RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 Q8N814 137 aa10.22□□□□□ -0.77
HDHD3-203ENST00000485934 MRPL18Q9H0U6 180 aaKnown RBP10.22□□□□□ -0.77
HDHD3-203ENST00000485934 SMCO4Q9NRQ5 59 aa10.22□□□□□ -0.77
HDHD3-203ENST00000485934 CDC42SE2Q9NRR3 84 aa10.22□□□□□ -0.77
HDHD3-203ENST00000485934 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
HDHD3-203ENST00000485934 SS18Q15532 418 aa10.21□□□□□ -0.77
HDHD3-203ENST00000485934 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.77
HDHD3-203ENST00000485934 BAALCQ8WXS3 180 aa10.21□□□□□ -0.77
HDHD3-203ENST00000485934 UBE2D4Q9Y2X8 147 aa10.21□□□□□ -0.77
HDHD3-203ENST00000485934 TRAPPC1Q9Y5R8 145 aa10.21□□□□□ -0.77
HDHD3-203ENST00000485934 TGIF2-C20orf24A0A0A6YYL0 155 aa10.2□□□□□ -0.78
HDHD3-203ENST00000485934 LINC01549A6NIU2 74 aa10.2□□□□□ -0.78
HDHD3-203ENST00000485934 KIAA1644Q3SXP7 199 aa10.2□□□□□ -0.78
HDHD3-203ENST00000485934 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
HDHD3-203ENST00000485934 DNAH2Q9P225 4427 aa10.2□□□□□ -0.78
HDHD3-203ENST00000485934 FRAS1Q86XX4 4008 aa10.2□□□□□ -0.78
HDHD3-203ENST00000485934 IGLV10-54A0A075B6I4 117 aa10.19□□□□□ -0.78
HDHD3-203ENST00000485934 IGKV3OR2-268A0A0C4DH90 116 aa10.19□□□□□ -0.78
HDHD3-203ENST00000485934 IFI27P40305 119 aaPredicted RBP10.19□□□□□ -0.78
HDHD3-203ENST00000485934 ALKBH7Q9BT30 221 aaPredicted RBP10.19□□□□□ -0.78
HDHD3-203ENST00000485934 C1orf196B1AJZ1 125 aa10.18□□□□□ -0.78
HDHD3-203ENST00000485934 MAPKAPK5-AS1Q8N8E1 139 aa10.18□□□□□ -0.78
HDHD3-203ENST00000485934 CYSLTR1Q9Y271 337 aa10.18□□□□□ -0.78
HDHD3-203ENST00000485934 PYGO1Q9Y3Y4 419 aa10.18□□□□□ -0.78
HDHD3-203ENST00000485934 IGLV5-52A0A0A0MRZ9 124 aa10.17□□□□□ -0.78
HDHD3-203ENST00000485934 NPSP0C0P6 89 aa10.17□□□□□ -0.78
HDHD3-203ENST00000485934 KRTAP10-2P60368 255 aa10.17□□□□□ -0.78
HDHD3-203ENST00000485934 MRPS36P82909 103 aaKnown RBP10.17□□□□□ -0.78
HDHD3-203ENST00000485934 CHCHD10Q8WYQ3 142 aaPredicted RBP10.17□□□□□ -0.78
HDHD3-203ENST00000485934 LINC00959A0A1B0GUT2 108 aa10.16□□□□□ -0.78
HDHD3-203ENST00000485934 LECT2O14960 151 aa10.16□□□□□ -0.78
HDHD3-203ENST00000485934 PAPPA-AS1Q5QFB9 102 aa10.16□□□□□ -0.78
HDHD3-203ENST00000485934 USP17L23D6RBM5 183 aa10.15□□□□□ -0.78
HDHD3-203ENST00000485934 GCSHP23434 173 aa10.15□□□□□ -0.78
HDHD3-203ENST00000485934 RPL39P62891 51 aaKnown RBP10.15□□□□□ -0.78
HDHD3-203ENST00000485934 KRTAP26-1Q6PEX3 210 aa10.15□□□□□ -0.78
HDHD3-203ENST00000485934 C2orf66Q6UXQ4 117 aa10.15□□□□□ -0.78
HDHD3-203ENST00000485934 Q6ZN92 141 aa10.15□□□□□ -0.78
HDHD3-203ENST00000485934 FAT2Q9NYQ8 4349 aa10.14□□□□□ -0.79
HDHD3-203ENST00000485934 GAGE12HA6NDE8 117 aa10.14□□□□□ -0.79
HDHD3-203ENST00000485934 RAB5BP61020 215 aa10.14□□□□□ -0.79
HDHD3-203ENST00000485934 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
HDHD3-203ENST00000485934 FA2HQ7L5A8 372 aa10.14□□□□□ -0.79
HDHD3-203ENST00000485934 HECTD4Q9Y4D8 3996 aa10.14□□□□□ -0.79
HDHD3-203ENST00000485934 DNAH17Q9UFH2 4485 aa10.13□□□□□ -0.79
HDHD3-203ENST00000485934 AP5S1Q9NUS5 200 aa10.13□□□□□ -0.79
HDHD3-203ENST00000485934 XCL1P47992 114 aa10.12□□□□□ -0.79
HDHD3-203ENST00000485934 WFDC2Q14508 124 aa10.12□□□□□ -0.79
HDHD3-203ENST00000485934 CBLN2Q8IUK8 224 aa10.12□□□□□ -0.79
HDHD3-203ENST00000485934 TMEM141Q96I45 108 aa10.12□□□□□ -0.79
HDHD3-203ENST00000485934 YPEL4Q96NS1 127 aa10.12□□□□□ -0.79
HDHD3-203ENST00000485934 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
HDHD3-203ENST00000485934 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
HDHD3-203ENST00000485934 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
HDHD3-203ENST00000485934 TEX43Q6ZNM6 134 aa10.11□□□□□ -0.79
HDHD3-203ENST00000485934 Q6ZUT4 128 aa10.11□□□□□ -0.79
HDHD3-203ENST00000485934 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
HDHD3-203ENST00000485934 VCX2Q9H322 139 aa10.11□□□□□ -0.79
HDHD3-203ENST00000485934 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
HDHD3-203ENST00000485934 TOMM6Q96B49 74 aa10.1□□□□□ -0.79
HDHD3-203ENST00000485934 hDV102S1A0JD36 115 aa10.09□□□□□ -0.79
HDHD3-203ENST00000485934 IFITM10A6NMD0 228 aa10.09□□□□□ -0.79
HDHD3-203ENST00000485934 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
HDHD3-203ENST00000485934 LINC00614P0C842 121 aa10.09□□□□□ -0.79
HDHD3-203ENST00000485934 MALP21145 153 aa10.09□□□□□ -0.79
HDHD3-203ENST00000485934 FOXI1Q12951 378 aa10.09□□□□□ -0.79
HDHD3-203ENST00000485934 ERASQ7Z444 233 aa10.09□□□□□ -0.79
HDHD3-203ENST00000485934 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
HDHD3-203ENST00000485934 IGLV4-3A0A075B6K6 122 aa10.08□□□□□ -0.8
HDHD3-203ENST00000485934 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
HDHD3-203ENST00000485934 COX7A2LO14548 114 aa10.08□□□□□ -0.8
HDHD3-203ENST00000485934 APOMO95445 188 aa10.08□□□□□ -0.8
HDHD3-203ENST00000485934 RNASE13Q5GAN3 156 aaKnown RBP10.08□□□□□ -0.8
HDHD3-203ENST00000485934 C18orf32Q8TCD1 76 aa10.08□□□□□ -0.8
HDHD3-203ENST00000485934 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
HDHD3-203ENST00000485934 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
HDHD3-203ENST00000485934 PRSS1P07477 247 aa10.07□□□□□ -0.8
HDHD3-203ENST00000485934 SEC11AP67812 179 aa10.07□□□□□ -0.8
HDHD3-203ENST00000485934 OPRPNQ99935 248 aaPredicted RBP10.06□□□□□ -0.8
HDHD3-203ENST00000485934 GVQW2A0A096LPI5 108 aaPredicted RBP10.05□□□□□ -0.8
HDHD3-203ENST00000485934 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
HDHD3-203ENST00000485934 CNBPP62633 177 aaKnown RBP10.05□□□□□ -0.8
HDHD3-203ENST00000485934 PKIGQ9Y2B9 76 aa10.05□□□□□ -0.8
HDHD3-203ENST00000485934 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.04□□□□□ -0.8
HDHD3-203ENST00000485934 FUSP35637 526 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDHD3-203ENST00000485934 C9orf163Q8N9P6 203 aa10.04□□□□□ -0.8
HDHD3-203ENST00000485934 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
HDHD3-203ENST00000485934 CHCHD1Q96BP2 118 aaKnown RBP10.04□□□□□ -0.8
HDHD3-203ENST00000485934 AMELXQ99217 191 aa10.04□□□□□ -0.8
HDHD3-203ENST00000485934 PKHD1P08F94 4074 aa10.04□□□□□ -0.8
HDHD3-203ENST00000485934 KRTAP10-1P60331 282 aa10.03□□□□□ -0.8
HDHD3-203ENST00000485934 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
HDHD3-203ENST00000485934 DNAH11Q96DT5 4516 aa10.02□□□□□ -0.81
HDHD3-203ENST00000485934 IGHV3OR16-9A0A0B4J2B5 98 aa10.02□□□□□ -0.81
HDHD3-203ENST00000485934 COLCA2A8K830 154 aa10.02□□□□□ -0.81
HDHD3-203ENST00000485934 HBDP02042 147 aa10.02□□□□□ -0.81
HDHD3-203ENST00000485934 TRGC2P03986 189 aa10.02□□□□□ -0.81
HDHD3-203ENST00000485934 BAGE3Q86Y29 109 aa10.02□□□□□ -0.81
HDHD3-203ENST00000485934 PKD1P98161 4303 aa10.01□□□□□ -0.81
HDHD3-203ENST00000485934 ATP5LO75964 103 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms