RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 CHD1O14646 1710 aa0.83□□□□□ -2.28
RNU6-27P-201ENST00000516146 BTAF1O14981 1849 aa0.82□□□□□ -2.28
RNU6-27P-201ENST00000516146 CNTLNQ9NXG0 1405 aa0.82□□□□□ -2.28
RNU6-27P-201ENST00000516146 TOPAZ1Q8N9V7 1692 aa0.82□□□□□ -2.28
RNU6-27P-201ENST00000516146 CACNA1HO95180 2353 aa0.82□□□□□ -2.28
RNU6-27P-201ENST00000516146 MRC2Q9UBG0 1479 aa0.82□□□□□ -2.28
RNU6-27P-201ENST00000516146 MANBALQ9NQG1 85 aa0.82□□□□□ -2.28
RNU6-27P-201ENST00000516146 LINC01558Q9Y6Z2 57 aa0.82□□□□□ -2.28
RNU6-27P-201ENST00000516146 KDM5AP29375 1690 aaKnown RBP0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 COX6CP09669 75 aa0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 S100A10P60903 97 aa0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 COX6A2Q02221 97 aa0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 Q0VG73 95 aa0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 MYO7BQ6PIF6 2116 aa0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 FAM213BQ8TBF2 198 aa0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 CDC42SE2Q9NRR3 84 aa0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 PDCD11Q14690 1871 aaKnown RBP0.81□□□□□ -2.28
RNU6-27P-201ENST00000516146 APCP25054 2843 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 KCPQ6ZWJ8 1503 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 CRYM-AS1A6NIL9 109 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 SFT2D2O95562 160 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 KRTAP4-1Q9BYQ7 146 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 NXT2Q9NPJ8 142 aaKnown RBP0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 FAIMQ9NVQ4 179 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 PRO1854Q9UHT4 67 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 AP4S1Q9Y587 144 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 CACNA1EQ15878 2313 aa0.8□□□□□ -2.28
RNU6-27P-201ENST00000516146 RAPGEF6Q8TEU7 1601 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 AKAP12Q02952 1782 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 TRAV22A0A0B4J277 110 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 S100A8P05109 93 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 TRAPPC2P0DI81 140 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 TRAPPC2BP0DI82 140 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 S100A3P33764 101 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 UBE2D3P61077 147 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 UBE2D2P62837 147 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 MEGF8Q7Z7M0 2845 aa0.79□□□□□ -2.28
RNU6-27P-201ENST00000516146 M0R143 59 aa0.78□□□□□ -2.28
RNU6-27P-201ENST00000516146 SSBP3-AS1Q7Z2R9 100 aa0.78□□□□□ -2.28
RNU6-27P-201ENST00000516146 VPS8Q8N3P4 1428 aa0.78□□□□□ -2.28
RNU6-27P-201ENST00000516146 TNCP24821 2201 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 A0A0D9SFI3 127 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 hADV29S1A0JD25 119 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 ZNF815PA8K554 130 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 MGPP08493 103 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 LINC00032P0C843 101 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 SEC11AP67812 179 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 HAMPP81172 84 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 ARL2-SNX15V9GYD0 113 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 ARHGEF5Q12774 1597 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 TOP2BQ02880 1626 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 PLCE1Q9P212 2302 aa0.77□□□□□ -2.29
RNU6-27P-201ENST00000516146 ZNF469Q96JG9 3925 aaPredicted RBP0.76□□□□□ -2.29
RNU6-27P-201ENST00000516146 FAM208BQ5VWN6 2430 aa0.76□□□□□ -2.29
RNU6-27P-201ENST00000516146 DIP2CQ9Y2E4 1556 aa0.76□□□□□ -2.29
RNU6-27P-201ENST00000516146 SHANK2Q9UPX8 1470 aa0.76□□□□□ -2.29
RNU6-27P-201ENST00000516146 ABCC5O15440 1437 aa0.76□□□□□ -2.29
RNU6-27P-201ENST00000516146 GNGT2O14610 69 aa0.76□□□□□ -2.29
RNU6-27P-201ENST00000516146 FCGBPQ9Y6R7 5405 aaPredicted RBP0.76□□□□□ -2.29
RNU6-27P-201ENST00000516146 HMGXB3Q12766 1538 aa0.75□□□□□ -2.29
RNU6-27P-201ENST00000516146 EHBP1L1Q8N3D4 1523 aa0.75□□□□□ -2.29
RNU6-27P-201ENST00000516146 NDUFC1O43677 76 aa0.75□□□□□ -2.29
RNU6-27P-201ENST00000516146 IGLC1P0CG04 106 aa0.75□□□□□ -2.29
RNU6-27P-201ENST00000516146 NCMAPQ5T1S8 102 aa0.75□□□□□ -2.29
RNU6-27P-201ENST00000516146 DPY30Q9C005 99 aa0.75□□□□□ -2.29
RNU6-27P-201ENST00000516146 F8P00451 2351 aa0.75□□□□□ -2.29
RNU6-27P-201ENST00000516146 GAPVD1Q14C86 1478 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 FYCO1Q9BQS8 1478 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 Q6JHZ5 121 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 SFTA2Q6UW10 78 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 SPINK6Q6UWN8 80 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 FAM223AQ8IWN6 122 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 LINC00472Q9H8W2 130 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 BDP1A6H8Y1 2624 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 TTC28Q96AY4 2481 aa0.74□□□□□ -2.29
RNU6-27P-201ENST00000516146 TEX14Q8IWB6 1497 aa0.73□□□□□ -2.29
RNU6-27P-201ENST00000516146 CCNB3Q8WWL7 1395 aa0.73□□□□□ -2.29
RNU6-27P-201ENST00000516146 ANKRD26Q9UPS8 1709 aa0.73□□□□□ -2.29
RNU6-27P-201ENST00000516146 MPC2O95563 127 aa0.73□□□□□ -2.29
RNU6-27P-201ENST00000516146 CNFNQ9BYD5 112 aa0.73□□□□□ -2.29
RNU6-27P-201ENST00000516146 ERCC6L2Q5T890 1561 aa0.73□□□□□ -2.29
RNU6-27P-201ENST00000516146 SCN7AQ01118 1682 aa0.72□□□□□ -2.29
RNU6-27P-201ENST00000516146 LRP6O75581 1613 aa0.72□□□□□ -2.29
RNU6-27P-201ENST00000516146 MT-ATP8P03928 68 aa0.72□□□□□ -2.29
RNU6-27P-201ENST00000516146 SAA2P0DJI9 122 aaPredicted RBP0.72□□□□□ -2.29
RNU6-27P-201ENST00000516146 PKIAP61925 76 aa0.72□□□□□ -2.29
RNU6-27P-201ENST00000516146 PMCHL2Q9BQD1 86 aa0.72□□□□□ -2.29
RNU6-27P-201ENST00000516146 SPCS1Q9Y6A9 102 aa0.72□□□□□ -2.29
RNU6-27P-201ENST00000516146 NUP188Q5SRE5 1749 aa0.72□□□□□ -2.29
RNU6-27P-201ENST00000516146 MACF1Q9UPN3 7388 aaKnown RBP0.71□□□□□ -2.3
RNU6-27P-201ENST00000516146 GOLGA4Q13439 2230 aaKnown RBP0.71□□□□□ -2.3
RNU6-27P-201ENST00000516146 A0A1B0GWA3 101 aa0.71□□□□□ -2.3
RNU6-27P-201ENST00000516146 ATOX1O00244 68 aa0.71□□□□□ -2.3
RNU6-27P-201ENST00000516146 UBA52P62987 128 aaKnown RBP0.71□□□□□ -2.3
RNU6-27P-201ENST00000516146 COL5A1-AS1Q5SY13 56 aa0.71□□□□□ -2.3
RNU6-27P-201ENST00000516146 TMEM263Q8WUH6 116 aaKnown RBP0.71□□□□□ -2.3
RNU6-27P-201ENST00000516146 ABCA12Q86UK0 2595 aa0.71□□□□□ -2.3
RNU6-27P-201ENST00000516146 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
RNU6-27P-201ENST00000516146 PRDM15P57071 1507 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms