RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 CCL18P55774 89 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 HSPE1P61604 102 aaKnown RBP-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 B2MP61769 119 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 DEFB110Q30KQ9 67 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 C9orf116Q5BN46 136 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 SPANXN1Q5VSR9 72 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 TAC4Q86UU9 113 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 OR13C6PQ8NH95 151 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 C10orf82Q8WW14 230 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 SH3BGRL3Q9H299 93 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 PARVGQ9HBI0 331 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 MRPL40Q9NQ50 206 aaKnown RBP-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 NDUFA4L2Q9NRX3 87 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 LAMTOR2Q9Y2Q5 125 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 ARL2BPQ9Y2Y0 163 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 MTORP42345 2549 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 CRYBG1Q9Y4K1 1723 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 MAP3K5Q99683 1374 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 TULP4Q9NRJ4 1543 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 MYOM1P52179 1685 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 LTN1O94822 1766 aa-0.6□□□□□ -2.5
RNU4-49P-201ENST00000516080 TOP2BQ02880 1626 aa-0.6□□□□□ -2.5
RNU4-49P-201ENST00000516080 PXDNQ92626 1479 aa-0.6□□□□□ -2.5
RNU4-49P-201ENST00000516080 DNHD1Q96M86 4753 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 DDX60LQ5H9U9 1706 aaKnown RBP-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 DAPK1P53355 1430 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 UQCRQO14949 82 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 TCRAP04437 139 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 CSN2P05814 226 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 RPL7P18124 248 aaKnown RBP-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 FGF7P21781 194 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 TPPP2P59282 170 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 RPS28P62857 69 aaKnown RBP-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 RPL19P84098 196 aaKnown RBP-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 PLECQ15149 4684 aaKnown RBP-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 S100A7L2Q5SY68 101 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 PPP1R2P3Q6NXS1 205 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 BAGE2Q86Y30 109 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 FAM24BQ8N5W8 94 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 MNS1Q8NEH6 495 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 NUP35Q8NFH5 326 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 SPTSSBQ8NFR3 76 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 ATP6V0E2Q8NHE4 81 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 PPP1R14BQ96C90 147 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 CARD19Q96LW7 228 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 AQP10Q96PS8 301 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 GINS3Q9BRX5 216 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 OTORQ9NRC9 128 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 FAIMQ9NVQ4 179 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 CRIPTQ9P021 101 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 NDUFA12Q9UI09 145 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 PRNDQ9UKY0 176 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 MGAM2Q2M2H8 2515 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 LRRK2Q5S007 2527 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 DNAH2Q9P225 4427 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 ACACBO00763 2458 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 VPS13DQ5THJ4 4388 aa-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 TARBP1Q13395 1621 aaKnown RBP-0.6□□□□□ -2.51
RNU4-49P-201ENST00000516080 PHLPP1O60346 1717 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 ABCA3Q99758 1704 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 TEX15Q9BXT5 2789 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 SYNMO15061 1565 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 YTHDC2Q9H6S0 1430 aaKnown RBP-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 LINC00959A0A1B0GUT2 108 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 UQCR11O14957 56 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 SMIM24O75264 130 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 FAM107AO95990 144 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 CST2P09228 141 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 MT1HL1P0DM35 61 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 UBA52P62987 128 aaKnown RBP-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 BTG2P78543 158 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 CLLU1Q5K131 121 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 ZNF818PQ6ZRF7 136 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 CEP19Q96LK0 163 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 TPT1P8Q9HAU6 139 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 CDC42SE2Q9NRR3 84 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 CBLN4Q9NTU7 201 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 ARMC1Q9NVT9 282 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 CDKN2A-AS1Q9UH64 79 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 SS18L2Q9UHA2 77 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 LINC00312Q9Y6C7 94 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 SPENQ96T58 3664 aaKnown RBP-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 ADCY9O60503 1353 aa-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 PARP4Q9UKK3 1724 aaKnown RBP-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 NKTRP30414 1462 aaKnown RBP-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 GCN1Q92616 2671 aaKnown RBP-0.61□□□□□ -2.51
RNU4-49P-201ENST00000516080 ITPR1Q14643 2758 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 ANK3Q12955 4377 aaKnown RBP-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 CMYA5Q8N3K9 4069 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 SHROOM2Q13796 1616 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 TRBV7-3A0A075B6L6 115 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 PIGBOS1A0A0B4J2F0 54 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 TRBV7-6A0A0J9YX20 115 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 CCL22O00626 93 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 SNCGO76070 127 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 SLC25A5P05141 298 aaKnown RBP-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 MGPP08493 103 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 PAEPP09466 180 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 TCTAP57738 103 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 SEC11AP67812 179 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms