RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SPTA1P02549 2419 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 LRP2P98164 4655 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 MUC2Q02817 5179 aa-0.14□□□□□ -2.43
CD46-218ENST00000496723 SELENOWP63302 87 aa-0.14□□□□□ -2.43
CD46-218ENST00000496723 HAMPP81172 84 aa-0.14□□□□□ -2.43
CD46-218ENST00000496723 COX17Q14061 63 aa-0.14□□□□□ -2.43
CD46-218ENST00000496723 Q8IZM0 81 aa-0.14□□□□□ -2.43
CD46-218ENST00000496723 Q8N8P6 123 aa-0.14□□□□□ -2.43
CD46-218ENST00000496723 SNRNP25Q9BV90 132 aaKnown RBP-0.14□□□□□ -2.43
CD46-218ENST00000496723 NAA60Q9H7X0 242 aa-0.14□□□□□ -2.43
CD46-218ENST00000496723 NAIPQ13075 1403 aa-0.14□□□□□ -2.43
CD46-218ENST00000496723 TSC2P49815 1807 aa-0.15□□□□□ -2.43
CD46-218ENST00000496723 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
CD46-218ENST00000496723 Q5VSD8 79 aa-0.15□□□□□ -2.43
CD46-218ENST00000496723 LINC00470Q9BZP3 86 aa-0.15□□□□□ -2.43
CD46-218ENST00000496723 LPAP08519 4548 aa-0.15□□□□□ -2.43
CD46-218ENST00000496723 APC2O95996 2303 aa-0.15□□□□□ -2.43
CD46-218ENST00000496723 LAMC1P11047 1609 aa-0.16□□□□□ -2.43
CD46-218ENST00000496723 SETXQ7Z333 2677 aaKnown RBP-0.16□□□□□ -2.43
CD46-218ENST00000496723 S100A12P80511 92 aa-0.16□□□□□ -2.44
CD46-218ENST00000496723 LSM10Q969L4 123 aaKnown RBP-0.16□□□□□ -2.44
CD46-218ENST00000496723 TSC22D3Q99576 134 aa-0.16□□□□□ -2.44
CD46-218ENST00000496723 SRRM2Q9UQ35 2752 aaKnown RBP-0.16□□□□□ -2.44
CD46-218ENST00000496723 RIMS1Q86UR5 1692 aaKnown RBP-0.17□□□□□ -2.44
CD46-218ENST00000496723 BTAF1O14981 1849 aa-0.17□□□□□ -2.44
CD46-218ENST00000496723 GNG7O60262 68 aa-0.17□□□□□ -2.44
CD46-218ENST00000496723 DCDP81605 110 aaKnown RBP-0.17□□□□□ -2.44
CD46-218ENST00000496723 MEIG1Q5JSS6 88 aa-0.17□□□□□ -2.44
CD46-218ENST00000496723 TMEM170BQ5T4T1 132 aa-0.17□□□□□ -2.44
CD46-218ENST00000496723 TP53AIP1Q9HCN2 124 aa-0.17□□□□□ -2.44
CD46-218ENST00000496723 BCE1O60756 84 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 APOC3P02656 99 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 PPP3R2Q96LZ3 170 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 FAM107BQ9H098 131 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 PAPPAQ13219 1627 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 NBEAL1Q6ZS30 2694 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 MUC12Q9UKN1 5478 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 STAB2Q8WWQ8 2551 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 ACANP16112 2415 aa-0.18□□□□□ -2.44
CD46-218ENST00000496723 FLNBO75369 2602 aaKnown RBP-0.18□□□□□ -2.44
CD46-218ENST00000496723 CPSF1Q10570 1443 aaKnown RBP-0.19□□□□□ -2.44
CD46-218ENST00000496723 SHROOM2Q13796 1616 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 TGP01266 2768 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 COL6A3P12111 3177 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 MIF4GDA9UHW6 222 aaKnown RBP-0.19□□□□□ -2.44
CD46-218ENST00000496723 UQCR11O14957 56 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 NDUFA2O43678 99 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 TPPP2P59282 170 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 BTG2P78543 158 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 Q56UQ5 140 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 BAGE2Q86Y30 109 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 AMELXQ99217 191 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 MGST2Q99735 147 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 DYNLRB1Q9NP97 96 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 NDUFA4L2Q9NRX3 87 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 CUL7Q14999 1698 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 CHD8Q9HCK8 2581 aa-0.19□□□□□ -2.44
CD46-218ENST00000496723 GOLGA4Q13439 2230 aaKnown RBP-0.19□□□□□ -2.44
CD46-218ENST00000496723 DSTQ03001 7570 aaKnown RBP-0.2□□□□□ -2.44
CD46-218ENST00000496723 RAPGEF6Q8TEU7 1601 aa-0.2□□□□□ -2.44
CD46-218ENST00000496723 C10orf71Q711Q0 1435 aa-0.2□□□□□ -2.44
CD46-218ENST00000496723 MYOM1P52179 1685 aa-0.2□□□□□ -2.44
CD46-218ENST00000496723 MBD5Q9P267 1494 aa-0.2□□□□□ -2.44
CD46-218ENST00000496723 FXYD6-FXYD2A0A087WZ82 144 aa-0.2□□□□□ -2.44
CD46-218ENST00000496723 F8VRH5 84 aa-0.2□□□□□ -2.44
CD46-218ENST00000496723 Q6JHZ5 121 aa-0.2□□□□□ -2.44
CD46-218ENST00000496723 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.2□□□□□ -2.44
CD46-218ENST00000496723 NBPF19A0A087WUL8 3843 aa-0.2□□□□□ -2.44
CD46-218ENST00000496723 KDM5AP29375 1690 aaKnown RBP-0.21□□□□□ -2.44
CD46-218ENST00000496723 QRICH2Q9H0J4 1663 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 ROBO1Q9Y6N7 1651 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 NALCNQ8IZF0 1738 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 BCL9LQ86UU0 1499 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 ZFHX3Q15911 3703 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 TRBV7-3A0A075B6L6 115 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 APOC2P02655 101 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 HMGN1P05114 100 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 FGF7P21781 194 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 SPRR1AP35321 89 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 KRTAP6-1Q3LI64 71 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 PIGYQ3MUY2 71 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 C1orf54Q8WWF1 131 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 NF1P21359 2839 aa-0.21□□□□□ -2.44
CD46-218ENST00000496723 URB1O60287 2271 aaKnown RBP-0.21□□□□□ -2.44
CD46-218ENST00000496723 PDZD2O15018 2839 aa-0.22□□□□□ -2.44
CD46-218ENST00000496723 FLGP20930 4061 aaPredicted RBP-0.22□□□□□ -2.44
CD46-218ENST00000496723 TRBV6-1A0A0K0K1D8 114 aa-0.22□□□□□ -2.44
CD46-218ENST00000496723 LOC285095A0A1B0GVY8 99 aa-0.22□□□□□ -2.44
CD46-218ENST00000496723 IFNGP01579 166 aa-0.22□□□□□ -2.44
CD46-218ENST00000496723 CATR1Q13166 79 aa-0.22□□□□□ -2.44
CD46-218ENST00000496723 C8orf59Q8N0T1 100 aaPredicted RBP-0.22□□□□□ -2.44
CD46-218ENST00000496723 SPANXDQ9BXN6 97 aa-0.22□□□□□ -2.44
CD46-218ENST00000496723 KTN1Q86UP2 1357 aaKnown RBP-0.22□□□□□ -2.45
CD46-218ENST00000496723 TET3O43151 1660 aa-0.23□□□□□ -2.45
CD46-218ENST00000496723 IGLC7A0M8Q6 106 aa-0.23□□□□□ -2.45
CD46-218ENST00000496723 I3L2K1 104 aa-0.23□□□□□ -2.45
CD46-218ENST00000496723 K7EP13 123 aa-0.23□□□□□ -2.45
CD46-218ENST00000496723 SSSCA1O60232 199 aa-0.23□□□□□ -2.45
CD46-218ENST00000496723 MYOZ3Q8TDC0 251 aa-0.23□□□□□ -2.45
CD46-218ENST00000496723 CNOT1A5YKK6 2376 aaKnown RBP-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms