□ -2.11
SKP1-209ENST00000522552 KRTAP10-1P60331 282 aa1.9□□□□□ -2.11
SKP1-209ENST00000522552 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
SKP1-209ENST00000522552 ANKARQ7Z5J8 1434 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 COL5A1P20908 1838 aaPredicted RBP1.89□□□□□ -2.11
SKP1-209ENST00000522552 PPRC1Q5VV67 1664 aaKnown RBP1.89□□□□□ -2.11
SKP1-209ENST00000522552 BTAF1O14981 1849 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 LAMA4Q16363 1823 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.89□□□□□ -2.11
SKP1-209ENST00000522552 F8VRH5 84 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 F8WEM9 126 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 J3QRE1 110 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 SAA2P0DJI9 122 aaPredicted RBP1.89□□□□□ -2.11
SKP1-209ENST00000522552 PSMG4Q5JS54 123 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 OBSCN-AS1Q96MR7 158 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 SIPA1L3O60292 1781 aaPredicted RBP1.89□□□□□ -2.11
SKP1-209ENST00000522552 ZFHX3Q15911 3703 aa1.89□□□□□ -2.11
SKP1-209ENST00000522552 KIF21AQ7Z4S6 1674 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 LTN1O94822 1766 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 M0R135 149 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 ACYP1P07311 99 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 WFDC6Q9BQY6 131 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 DNAJC13O75165 2243 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 ABCA8O94911 1581 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 NEXMIFQ5QGS0 1516 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 SCN7AQ01118 1682 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 NCOA2Q15596 1464 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 IQSEC2Q5JU85 1478 aa1.88□□□□□ -2.11
SKP1-209ENST00000522552 CFAP74Q9C0B2 1584 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 FAM223BA6NKX1 122 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 ZNF563Q8TA94 476 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 C18orf32Q8TCD1 76 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 AMELXQ99217 191 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 PSENENQ9NZ42 101 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 LINC01558Q9Y6Z2 57 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 MYO7AQ13402 2215 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 UGGT2Q9NYU1 1516 aa1.87□□□□□ -2.11
SKP1-209ENST00000522552 HMGN2P05204 90 aaKnown RBP1.86□□□□□ -2.11
SKP1-209ENST00000522552 IGKV4-1P06312 121 aa1.86□□□□□ -2.11
SKP1-209ENST00000522552 Q96NJ1 140 aa1.86□□□□□ -2.11
SKP1-209ENST00000522552 IQGAP3Q86VI3 1631 aa1.86□□□□□ -2.11
SKP1-209ENST00000522552 PTPN23Q9H3S7 1636 aa1.86□□□□□ -2.11
SKP1-209ENST00000522552 DEFB103AP81534 67 aa1.86□□□□□ -2.11
SKP1-209ENST00000522552 Q6ZQY7 126 aa1.86□□□□□ -2.11
SKP1-209ENST00000522552 CCL19Q99731 98 aa1.86□□□□□ -2.11
SKP1-209ENST00000522552 ZNF236Q9UL36 1845 aa1.86□□□□□ -2.11
SKP1-209ENST00000522552 KCPQ6ZWJ8 1503 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 C7orf77A4D0Y5 90 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 IQCF6A8MYZ5 107 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 M0R3E3 92 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 CAV3P56539 151 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 KRTAP12-2P59991 146 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 UNQ6190/PRO20217Q6UXQ8 127 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 BAGE2Q86Y30 109 aa1.85□□□□□ -2.11
SKP1-209ENST00000522552 PRR15LQ9BU68 103 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms