RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 RBMY1A1P0DJD3 496 aaKnown RBP15.37■□□□□ 0.05
SDF4-206ENST00000478938 RBMY1CP0DJD4 496 aa15.37■□□□□ 0.05
SDF4-206ENST00000478938 COX6A2Q02221 97 aa15.37■□□□□ 0.05
SDF4-206ENST00000478938 RBMY1FQ15415 496 aaKnown RBP15.37■□□□□ 0.05
SDF4-206ENST00000478938 EPM2AB3EWF7 344 aa15.37■□□□□ 0.05
SDF4-206ENST00000478938 HIST2H2BCQ6DN03 193 aa15.36■□□□□ 0.05
SDF4-206ENST00000478938 HIST2H2BDQ6DRA6 164 aa15.36■□□□□ 0.05
SDF4-206ENST00000478938 AVPP01185 164 aa15.36■□□□□ 0.05
SDF4-206ENST00000478938 SERP1Q9Y6X1 66 aa15.36■□□□□ 0.05
SDF4-206ENST00000478938 CHCHD7Q9BUK0 85 aa15.35■□□□□ 0.05
SDF4-206ENST00000478938 XCL1P47992 114 aa15.35■□□□□ 0.05
SDF4-206ENST00000478938 XCL2Q9UBD3 114 aa15.35■□□□□ 0.05
SDF4-206ENST00000478938 LINC00467Q9BRT7 94 aa15.34■□□□□ 0.05
SDF4-206ENST00000478938 FAM19A1Q7Z5A9 133 aa15.34■□□□□ 0.05
SDF4-206ENST00000478938 OBSCN-AS1Q96MR7 158 aa15.34■□□□□ 0.05
SDF4-206ENST00000478938 C16orf95Q9H693 158 aa15.34■□□□□ 0.05
SDF4-206ENST00000478938 EDN2P20800 178 aa15.33■□□□□ 0.04
SDF4-206ENST00000478938 PSMB8P28062 276 aa15.33■□□□□ 0.04
SDF4-206ENST00000478938 COPS9Q8WXC6 57 aa15.32■□□□□ 0.04
SDF4-206ENST00000478938 RIF1Q5UIP0 2472 aaKnown RBP15.32■□□□□ 0.04
SDF4-206ENST00000478938 FP248Q71RG6 208 aaPredicted RBP15.31■□□□□ 0.04
SDF4-206ENST00000478938 ZFHX3Q15911 3703 aa15.31■□□□□ 0.04
SDF4-206ENST00000478938 IGLV5-45A0A087WSX0 123 aa15.31■□□□□ 0.04
SDF4-206ENST00000478938 H7BZZ5 65 aa15.31■□□□□ 0.04
SDF4-206ENST00000478938 LINC00337Q8N6G1 96 aa15.31■□□□□ 0.04
SDF4-206ENST00000478938 RHPN1-AS1Q9BWJ2 59 aa15.31■□□□□ 0.04
SDF4-206ENST00000478938 IGHV3-38A0A0C4DH36 116 aa15.3■□□□□ 0.04
SDF4-206ENST00000478938 IGLV5-39A0A0G2JS06 123 aa15.3■□□□□ 0.04
SDF4-206ENST00000478938 IGHV3-11P01762 117 aa15.29■□□□□ 0.04
SDF4-206ENST00000478938 CRPP02741 224 aa15.29■□□□□ 0.04
SDF4-206ENST00000478938 SLPIP03973 132 aa15.29■□□□□ 0.04
SDF4-206ENST00000478938 OTOGLQ3ZCN5 2332 aa15.29■□□□□ 0.04
SDF4-206ENST00000478938 NDUFA4O00483 81 aa15.29■□□□□ 0.04
SDF4-206ENST00000478938 ENHOQ6UWT2 76 aa15.29■□□□□ 0.04
SDF4-206ENST00000478938 ZFHX2Q9C0A1 2572 aaPredicted RBP15.28■□□□□ 0.04
SDF4-206ENST00000478938 A0A0U1RQV1 116 aa15.28■□□□□ 0.04
SDF4-206ENST00000478938 KNCNA6PVL3 124 aa15.28■□□□□ 0.04
SDF4-206ENST00000478938 SEC61GP60059 68 aa15.28■□□□□ 0.04
SDF4-206ENST00000478938 IGHV1OR15-1A0A075B7D0 117 aa15.28■□□□□ 0.04
SDF4-206ENST00000478938 MINOS1-NBL1R4GNA1 71 aa15.28■□□□□ 0.04
SDF4-206ENST00000478938 MUC6Q6W4X9 2439 aa15.27■□□□□ 0.04
SDF4-206ENST00000478938 PTPRZ1P23471 2315 aaPredicted RBP15.27■□□□□ 0.04
SDF4-206ENST00000478938 LECT2O14960 151 aa15.27■□□□□ 0.04
SDF4-206ENST00000478938 LYPD5Q6UWN5 251 aa15.27■□□□□ 0.03
SDF4-206ENST00000478938 SMIM11BQ8TCY0 68 aa15.27■□□□□ 0.03
SDF4-206ENST00000478938 SMIM1B2RUZ4 78 aa15.26■□□□□ 0.03
SDF4-206ENST00000478938 TRAV13-2A0A0B4J235 113 aa15.26■□□□□ 0.03
SDF4-206ENST00000478938 SPINK13Q1W4C9 94 aa15.26■□□□□ 0.03
SDF4-206ENST00000478938 Q6ZSN1 163 aa15.25■□□□□ 0.03
SDF4-206ENST00000478938 IGKV2-28A0A075B6P5 120 aa15.25■□□□□ 0.03
SDF4-206ENST00000478938 IGKV2D-28P01615 120 aa15.25■□□□□ 0.03
SDF4-206ENST00000478938 AKAP13Q12802 2813 aa15.25■□□□□ 0.03
SDF4-206ENST00000478938 IGHV3OR16-12A0A075B7B8 117 aa15.24■□□□□ 0.03
SDF4-206ENST00000478938 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.24■□□□□ 0.03
SDF4-206ENST00000478938 LINC00242Q5T6M2 205 aa15.24■□□□□ 0.03
SDF4-206ENST00000478938 OVOL2Q9BRP0 275 aa15.24■□□□□ 0.03
SDF4-206ENST00000478938 HTN1P15515 57 aa15.24■□□□□ 0.03
SDF4-206ENST00000478938 MIR7-3HGQ8N6C7 128 aa15.24■□□□□ 0.03
SDF4-206ENST00000478938 BRK1Q8WUW1 75 aa15.23■□□□□ 0.03
SDF4-206ENST00000478938 LINC00474Q9P2X8 69 aa15.23■□□□□ 0.03
SDF4-206ENST00000478938 DOPEY2Q9Y3R5 2298 aa15.22■□□□□ 0.03
SDF4-206ENST00000478938 CCKP06307 115 aa15.22■□□□□ 0.03
SDF4-206ENST00000478938 SS18Q15532 418 aa15.22■□□□□ 0.03
SDF4-206ENST00000478938 DEFB124Q8NES8 71 aa15.22■□□□□ 0.03
SDF4-206ENST00000478938 SMIM26A0A096LP01 95 aa15.21■□□□□ 0.03
SDF4-206ENST00000478938 DGAT2L7PQ6IED9 249 aa15.21■□□□□ 0.03
SDF4-206ENST00000478938 V9GYY9 64 aa15.21■□□□□ 0.03
SDF4-206ENST00000478938 PF4P02776 101 aa15.2■□□□□ 0.02
SDF4-206ENST00000478938 ZFP36P26651 326 aaKnown RBP15.2■□□□□ 0.02
SDF4-206ENST00000478938 C5orf56Q8N8D9 126 aa15.2■□□□□ 0.02
SDF4-206ENST00000478938 SNURFQ9Y675 71 aa15.2■□□□□ 0.02
SDF4-206ENST00000478938 SORL1Q92673 2214 aa15.2■□□□□ 0.02
SDF4-206ENST00000478938 SAA4P35542 130 aa15.19■□□□□ 0.02
SDF4-206ENST00000478938 CDSNQ15517 529 aa15.19■□□□□ 0.02
SDF4-206ENST00000478938 C1orf195Q5TG92 126 aa15.19■□□□□ 0.02
SDF4-206ENST00000478938 SND1-IT1Q9HBX3 110 aa15.19■□□□□ 0.02
SDF4-206ENST00000478938 COL6A6A6NMZ7 2263 aa15.18■□□□□ 0.02
SDF4-206ENST00000478938 PRM2P04554 102 aa15.18■□□□□ 0.02
SDF4-206ENST00000478938 RPL36AP83881 106 aaKnown RBP15.18■□□□□ 0.02
SDF4-206ENST00000478938 RPL36ALQ969Q0 106 aaKnown RBP15.18■□□□□ 0.02
SDF4-206ENST00000478938 RMI2Q96E14 147 aa15.17■□□□□ 0.02
SDF4-206ENST00000478938 ZNF292O60281 2723 aa15.17■□□□□ 0.02
SDF4-206ENST00000478938 ATP5EP2Q5VTU8 51 aa15.16■□□□□ 0.02
SDF4-206ENST00000478938 C19orf54Q5BKX5 351 aa15.16■□□□□ 0.02
SDF4-206ENST00000478938 S100A7L2Q5SY68 101 aa15.16■□□□□ 0.02
SDF4-206ENST00000478938 H0YGX0 51 aa15.15■□□□□ 0.02
SDF4-206ENST00000478938 F8WEM9 126 aa15.14■□□□□ 0.01
SDF4-206ENST00000478938 SIRPDQ9H106 197 aa15.14■□□□□ 0.01
SDF4-206ENST00000478938 C11orf72Q8NBR9 251 aa15.14■□□□□ 0.01
SDF4-206ENST00000478938 LINC01560Q8TB33 94 aa15.14■□□□□ 0.01
SDF4-206ENST00000478938 ORMDL1Q9P0S3 153 aa15.14■□□□□ 0.01
SDF4-206ENST00000478938 ANKHD1Q8IWZ3 2542 aaKnown RBP15.13■□□□□ 0.01
SDF4-206ENST00000478938 TRAV7A0A075B6U4 112 aa15.12■□□□□ 0.01
SDF4-206ENST00000478938 RBM3P98179 157 aaKnown RBP15.12■□□□□ 0.01
SDF4-206ENST00000478938 CELSR1Q9NYQ6 3014 aa15.12■□□□□ 0.01
SDF4-206ENST00000478938 BSNQ9UPA5 3926 aa15.11■□□□□ 0.01
SDF4-206ENST00000478938 IGFL3Q6UXB1 125 aa15.11■□□□□ 0.01
SDF4-206ENST00000478938 GVINP1Q7Z2Y8 2422 aa15.11■□□□□ 0.01
SDF4-206ENST00000478938 TRBV7-6A0A0J9YX20 115 aa15.11■□□□□ 0.01
SDF4-206ENST00000478938 KLKP1Q107X0 134 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms