RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 SEC11AP67812 179 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 TDRG1Q3Y452 100 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 LINC00575Q6W349 94 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 WFDC10AQ9H1F0 79 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 PRO1933Q9H354 126 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 DYNLRB1Q9NP97 96 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 NUP188Q5SRE5 1749 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 DOCK10Q96BY6 2186 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 BAZ2BQ9UIF8 2168 aaKnown RBP0.71□□□□□ -2.3
USP9X-208ENST00000487625 PPRC1Q5VV67 1664 aaKnown RBP0.71□□□□□ -2.3
USP9X-208ENST00000487625 NINQ8N4C6 2090 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 PSME4Q14997 1843 aa0.71□□□□□ -2.3
USP9X-208ENST00000487625 ADAMTS12P58397 1594 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 ABCC1P33527 1531 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 CUX1P39880 1505 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 SHPRHQ149N8 1683 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 KIF21AQ7Z4S6 1674 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 TRBV25-1A0A075B6N4 114 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 TMEM14DPA8MWL7 114 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 HMGN4O00479 90 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 PRB4P10163 310 aaPredicted RBP0.7□□□□□ -2.3
USP9X-208ENST00000487625 EFNA4P52798 201 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 CAV3P56539 151 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 EDDM3BP56851 147 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 C10orf128Q5T292 105 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 FAM74A4Q5TZK3 123 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 OBSCN-AS1Q96MR7 158 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 WFDC6Q9BQY6 131 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 BPESC1Q9GZL8 116 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 UQCR10Q9UDW1 63 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 ARFGEF1Q9Y6D6 1849 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 TET1Q8NFU7 2136 aa0.7□□□□□ -2.3
USP9X-208ENST00000487625 LRRC37A2A6NM11 1700 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 SUPT6HQ7KZ85 1726 aaKnown RBP0.69□□□□□ -2.3
USP9X-208ENST00000487625 IFT172Q9UG01 1749 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 BAHCC1Q9P281 2608 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 SPAG17Q6Q759 2223 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 C10orf142B7Z368 130 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 DNAL4O96015 105 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 TFF1P04155 84 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 SAA2P0DJI9 122 aaPredicted RBP0.69□□□□□ -2.3
USP9X-208ENST00000487625 FXYD4P59646 89 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 Q6ZQY7 126 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 Q96NJ1 140 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 SPRR4Q96PI1 79 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 V9GYH0 126 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 ANKARQ7Z5J8 1434 aa0.69□□□□□ -2.3
USP9X-208ENST00000487625 PCDH15Q96QU1 1955 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 RGPD2P0DJD1 1756 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.68□□□□□ -2.3
USP9X-208ENST00000487625 F2Z2F3 143 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 CYB5AP00167 134 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 APOC3P02656 99 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 TRAPPC2P0DI81 140 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 TRAPPC2BP0DI82 140 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 PEA15Q15121 130 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 EDC4Q6P2E9 1401 aaKnown RBP0.68□□□□□ -2.3
USP9X-208ENST00000487625 S100A16Q96FQ6 103 aaKnown RBP0.68□□□□□ -2.3
USP9X-208ENST00000487625 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 S100A13Q99584 98 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 CCL19Q99731 98 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 TMEM14BQ9NUH8 114 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 PLAC8Q9NZF1 115 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 HIGD1BQ9P298 99 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 LINC01558Q9Y6Z2 57 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 V9GYV3 84 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 ZC3H13Q5T200 1668 aaKnown RBP0.68□□□□□ -2.3
USP9X-208ENST00000487625 RGPD8O14715 1765 aaPredicted RBP0.68□□□□□ -2.3
USP9X-208ENST00000487625 RGPD5Q99666 1765 aa0.68□□□□□ -2.3
USP9X-208ENST00000487625 NHSL1Q5SYE7 1610 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 CACNA1BQ00975 2339 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 FREM1Q5H8C1 2179 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 ABCA4P78363 2273 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 SNRNP200O75643 2136 aaKnown RBP0.67□□□□□ -2.3
USP9X-208ENST00000487625 SSC5DA1L4H1 1573 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 BTAF1O14981 1849 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 UQCRHLA0A096LP55 91 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 A0A0G2JND7 137 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 CHKB-CPT1BH3BT56 60 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 PPP1R17O96001 155 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 UQCRHP07919 91 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 ZNF137PP52743 207 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 KRTAP12-1P59990 96 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 SNRPFP62306 86 aaKnown RBP0.67□□□□□ -2.3
USP9X-208ENST00000487625 HMGN3Q15651 99 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 KRTAP21-3Q3LHN1 58 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 DEFB119Q8N690 84 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 ST20Q9HBF5 79 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 NXT2Q9NPJ8 142 aaKnown RBP0.67□□□□□ -2.3
USP9X-208ENST00000487625 MANBALQ9NQG1 85 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 LINC00846Q9NV44 126 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 R4GMQ9 66 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 DLG5Q8TDM6 1919 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 NEXMIFQ5QGS0 1516 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 ZMYM4Q5VZL5 1548 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 MED13Q9UHV7 2174 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 LTN1O94822 1766 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 KDM3BQ7LBC6 1761 aa0.67□□□□□ -2.3
USP9X-208ENST00000487625 TARBP1Q13395 1621 aaKnown RBP0.67□□□□□ -2.3
USP9X-208ENST00000487625 IQGAP3Q86VI3 1631 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 493.5 ms