RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SPATA12Q7Z6I5 190 aa17.79■□□□□ 0.44
CCM2-211ENST00000478582 C1orf43Q9BWL3 253 aa17.79■□□□□ 0.44
CCM2-211ENST00000478582 NXT2Q9NPJ8 142 aaKnown RBP17.79■□□□□ 0.44
CCM2-211ENST00000478582 TRAPPC1Q9Y5R8 145 aa17.79■□□□□ 0.44
CCM2-211ENST00000478582 LRCOL1A6NCL2 159 aa17.78■□□□□ 0.44
CCM2-211ENST00000478582 K7EMI3 77 aa17.78■□□□□ 0.44
CCM2-211ENST00000478582 CLPSL2Q6UWE3 100 aa17.78■□□□□ 0.44
CCM2-211ENST00000478582 OR5A1Q8NGJ0 315 aa17.78■□□□□ 0.44
CCM2-211ENST00000478582 TIMM21Q9BVV7 248 aa17.78■□□□□ 0.44
CCM2-211ENST00000478582 UBE2D4Q9Y2X8 147 aa17.78■□□□□ 0.44
CCM2-211ENST00000478582 TRAV8-4A0A0B4J246 113 aa17.77■□□□□ 0.44
CCM2-211ENST00000478582 MAPKAPK5-AS1Q8N8E1 139 aa17.77■□□□□ 0.44
CCM2-211ENST00000478582 EREGO14944 169 aa17.76■□□□□ 0.43
CCM2-211ENST00000478582 CDC42SE2Q9NRR3 84 aa17.76■□□□□ 0.43
CCM2-211ENST00000478582 IFI27P40305 119 aaPredicted RBP17.74■□□□□ 0.43
CCM2-211ENST00000478582 DGAT2L7PQ6IED9 249 aa17.74■□□□□ 0.43
CCM2-211ENST00000478582 KRTAP26-1Q6PEX3 210 aa17.74■□□□□ 0.43
CCM2-211ENST00000478582 RPL39P62891 51 aaKnown RBP17.73■□□□□ 0.43
CCM2-211ENST00000478582 ORMDL2Q53FV1 153 aa17.73■□□□□ 0.43
CCM2-211ENST00000478582 ZNF664Q8N3J9 261 aa17.73■□□□□ 0.43
CCM2-211ENST00000478582 KRTAP10-2P60368 255 aa17.72■□□□□ 0.43
CCM2-211ENST00000478582 SPANXA1Q9NS26 97 aa17.72■□□□□ 0.43
CCM2-211ENST00000478582 LINC01546A6NGU7 62 aa17.7■□□□□ 0.42
CCM2-211ENST00000478582 PRSS3P2Q8NHM4 247 aa17.7■□□□□ 0.42
CCM2-211ENST00000478582 IGLV10-54A0A075B6I4 117 aa17.69■□□□□ 0.42
CCM2-211ENST00000478582 BAALCQ8WXS3 180 aa17.69■□□□□ 0.42
CCM2-211ENST00000478582 PYGO1Q9Y3Y4 419 aa17.68■□□□□ 0.42
CCM2-211ENST00000478582 IGKV3OR2-268A0A0C4DH90 116 aa17.67■□□□□ 0.42
CCM2-211ENST00000478582 MRPS36P82909 103 aaKnown RBP17.67■□□□□ 0.42
CCM2-211ENST00000478582 WFDC2Q14508 124 aa17.67■□□□□ 0.42
CCM2-211ENST00000478582 PGPEP1Q9NXJ5 209 aa17.67■□□□□ 0.42
CCM2-211ENST00000478582 LINC00959A0A1B0GUT2 108 aa17.66■□□□□ 0.42
CCM2-211ENST00000478582 CDK2AP2O75956 126 aa17.66■□□□□ 0.42
CCM2-211ENST00000478582 G0S2P27469 103 aa17.66■□□□□ 0.42
CCM2-211ENST00000478582 Q8N814 137 aa17.66■□□□□ 0.42
CCM2-211ENST00000478582 FAM104AQ969W3 186 aa17.66■□□□□ 0.42
CCM2-211ENST00000478582 CYSLTR1Q9Y271 337 aa17.66■□□□□ 0.42
CCM2-211ENST00000478582 LRP1BQ9NZR2 4599 aa17.65■□□□□ 0.42
CCM2-211ENST00000478582 C2orf66Q6UXQ4 117 aa17.65■□□□□ 0.42
CCM2-211ENST00000478582 Q6ZUT4 128 aa17.65■□□□□ 0.42
CCM2-211ENST00000478582 COLCA2A8K830 154 aa17.64■□□□□ 0.41
CCM2-211ENST00000478582 C18orf32Q8TCD1 76 aa17.64■□□□□ 0.41
CCM2-211ENST00000478582 CCL25O15444 150 aa17.63■□□□□ 0.41
CCM2-211ENST00000478582 CDPF1Q6NVV7 123 aa17.63■□□□□ 0.41
CCM2-211ENST00000478582 CHCHD10Q8WYQ3 142 aaPredicted RBP17.63■□□□□ 0.41
CCM2-211ENST00000478582 RYR1P21817 5038 aa17.63■□□□□ 0.41
CCM2-211ENST00000478582 LECT2O14960 151 aa17.62■□□□□ 0.41
CCM2-211ENST00000478582 SS18Q15532 418 aa17.61■□□□□ 0.41
CCM2-211ENST00000478582 FA2HQ7L5A8 372 aa17.61■□□□□ 0.41
CCM2-211ENST00000478582 NTN5Q8WTR8 489 aaPredicted RBP17.61■□□□□ 0.41
CCM2-211ENST00000478582 GAGE12HA6NDE8 117 aa17.6■□□□□ 0.41
CCM2-211ENST00000478582 NPSP0C0P6 89 aa17.6■□□□□ 0.41
CCM2-211ENST00000478582 RNASE13Q5GAN3 156 aaKnown RBP17.6■□□□□ 0.41
CCM2-211ENST00000478582 OPRPNQ99935 248 aaPredicted RBP17.6■□□□□ 0.41
CCM2-211ENST00000478582 C14orf177Q52M58 125 aa17.59■□□□□ 0.41
CCM2-211ENST00000478582 TOMM6Q96B49 74 aa17.59■□□□□ 0.41
CCM2-211ENST00000478582 IGLV4-3A0A075B6K6 122 aa17.58■□□□□ 0.4
CCM2-211ENST00000478582 LINC01549A6NIU2 74 aa17.58■□□□□ 0.4
CCM2-211ENST00000478582 IGIPA6NJ69 53 aa17.58■□□□□ 0.4
CCM2-211ENST00000478582 C1orf196B1AJZ1 125 aa17.58■□□□□ 0.4
CCM2-211ENST00000478582 USP17L23D6RBM5 183 aa17.58■□□□□ 0.4
CCM2-211ENST00000478582 SCO1O75880 301 aa17.58■□□□□ 0.4
CCM2-211ENST00000478582 URB1-AS1Q96HZ7 61 aa17.58■□□□□ 0.4
CCM2-211ENST00000478582 TRGC2P03986 189 aa17.57■□□□□ 0.4
CCM2-211ENST00000478582 FOXI1Q12951 378 aa17.57■□□□□ 0.4
CCM2-211ENST00000478582 AP5S1Q9NUS5 200 aa17.57■□□□□ 0.4
CCM2-211ENST00000478582 DNAH5Q8TE73 4624 aa17.56■□□□□ 0.4
CCM2-211ENST00000478582 LINC00614P0C842 121 aa17.56■□□□□ 0.4
CCM2-211ENST00000478582 FUSP35637 526 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCM2-211ENST00000478582 CD164L2Q6UWJ8 174 aa17.56■□□□□ 0.4
CCM2-211ENST00000478582 TMEM141Q96I45 108 aa17.56■□□□□ 0.4
CCM2-211ENST00000478582 XCL1P47992 114 aa17.55■□□□□ 0.4
CCM2-211ENST00000478582 RAB5BP61020 215 aa17.55■□□□□ 0.4
CCM2-211ENST00000478582 HSPG2P98160 4391 aa17.54■□□□□ 0.4
CCM2-211ENST00000478582 TRAV13-1A0A0B4J241 112 aa17.54■□□□□ 0.4
CCM2-211ENST00000478582 TIMM17AQ99595 171 aa17.54■□□□□ 0.4
CCM2-211ENST00000478582 S100A1P23297 94 aa17.53■□□□□ 0.4
CCM2-211ENST00000478582 PCLOQ9Y6V0 5065 aa17.52■□□□□ 0.4
CCM2-211ENST00000478582 IGLV5-52A0A0A0MRZ9 124 aa17.52■□□□□ 0.4
CCM2-211ENST00000478582 ERASQ7Z444 233 aa17.52■□□□□ 0.4
CCM2-211ENST00000478582 AMELXQ99217 191 aa17.52■□□□□ 0.4
CCM2-211ENST00000478582 IFITM10A6NMD0 228 aa17.51■□□□□ 0.39
CCM2-211ENST00000478582 CFAP161Q6P656 301 aa17.51■□□□□ 0.39
CCM2-211ENST00000478582 Q6ZN92 141 aa17.51■□□□□ 0.39
CCM2-211ENST00000478582 TEX43Q6ZNM6 134 aa17.51■□□□□ 0.39
CCM2-211ENST00000478582 PRSS1P07477 247 aa17.5■□□□□ 0.39
CCM2-211ENST00000478582 PAPPA-AS1Q5QFB9 102 aa17.5■□□□□ 0.39
CCM2-211ENST00000478582 SCGB3A1Q96QR1 104 aa17.5■□□□□ 0.39
CCM2-211ENST00000478582 APOBP04114 4563 aaKnown RBP17.49■□□□□ 0.39
CCM2-211ENST00000478582 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.49■□□□□ 0.39
CCM2-211ENST00000478582 LINC00173Q6ZV60 143 aa17.49■□□□□ 0.39
CCM2-211ENST00000478582 VCX2Q9H322 139 aa17.49■□□□□ 0.39
CCM2-211ENST00000478582 A0A096LNJ9 63 aa17.48■□□□□ 0.39
CCM2-211ENST00000478582 C15orf56Q8N910 161 aa17.48■□□□□ 0.39
CCM2-211ENST00000478582 ATP6V1G1O75348 118 aa17.47■□□□□ 0.39
CCM2-211ENST00000478582 CHCHD1Q96BP2 118 aaKnown RBP17.47■□□□□ 0.39
CCM2-211ENST00000478582 C2orf88Q9BSF0 95 aa17.47■□□□□ 0.39
CCM2-211ENST00000478582 KRTAP4-5Q9BYR2 181 aa17.47■□□□□ 0.39
CCM2-211ENST00000478582 GCSHP23434 173 aa17.46■□□□□ 0.39
CCM2-211ENST00000478582 UBE2D1P51668 147 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms