RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
C4A-259ENST00000498271 COL5A1P20908 1838 aaPredicted RBP11.26□□□□□ -0.61
C4A-259ENST00000498271 M0QY20 66 aa11.26□□□□□ -0.61
C4A-259ENST00000498271 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
C4A-259ENST00000498271 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
C4A-259ENST00000498271 SMIM9A6NGZ8 99 aa11.26□□□□□ -0.61
C4A-259ENST00000498271 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
C4A-259ENST00000498271 KIAA1549Q9HCM3 1950 aa11.26□□□□□ -0.61
C4A-259ENST00000498271 M0QXV9 152 aa11.25□□□□□ -0.61
C4A-259ENST00000498271 C14orf177Q52M58 125 aa11.25□□□□□ -0.61
C4A-259ENST00000498271 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
C4A-259ENST00000498271 CPAMD8Q8IZJ3 1885 aa11.25□□□□□ -0.61
C4A-259ENST00000498271 A0A0U1RQV1 116 aa11.25□□□□□ -0.61
C4A-259ENST00000498271 A6NDX4 124 aa11.25□□□□□ -0.61
C4A-259ENST00000498271 PRB2P02812 416 aaPredicted RBP11.25□□□□□ -0.61
C4A-259ENST00000498271 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
C4A-259ENST00000498271 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
C4A-259ENST00000498271 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
C4A-259ENST00000498271 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
C4A-259ENST00000498271 LYRM9A8MSI8 78 aa11.22□□□□□ -0.61
C4A-259ENST00000498271 HILS1P60008 231 aa11.22□□□□□ -0.61
C4A-259ENST00000498271 HCFC1P51610 2035 aa11.22□□□□□ -0.61
C4A-259ENST00000498271 UBE2D1P51668 147 aa11.22□□□□□ -0.61
C4A-259ENST00000498271 SERP1Q9Y6X1 66 aa11.22□□□□□ -0.61
C4A-259ENST00000498271 EBI3Q14213 229 aa11.22□□□□□ -0.61
C4A-259ENST00000498271 ZFAND3Q9H8U3 227 aa11.22□□□□□ -0.61
C4A-259ENST00000498271 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
C4A-259ENST00000498271 PLXNB1O43157 2135 aa11.21□□□□□ -0.61
C4A-259ENST00000498271 UBE2D3P61077 147 aa11.21□□□□□ -0.61
C4A-259ENST00000498271 UBE2D2P62837 147 aa11.21□□□□□ -0.61
C4A-259ENST00000498271 TNFRSF13BO14836 293 aaPredicted RBP11.21□□□□□ -0.62
C4A-259ENST00000498271 C11orf71Q6IPW1 123 aa11.21□□□□□ -0.62
C4A-259ENST00000498271 INAFM1C9JVW0 142 aa11.2□□□□□ -0.62
C4A-259ENST00000498271 C4orf3Q8WVX3 66 aa11.2□□□□□ -0.62
C4A-259ENST00000498271 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
C4A-259ENST00000498271 FAM19A3Q7Z5A8 133 aa11.2□□□□□ -0.62
C4A-259ENST00000498271 DNAJC9-AS1A6NH13 148 aa11.2□□□□□ -0.62
C4A-259ENST00000498271 K7EQG2 157 aa11.19□□□□□ -0.62
C4A-259ENST00000498271 PIEZO2Q9H5I5 2752 aa11.19□□□□□ -0.62
C4A-259ENST00000498271 IGF1P05019 195 aa11.19□□□□□ -0.62
C4A-259ENST00000498271 SONP18583 2426 aaKnown RBP11.18□□□□□ -0.62
C4A-259ENST00000498271 PTPN13Q12923 2485 aa11.18□□□□□ -0.62
C4A-259ENST00000498271 EML5Q05BV3 1969 aa11.18□□□□□ -0.62
C4A-259ENST00000498271 SLPIP03973 132 aa11.18□□□□□ -0.62
C4A-259ENST00000498271 TSHBP01222 138 aa11.18□□□□□ -0.62
C4A-259ENST00000498271 Q6ZS46 218 aa11.18□□□□□ -0.62
C4A-259ENST00000498271 MAP6D1Q9H9H5 199 aa11.18□□□□□ -0.62
C4A-259ENST00000498271 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
C4A-259ENST00000498271 F8W735 103 aaPredicted RBP11.16□□□□□ -0.62
C4A-259ENST00000498271 WFDC11Q8NEX6 87 aa11.16□□□□□ -0.62
C4A-259ENST00000498271 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
C4A-259ENST00000498271 SEC61GP60059 68 aa11.16□□□□□ -0.62
C4A-259ENST00000498271 EXPH5Q8NEV8 1989 aa11.15□□□□□ -0.62
C4A-259ENST00000498271 LY6G6DO95868 133 aa11.15□□□□□ -0.62
C4A-259ENST00000498271 IGHV4-31P0DP07 118 aa11.15□□□□□ -0.62
C4A-259ENST00000498271 KLK12Q9UKR0 248 aa11.14□□□□□ -0.63
C4A-259ENST00000498271 RNASE3P12724 160 aaKnown RBP11.14□□□□□ -0.63
C4A-259ENST00000498271 HRCT1Q6UXD1 115 aa11.14□□□□□ -0.63
C4A-259ENST00000498271 MUC7Q8TAX7 377 aa11.14□□□□□ -0.63
C4A-259ENST00000498271 CSPG4Q6UVK1 2322 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 IGIPA6NJ69 53 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 UBE2AP49459 152 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 Q8N6K4 173 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 SNURFQ9Y675 71 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 CEP350Q5VT06 3117 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 H0Y9J4 135 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 REG3AQ06141 175 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
C4A-259ENST00000498271 IGF2RP11717 2491 aa11.12□□□□□ -0.63
C4A-259ENST00000498271 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
C4A-259ENST00000498271 CCKP06307 115 aa11.12□□□□□ -0.63
C4A-259ENST00000498271 SCXQ7RTU7 201 aa11.12□□□□□ -0.63
C4A-259ENST00000498271 C11orf45Q8TAV5 145 aa11.12□□□□□ -0.63
C4A-259ENST00000498271 DSCAMO60469 2012 aa11.11□□□□□ -0.63
C4A-259ENST00000498271 TRBV6-4A0A1B0GX49 114 aa11.11□□□□□ -0.63
C4A-259ENST00000498271 UBE2D4Q9Y2X8 147 aa11.11□□□□□ -0.63
C4A-259ENST00000498271 MIFP14174 115 aa11.11□□□□□ -0.63
C4A-259ENST00000498271 Q6ZTI0 123 aa11.11□□□□□ -0.63
C4A-259ENST00000498271 CHCHD10Q8WYQ3 142 aaPredicted RBP11.11□□□□□ -0.63
C4A-259ENST00000498271 C11orf21Q9P2W6 132 aa11.11□□□□□ -0.63
C4A-259ENST00000498271 SMIM11BQ8TCY0 68 aa11.11□□□□□ -0.63
C4A-259ENST00000498271 FAM19A5Q7Z5A7 132 aaPredicted RBP11.1□□□□□ -0.63
C4A-259ENST00000498271 KLLNB2CW77 178 aa11.1□□□□□ -0.63
C4A-259ENST00000498271 C9orf85Q96MD7 179 aa11.1□□□□□ -0.63
C4A-259ENST00000498271 PRR15LQ9BU68 103 aa11.1□□□□□ -0.63
C4A-259ENST00000498271 COX8CQ7Z4L0 72 aa11.1□□□□□ -0.63
C4A-259ENST00000498271 TRBV6-8A0A0A6YYG3 113 aa11.09□□□□□ -0.63
C4A-259ENST00000498271 CDSNQ15517 529 aa11.09□□□□□ -0.63
C4A-259ENST00000498271 LINC00269Q8N2A0 174 aa11.09□□□□□ -0.63
C4A-259ENST00000498271 NAV3Q8IVL0 2385 aa11.09□□□□□ -0.63
C4A-259ENST00000498271 Q6YL49 198 aa11.09□□□□□ -0.63
C4A-259ENST00000498271 COX17Q14061 63 aa11.08□□□□□ -0.64
C4A-259ENST00000498271 TLN1Q9Y490 2541 aaKnown RBP11.08□□□□□ -0.64
C4A-259ENST00000498271 DSCAML1Q8TD84 2053 aa11.08□□□□□ -0.64
C4A-259ENST00000498271 IGKV4-1P06312 121 aa11.07□□□□□ -0.64
C4A-259ENST00000498271 PSMG3-AS1Q96PY0 264 aa11.07□□□□□ -0.64
C4A-259ENST00000498271 GAS8-AS1O95177 125 aa11.07□□□□□ -0.64
C4A-259ENST00000498271 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
C4A-259ENST00000498271 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
C4A-259ENST00000498271 CSDC2Q9Y534 153 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 1132.8 ms