RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 IGHV1OR15-1A0A075B7D0 117 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 LOC110117498A0A087WWA1 95 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 IGKV3-15P01624 115 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 MSMBP08118 114 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 LINC01547P58512 204 aaPredicted RBP2.66□□□□□ -1.98
LSM2-211ENST00000475835 C17orf58Q2M2W7 97 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 Q8N3U1 123 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 Q8N9P0 234 aaPredicted RBP2.66□□□□□ -1.98
LSM2-211ENST00000475835 SPANXA2-OT1Q8N9U9 137 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 FAM218AQ96MZ4 157 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 PRR15LQ9BU68 103 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 OCR1Q9BZK8 76 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 NDUFA4L2Q9NRX3 87 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 ORMDL1Q9P0S3 153 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 CEP350Q5VT06 3117 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 MED13Q9UHV7 2174 aa2.66□□□□□ -1.98
LSM2-211ENST00000475835 TRANK1O15050 2925 aa2.65□□□□□ -1.98
LSM2-211ENST00000475835 CEP290O15078 2479 aa2.65□□□□□ -1.98
LSM2-211ENST00000475835 IGKV1OR2-108A0A075B7D4 117 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 TRAV12-3A0A0B4J271 114 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 IGHV1-18A0A0C4DH31 117 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 TRBV6-5A0A0K0K1A5 114 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 BPY2O14599 106 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 IGLV1-44P01699 117 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 IGHV3-48P01763 117 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 TMEM105Q8N8V8 129 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 DEFB108BQ8NET1 73 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 TMEM167AQ8TBQ9 72 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 LINC00167Q96N53 147 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 GAFA1Q96PS6 74 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 S4R3C0 116 aa2.65□□□□□ -1.99
LSM2-211ENST00000475835 CENPFP49454 3210 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 CR1P17927 2039 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 TRAV10A0A0B4J240 114 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 TRAV21A0A0B4J279 112 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 IGHV3-35A0A0C4DH35 117 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 CGB3P0DN86 165 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 CGB7P0DN87 165 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 LYZP61626 148 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 C10orf55Q5SWW7 151 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 ZCCHC13Q8WW36 166 aaKnown RBP2.64□□□□□ -1.99
LSM2-211ENST00000475835 ZNF625Q96I27 306 aaPredicted RBP2.64□□□□□ -1.99
LSM2-211ENST00000475835 SND1-IT1Q9HBX3 110 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 LENEPQ9Y5L5 61 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 MALRD1Q5VYJ5 2156 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 CACNA1GO43497 2377 aa2.64□□□□□ -1.99
LSM2-211ENST00000475835 CHD9Q3L8U1 2897 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 IGHV7-81A0A0B4J1V7 117 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 A8MU10 97 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 KRTAP16-1A8MUX0 517 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 K7EQD1 137 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 NDUFA1O15239 70 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 IGHV1-46P01743 117 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 CRPP02741 224 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 IGHV3-30-3P0DP02 117 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 ROMO1P60602 79 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 C9orf66Q5T8R8 295 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 C1orf229Q6ZS94 237 aaPredicted RBP2.63□□□□□ -1.99
LSM2-211ENST00000475835 LINC00528Q8N1L1 170 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 ZFAND2AQ8N6M9 145 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 C20orf203Q8NBC4 194 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 LINC00476Q8WZB0 136 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 RPL36ALQ969Q0 106 aaKnown RBP2.63□□□□□ -1.99
LSM2-211ENST00000475835 LINC00208Q96KT6 92 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 ZNRD1Q9P1U0 126 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 C11orf21Q9P2W6 132 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 KLK9Q9UKQ9 250 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 NAV3Q8IVL0 2385 aa2.63□□□□□ -1.99
LSM2-211ENST00000475835 TNCP24821 2201 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 CHD7Q9P2D1 2997 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 IGKV1D-37A0A075B6S9 117 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 IGHV3-21A0A0B4J1V1 117 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 H3BPC8 53 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 RTL8CO15255 209 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 CCL3L1P16619 93 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 COX7A1P24310 79 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 CRIP1P50238 77 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 REG3AQ06141 175 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 WT1-ASQ06250 92 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 HCP5Q6MZN7 132 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 MIR7-3HGQ8N6C7 128 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 LINC00308Q8TCZ7 52 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 PLAC8Q9NZF1 115 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 LINC01558Q9Y6Z2 57 aa2.62□□□□□ -1.99
LSM2-211ENST00000475835 TECTAO75443 2155 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 IGHV3-73A0A0B4J1V6 119 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 IGHV4-28A0A0C4DH34 117 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 IGHV4-61A0A0C4DH41 118 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 TRBV10-1A0A0K0K1A3 114 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 A0A1W2PNU3 283 aaPredicted RBP2.61□□□□□ -1.99
LSM2-211ENST00000475835 B4DSR2 109 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 H3BRN7 92 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 IGLV2-23P01705 113 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 IGHV4-59P01825 116 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 CHTF8P0CG12 524 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 APELAP0DMC3 54 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 IGHV4-30-4P0DP06 118 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 PRB4P10163 310 aaPredicted RBP2.61□□□□□ -1.99
LSM2-211ENST00000475835 DSCR9P59020 149 aa2.61□□□□□ -1.99
LSM2-211ENST00000475835 C1orf134Q5TEV5 83 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 317 ms