RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 OR5A1Q8NGJ0 315 aa11.76□□□□□ -0.53
SMIM4-202ENST00000476842 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
SMIM4-202ENST00000476842 CSDC2Q9Y534 153 aaKnown RBP11.76□□□□□ -0.53
SMIM4-202ENST00000476842 LRP1BQ9NZR2 4599 aa11.75□□□□□ -0.53
SMIM4-202ENST00000476842 TGIF2-C20orf24A0A0A6YYL0 155 aa11.75□□□□□ -0.53
SMIM4-202ENST00000476842 RAB5AP20339 215 aa11.75□□□□□ -0.53
SMIM4-202ENST00000476842 CDPF1Q6NVV7 123 aa11.75□□□□□ -0.53
SMIM4-202ENST00000476842 UBE2D4Q9Y2X8 147 aa11.75□□□□□ -0.53
SMIM4-202ENST00000476842 IGLV10-54A0A075B6I4 117 aa11.74□□□□□ -0.53
SMIM4-202ENST00000476842 LECT2O14960 151 aa11.74□□□□□ -0.53
SMIM4-202ENST00000476842 DGAT2L7PQ6IED9 249 aa11.74□□□□□ -0.53
SMIM4-202ENST00000476842 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
SMIM4-202ENST00000476842 Q8N8P6 123 aa11.74□□□□□ -0.53
SMIM4-202ENST00000476842 NTN5Q8WTR8 489 aaPredicted RBP11.74□□□□□ -0.53
SMIM4-202ENST00000476842 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
SMIM4-202ENST00000476842 MRPL18Q9H0U6 180 aaKnown RBP11.73□□□□□ -0.53
SMIM4-202ENST00000476842 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
SMIM4-202ENST00000476842 FUSP35637 526 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMIM4-202ENST00000476842 FABP9Q0Z7S8 132 aa11.72□□□□□ -0.53
SMIM4-202ENST00000476842 ALKBH7Q9BT30 221 aaPredicted RBP11.72□□□□□ -0.53
SMIM4-202ENST00000476842 NXT2Q9NPJ8 142 aaKnown RBP11.72□□□□□ -0.53
SMIM4-202ENST00000476842 K7EMI3 77 aa11.71□□□□□ -0.53
SMIM4-202ENST00000476842 RPL39P62891 51 aaKnown RBP11.71□□□□□ -0.53
SMIM4-202ENST00000476842 YPEL4Q96NS1 127 aa11.71□□□□□ -0.53
SMIM4-202ENST00000476842 SPANXA1Q9NS26 97 aa11.7□□□□□ -0.54
SMIM4-202ENST00000476842 LINC00959A0A1B0GUT2 108 aa11.69□□□□□ -0.54
SMIM4-202ENST00000476842 IFI27P40305 119 aaPredicted RBP11.69□□□□□ -0.54
SMIM4-202ENST00000476842 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
SMIM4-202ENST00000476842 ORMDL2Q53FV1 153 aa11.69□□□□□ -0.54
SMIM4-202ENST00000476842 CHCHD10Q8WYQ3 142 aaPredicted RBP11.69□□□□□ -0.54
SMIM4-202ENST00000476842 TRAPPC1Q9Y5R8 145 aa11.69□□□□□ -0.54
SMIM4-202ENST00000476842 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
SMIM4-202ENST00000476842 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
SMIM4-202ENST00000476842 USP17L23D6RBM5 183 aa11.68□□□□□ -0.54
SMIM4-202ENST00000476842 SMCO4Q9NRQ5 59 aa11.68□□□□□ -0.54
SMIM4-202ENST00000476842 CCL25O15444 150 aa11.67□□□□□ -0.54
SMIM4-202ENST00000476842 GCSHP23434 173 aa11.67□□□□□ -0.54
SMIM4-202ENST00000476842 MRPS36P82909 103 aaKnown RBP11.67□□□□□ -0.54
SMIM4-202ENST00000476842 SS18Q15532 418 aa11.67□□□□□ -0.54
SMIM4-202ENST00000476842 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
SMIM4-202ENST00000476842 PYGO1Q9Y3Y4 419 aa11.67□□□□□ -0.54
SMIM4-202ENST00000476842 Q6ZUT4 128 aa11.66□□□□□ -0.54
SMIM4-202ENST00000476842 PRSS3P2Q8NHM4 247 aa11.66□□□□□ -0.54
SMIM4-202ENST00000476842 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.54
SMIM4-202ENST00000476842 CBLN2Q8IUK8 224 aa11.65□□□□□ -0.54
SMIM4-202ENST00000476842 LINC01546A6NGU7 62 aa11.64□□□□□ -0.55
SMIM4-202ENST00000476842 C1orf196B1AJZ1 125 aa11.64□□□□□ -0.55
SMIM4-202ENST00000476842 PRSS1P07477 247 aa11.64□□□□□ -0.55
SMIM4-202ENST00000476842 G0S2P27469 103 aa11.64□□□□□ -0.55
SMIM4-202ENST00000476842 FOXI1Q12951 378 aa11.64□□□□□ -0.55
SMIM4-202ENST00000476842 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
SMIM4-202ENST00000476842 C2orf66Q6UXQ4 117 aa11.64□□□□□ -0.55
SMIM4-202ENST00000476842 OPRPNQ99935 248 aaPredicted RBP11.64□□□□□ -0.55
SMIM4-202ENST00000476842 CYSLTR1Q9Y271 337 aa11.64□□□□□ -0.55
SMIM4-202ENST00000476842 XCL1P47992 114 aa11.63□□□□□ -0.55
SMIM4-202ENST00000476842 KRTAP10-1P60331 282 aa11.63□□□□□ -0.55
SMIM4-202ENST00000476842 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
SMIM4-202ENST00000476842 CD164L2Q6UWJ8 174 aa11.63□□□□□ -0.55
SMIM4-202ENST00000476842 CDK2AP2O75956 126 aa11.62□□□□□ -0.55
SMIM4-202ENST00000476842 APOBP04114 4563 aaKnown RBP11.62□□□□□ -0.55
SMIM4-202ENST00000476842 KIAA1109Q2LD37 5005 aa11.62□□□□□ -0.55
SMIM4-202ENST00000476842 IGLV4-3A0A075B6K6 122 aa11.61□□□□□ -0.55
SMIM4-202ENST00000476842 TRAV13-1A0A0B4J241 112 aa11.61□□□□□ -0.55
SMIM4-202ENST00000476842 NPSP0C0P6 89 aa11.61□□□□□ -0.55
SMIM4-202ENST00000476842 TOMM6Q96B49 74 aa11.6□□□□□ -0.55
SMIM4-202ENST00000476842 DNAH8Q96JB1 4490 aa11.59□□□□□ -0.55
SMIM4-202ENST00000476842 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
SMIM4-202ENST00000476842 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
SMIM4-202ENST00000476842 C15orf56Q8N910 161 aa11.59□□□□□ -0.55
SMIM4-202ENST00000476842 C18orf32Q8TCD1 76 aa11.59□□□□□ -0.55
SMIM4-202ENST00000476842 TMEM141Q96I45 108 aa11.59□□□□□ -0.55
SMIM4-202ENST00000476842 HERC2O95714 4834 aa11.59□□□□□ -0.55
SMIM4-202ENST00000476842 RYR1P21817 5038 aa11.58□□□□□ -0.56
SMIM4-202ENST00000476842 hDV102S1A0JD36 115 aa11.58□□□□□ -0.56
SMIM4-202ENST00000476842 LINC01549A6NIU2 74 aa11.58□□□□□ -0.56
SMIM4-202ENST00000476842 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
SMIM4-202ENST00000476842 IGHV1-58A0A0C4DH39 117 aa11.56□□□□□ -0.56
SMIM4-202ENST00000476842 LINC00614P0C842 121 aa11.56□□□□□ -0.56
SMIM4-202ENST00000476842 CNBPP62633 177 aaKnown RBP11.56□□□□□ -0.56
SMIM4-202ENST00000476842 Q6ZN92 141 aa11.56□□□□□ -0.56
SMIM4-202ENST00000476842 ERASQ7Z444 233 aa11.56□□□□□ -0.56
SMIM4-202ENST00000476842 AMELXQ99217 191 aa11.56□□□□□ -0.56
SMIM4-202ENST00000476842 TIMM17AQ99595 171 aa11.56□□□□□ -0.56
SMIM4-202ENST00000476842 VCX2Q9H322 139 aa11.56□□□□□ -0.56
SMIM4-202ENST00000476842 AP5S1Q9NUS5 200 aa11.56□□□□□ -0.56
SMIM4-202ENST00000476842 GVQW2A0A096LPI5 108 aaPredicted RBP11.55□□□□□ -0.56
SMIM4-202ENST00000476842 COX7A2LO14548 114 aa11.55□□□□□ -0.56
SMIM4-202ENST00000476842 LINC01620Q4KN68 170 aa11.55□□□□□ -0.56
SMIM4-202ENST00000476842 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
SMIM4-202ENST00000476842 C9orf163Q8N9P6 203 aa11.55□□□□□ -0.56
SMIM4-202ENST00000476842 URB1-AS1Q96HZ7 61 aa11.55□□□□□ -0.56
SMIM4-202ENST00000476842 HSPG2P98160 4391 aa11.55□□□□□ -0.56
SMIM4-202ENST00000476842 COLCA2A8K830 154 aa11.54□□□□□ -0.56
SMIM4-202ENST00000476842 SLPIP03973 132 aa11.54□□□□□ -0.56
SMIM4-202ENST00000476842 XGP55808 180 aa11.54□□□□□ -0.56
SMIM4-202ENST00000476842 RAB5BP61020 215 aa11.54□□□□□ -0.56
SMIM4-202ENST00000476842 PAPPA-AS1Q5QFB9 102 aa11.54□□□□□ -0.56
SMIM4-202ENST00000476842 SCGB3A1Q96QR1 104 aa11.54□□□□□ -0.56
SMIM4-202ENST00000476842 IGHV3OR16-9A0A0B4J2B5 98 aa11.53□□□□□ -0.56
SMIM4-202ENST00000476842 MALP21145 153 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms