RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 DUX5Q96PT3 197 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 UBTD1Q9HAC8 227 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 VPREB3Q9UKI3 123 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 CSDC2Q9Y534 153 aaKnown RBP4.1□□□□□ -1.75
PHC3-217ENST00000497658 SVEP1Q4LDE5 3571 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 AKAP13Q12802 2813 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 A0A1W2PPR1 153 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 A8MTW9 85 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 A8MZ25 164 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 ATOX1O00244 68 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 IGHV3-53P01767 116 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 CRYGAP11844 174 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 LY6EQ16553 131 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 LINC00467Q9BRT7 94 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 Q9H8V8 135 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 TRAV13-2A0A0B4J235 113 aa4.09□□□□□ -1.75
PHC3-217ENST00000497658 J3KT08 172 aa4.09□□□□□ -1.75
PHC3-217ENST00000497658 RPL28P46779 137 aaKnown RBP4.09□□□□□ -1.75
PHC3-217ENST00000497658 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
PHC3-217ENST00000497658 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.75
PHC3-217ENST00000497658 SMCR5Q8TEV8 140 aa4.09□□□□□ -1.75
PHC3-217ENST00000497658 PIMREGQ9BSJ6 248 aa4.09□□□□□ -1.75
PHC3-217ENST00000497658 SPTBN1Q01082 2364 aaKnown RBP4.09□□□□□ -1.75
PHC3-217ENST00000497658 HRNRQ86YZ3 2850 aaPredicted RBP4.09□□□□□ -1.75
PHC3-217ENST00000497658 MED13LQ71F56 2210 aa4.09□□□□□ -1.76
PHC3-217ENST00000497658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.76
PHC3-217ENST00000497658 IGHV3OR16-10A0A075B7F0 116 aa4.09□□□□□ -1.76
PHC3-217ENST00000497658 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.76
PHC3-217ENST00000497658 EDN2P20800 178 aa4.09□□□□□ -1.76
PHC3-217ENST00000497658 UCNP55089 124 aa4.09□□□□□ -1.76
PHC3-217ENST00000497658 IGHV3-73A0A0B4J1V6 119 aa4.08□□□□□ -1.76
PHC3-217ENST00000497658 LINC00694P0DN24 101 aa4.08□□□□□ -1.76
PHC3-217ENST00000497658 IGHV4-38-2P0DP08 117 aa4.08□□□□□ -1.76
PHC3-217ENST00000497658 MALP21145 153 aa4.08□□□□□ -1.76
PHC3-217ENST00000497658 PROK1P58294 105 aa4.08□□□□□ -1.76
PHC3-217ENST00000497658 LINC00242Q5T6M2 205 aa4.08□□□□□ -1.76
PHC3-217ENST00000497658 PRIMA1Q86XR5 153 aa4.08□□□□□ -1.76
PHC3-217ENST00000497658 ZNF625Q96I27 306 aaPredicted RBP4.08□□□□□ -1.76
PHC3-217ENST00000497658 IGHV3OR16-12A0A075B7B8 117 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 SMIM1B2RUZ4 78 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 H0YGX0 51 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 RBMY1A1P0DJD3 496 aaKnown RBP4.07□□□□□ -1.76
PHC3-217ENST00000497658 RBMY1CP0DJD4 496 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 RBMY1FQ15415 496 aaKnown RBP4.07□□□□□ -1.76
PHC3-217ENST00000497658 Q8N2B8 174 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.07□□□□□ -1.76
PHC3-217ENST00000497658 SPTA1P02549 2419 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 RS1O15537 224 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 DNAL4O96015 105 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 HTN1P15515 57 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 COX6A2Q02221 97 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 GAGE2AQ6NT46 116 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 SOSTDC1Q6X4U4 206 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 Q6ZSN1 163 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 C22orf24Q9Y442 160 aa4.07□□□□□ -1.76
PHC3-217ENST00000497658 TTC28Q96AY4 2481 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 TRBV10-1A0A0K0K1A3 114 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 CRPP02741 224 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 SYNJ2BPP57105 145 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 RPL18AQ02543 176 aaKnown RBP4.06□□□□□ -1.76
PHC3-217ENST00000497658 C5orf47Q569G3 176 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 UBE2E2Q96LR5 201 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 C2orf48Q96LS8 159 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 ASH1LQ9NR48 2969 aaKnown RBP4.06□□□□□ -1.76
PHC3-217ENST00000497658 RIF1Q5UIP0 2472 aaKnown RBP4.06□□□□□ -1.76
PHC3-217ENST00000497658 PTPRZ1P23471 2315 aaPredicted RBP4.06□□□□□ -1.76
PHC3-217ENST00000497658 DOPEY2Q9Y3R5 2298 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 IGHV4-61A0A0C4DH41 118 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 KNCNA6PVL3 124 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 MSMBP08118 114 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 NBL1P41271 181 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 TMEM258P61165 79 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 Q6JHZ5 121 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 C11orf72Q8NBR9 251 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 C10orf105Q8TEF2 133 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 OBSCN-AS1Q96MR7 158 aa4.06□□□□□ -1.76
PHC3-217ENST00000497658 RELNP78509 3460 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 COL6A6A6NMZ7 2263 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 PTPRQQ9UMZ3 2332 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 F5H768 121 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 HOXD3P31249 432 aaPredicted RBP4.05□□□□□ -1.76
PHC3-217ENST00000497658 DEFB131AP59861 70 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 RPL36AP83881 106 aaKnown RBP4.05□□□□□ -1.76
PHC3-217ENST00000497658 SERP2Q8N6R1 65 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 C3orf56Q8N813 242 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 OR13C6PQ8NH95 151 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 RPL36ALQ969Q0 106 aaKnown RBP4.05□□□□□ -1.76
PHC3-217ENST00000497658 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 CDC42SE2Q9NRR3 84 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 Q9UF83 564 aa4.05□□□□□ -1.76
PHC3-217ENST00000497658 IGHV3-38A0A0C4DH36 116 aa4.04□□□□□ -1.76
PHC3-217ENST00000497658 B4DSR2 109 aa4.04□□□□□ -1.76
PHC3-217ENST00000497658 INSP01308 110 aa4.04□□□□□ -1.76
PHC3-217ENST00000497658 KLK5Q9Y337 293 aaPredicted RBP4.04□□□□□ -1.76
PHC3-217ENST00000497658 TRAV13-1A0A0B4J241 112 aa4.04□□□□□ -1.76
PHC3-217ENST00000497658 A0A0U1RRA0 63 aa4.04□□□□□ -1.76
PHC3-217ENST00000497658 S100A7L2Q5SY68 101 aa4.04□□□□□ -1.76
PHC3-217ENST00000497658 FAM19A5Q7Z5A7 132 aaPredicted RBP4.04□□□□□ -1.76
PHC3-217ENST00000497658 SND1-IT1Q9HBX3 110 aa4.04□□□□□ -1.76
PHC3-217ENST00000497658 ZFHX3Q15911 3703 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms