RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 FYCO1Q9BQS8 1478 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 MUC22E2RYF6 1773 aaPredicted RBP0.65□□□□□ -2.3
SUB1-204ENST00000504016 F5P12259 2224 aa0.65□□□□□ -2.3
SUB1-204ENST00000504016 ZNF609O15014 1411 aa0.65□□□□□ -2.3
SUB1-204ENST00000504016 PLXNA1Q9UIW2 1896 aa0.65□□□□□ -2.3
SUB1-204ENST00000504016 TRAV22A0A0B4J277 110 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 A0A0D9SFI3 127 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 GYPAP02724 150 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 SPINK7P58062 85 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 TRGV9Q99603 122 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 PMCHL2Q9BQD1 86 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 ARL2-SNX15V9GYD0 113 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 LAMA4Q16363 1823 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 GAPVD1Q14C86 1478 aa0.65□□□□□ -2.31
SUB1-204ENST00000504016 ZNF469Q96JG9 3925 aaPredicted RBP0.64□□□□□ -2.31
SUB1-204ENST00000504016 MYH8P13535 1937 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 FBN2P35556 2912 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 A0A1B0GWA3 101 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 hADV29S1A0JD25 119 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 PMCHL1Q16048 86 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 SPATA8Q6RVD6 105 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 SERP2Q8N6R1 65 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 FAM213BQ8TBF2 198 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 PATJQ8NI35 1801 aa0.64□□□□□ -2.31
SUB1-204ENST00000504016 LAMC3Q9Y6N6 1575 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 GOLGA3Q08378 1498 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 UQCRHLA0A096LP55 91 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 A0A0D9SG42 100 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 UQCRHP07919 91 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 NMBP08949 121 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 SMIM11AP58511 58 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 GNG2P59768 71 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 COX6A2Q02221 97 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 PRO1933Q9H354 126 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 AHCTF1Q8WYP5 2266 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 ABCC5O15440 1437 aa0.63□□□□□ -2.31
SUB1-204ENST00000504016 DOCK2Q92608 1830 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 SPHKAPQ2M3C7 1700 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 PVALEFA0A1B0GWK0 134 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 MT-ATP8P03928 68 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 IGLC1P0CG04 106 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 FAUP35544 74 aaKnown RBP0.62□□□□□ -2.31
SUB1-204ENST00000504016 HMGN3Q15651 99 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 ALKAL2Q6UX46 152 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 TMEM263Q8WUH6 116 aaKnown RBP0.62□□□□□ -2.31
SUB1-204ENST00000504016 SNHG12Q9BXW3 62 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 LINC00846Q9NV44 126 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 CACFD1Q9UGQ2 172 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 SPCS1Q9Y6A9 102 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 ZMYM4Q5VZL5 1548 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 ZNF462Q96JM2 2506 aa0.62□□□□□ -2.31
SUB1-204ENST00000504016 ABCC10Q5T3U5 1492 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 MAGI1Q96QZ7 1491 aaPredicted RBP0.61□□□□□ -2.31
SUB1-204ENST00000504016 TANC1Q9C0D5 1861 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 TRBV25-1A0A075B6N4 114 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 ZNF815PA8K554 130 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 BCE1O60756 84 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 HAMPP81172 84 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 PYY3Q5JQD4 70 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 PSMG4Q5JS54 123 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 Q6JHZ5 121 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 ZNF720Q7Z2F6 126 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 FAM223AQ8IWN6 122 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 TROQ12816 1431 aaPredicted RBP0.61□□□□□ -2.31
SUB1-204ENST00000504016 SMARCA2P51531 1590 aa0.61□□□□□ -2.31
SUB1-204ENST00000504016 TCHHQ07283 1943 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 ANKRD36BQ8N2N9 1353 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 PRDM15P57071 1507 aaPredicted RBP0.6□□□□□ -2.31
SUB1-204ENST00000504016 GOLGA4Q13439 2230 aaKnown RBP0.6□□□□□ -2.31
SUB1-204ENST00000504016 ROBO1Q9Y6N7 1651 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 MAP2P11137 1827 aaKnown RBP0.6□□□□□ -2.31
SUB1-204ENST00000504016 TRBV7-7A0A0K0K1E9 115 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 SYS1-DBNDD2H3BUS1 97 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 CNFNQ9BYD5 112 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 PLAC8Q9NZF1 115 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 RABAC1Q9UI14 185 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 LRRC37A2A6NM11 1700 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 MLH3Q9UHC1 1453 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 LOC285556D6RIA3 1793 aa0.6□□□□□ -2.31
SUB1-204ENST00000504016 ARFGEF1Q9Y6D6 1849 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 EHBP1L1Q8N3D4 1523 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 ABCC2Q92887 1545 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 DOCK1Q14185 1865 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 APCP25054 2843 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 DIP2CQ9Y2E4 1556 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 ASXL3Q9C0F0 2248 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 A0A0G2JND7 137 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 TRBV6-1A0A0K0K1D8 114 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 G3V318 75 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 H3BQF6 201 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 SFTA2Q6UW10 78 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 SSBP3-AS1Q7Z2R9 100 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 SPRR4Q96PI1 79 aa0.59□□□□□ -2.31
SUB1-204ENST00000504016 FAM103A1Q9BTL3 118 aaKnown RBP0.59□□□□□ -2.31
SUB1-204ENST00000504016 SIPA1L3O60292 1781 aaPredicted RBP0.59□□□□□ -2.32
SUB1-204ENST00000504016 FAM208BQ5VWN6 2430 aa0.59□□□□□ -2.32
SUB1-204ENST00000504016 RAPGEF6Q8TEU7 1601 aa0.59□□□□□ -2.32
SUB1-204ENST00000504016 BDP1A6H8Y1 2624 aa0.59□□□□□ -2.32
SUB1-204ENST00000504016 MYOM1P52179 1685 aa0.59□□□□□ -2.32
SUB1-204ENST00000504016 UNC13BO14795 1591 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms