RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 Q8N8P6 123 aa8.51□□□□□ -1.05
COL18A1-206ENST00000459895 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
COL18A1-206ENST00000459895 TM2D2Q9BX73 214 aa8.51□□□□□ -1.05
COL18A1-206ENST00000459895 FUSP35637 526 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL18A1-206ENST00000459895 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
COL18A1-206ENST00000459895 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
COL18A1-206ENST00000459895 KRTAP26-1Q6PEX3 210 aa8.5□□□□□ -1.05
COL18A1-206ENST00000459895 TMEM101Q96IK0 257 aa8.5□□□□□ -1.05
COL18A1-206ENST00000459895 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
COL18A1-206ENST00000459895 TRAPPC1Q9Y5R8 145 aa8.5□□□□□ -1.05
COL18A1-206ENST00000459895 SCO1O75880 301 aa8.49□□□□□ -1.05
COL18A1-206ENST00000459895 RAB5AP20339 215 aa8.49□□□□□ -1.05
COL18A1-206ENST00000459895 IFI27P40305 119 aaPredicted RBP8.49□□□□□ -1.05
COL18A1-206ENST00000459895 SPATA12Q7Z6I5 190 aa8.49□□□□□ -1.05
COL18A1-206ENST00000459895 BAALCQ8WXS3 180 aa8.48□□□□□ -1.05
COL18A1-206ENST00000459895 COX11Q9Y6N1 276 aa8.48□□□□□ -1.05
COL18A1-206ENST00000459895 Q8N814 137 aa8.47□□□□□ -1.05
COL18A1-206ENST00000459895 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
COL18A1-206ENST00000459895 TMEM18Q96B42 140 aa8.47□□□□□ -1.05
COL18A1-206ENST00000459895 TIMM21Q9BVV7 248 aa8.47□□□□□ -1.05
COL18A1-206ENST00000459895 CDC42SE2Q9NRR3 84 aa8.47□□□□□ -1.05
COL18A1-206ENST00000459895 SPANXA1Q9NS26 97 aa8.47□□□□□ -1.05
COL18A1-206ENST00000459895 ORMDL2Q53FV1 153 aa8.46□□□□□ -1.06
COL18A1-206ENST00000459895 C2orf66Q6UXQ4 117 aa8.46□□□□□ -1.06
COL18A1-206ENST00000459895 ZNF664Q8N3J9 261 aa8.46□□□□□ -1.06
COL18A1-206ENST00000459895 C18orf32Q8TCD1 76 aa8.46□□□□□ -1.06
COL18A1-206ENST00000459895 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.06
COL18A1-206ENST00000459895 LRP1BQ9NZR2 4599 aa8.46□□□□□ -1.06
COL18A1-206ENST00000459895 TRAV8-4A0A0B4J246 113 aa8.45□□□□□ -1.06
COL18A1-206ENST00000459895 K7EMI3 77 aa8.45□□□□□ -1.06
COL18A1-206ENST00000459895 EREGO14944 169 aa8.45□□□□□ -1.06
COL18A1-206ENST00000459895 SMAGPQ0VAQ4 97 aa8.45□□□□□ -1.06
COL18A1-206ENST00000459895 DGAT2L7PQ6IED9 249 aa8.45□□□□□ -1.06
COL18A1-206ENST00000459895 CHCHD10Q8WYQ3 142 aaPredicted RBP8.45□□□□□ -1.06
COL18A1-206ENST00000459895 OPRPNQ99935 248 aaPredicted RBP8.45□□□□□ -1.06
COL18A1-206ENST00000459895 CYSLTR1Q9Y271 337 aa8.45□□□□□ -1.06
COL18A1-206ENST00000459895 IGLV4-3A0A075B6K6 122 aa8.44□□□□□ -1.06
COL18A1-206ENST00000459895 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
COL18A1-206ENST00000459895 GAGE12HA6NDE8 117 aa8.44□□□□□ -1.06
COL18A1-206ENST00000459895 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
COL18A1-206ENST00000459895 C16orf90A8MZG2 172 aa8.44□□□□□ -1.06
COL18A1-206ENST00000459895 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
COL18A1-206ENST00000459895 PRSS3P2Q8NHM4 247 aa8.44□□□□□ -1.06
COL18A1-206ENST00000459895 URB1-AS1Q96HZ7 61 aa8.44□□□□□ -1.06
COL18A1-206ENST00000459895 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.43□□□□□ -1.06
COL18A1-206ENST00000459895 COLCA2A8K830 154 aa8.43□□□□□ -1.06
COL18A1-206ENST00000459895 CCL25O15444 150 aa8.43□□□□□ -1.06
COL18A1-206ENST00000459895 ATP6V1G1O75348 118 aa8.43□□□□□ -1.06
COL18A1-206ENST00000459895 XCL1P47992 114 aa8.43□□□□□ -1.06
COL18A1-206ENST00000459895 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
COL18A1-206ENST00000459895 FA2HQ7L5A8 372 aa8.43□□□□□ -1.06
COL18A1-206ENST00000459895 FOXI1Q12951 378 aa8.42□□□□□ -1.06
COL18A1-206ENST00000459895 CDPF1Q6NVV7 123 aa8.42□□□□□ -1.06
COL18A1-206ENST00000459895 PYGO1Q9Y3Y4 419 aa8.42□□□□□ -1.06
COL18A1-206ENST00000459895 APOBP04114 4563 aaKnown RBP8.42□□□□□ -1.06
COL18A1-206ENST00000459895 A0A096LNJ9 63 aa8.41□□□□□ -1.06
COL18A1-206ENST00000459895 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
COL18A1-206ENST00000459895 IFITM10A6NMD0 228 aa8.41□□□□□ -1.06
COL18A1-206ENST00000459895 TRGC2P03986 189 aa8.41□□□□□ -1.06
COL18A1-206ENST00000459895 LINC00173Q6ZV60 143 aa8.41□□□□□ -1.06
COL18A1-206ENST00000459895 C15orf56Q8N910 161 aa8.41□□□□□ -1.06
COL18A1-206ENST00000459895 TOMM6Q96B49 74 aa8.41□□□□□ -1.06
COL18A1-206ENST00000459895 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
COL18A1-206ENST00000459895 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
COL18A1-206ENST00000459895 IGIPA6NJ69 53 aa8.4□□□□□ -1.06
COL18A1-206ENST00000459895 SS18Q15532 418 aa8.4□□□□□ -1.06
COL18A1-206ENST00000459895 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.06
COL18A1-206ENST00000459895 NTN5Q8WTR8 489 aaPredicted RBP8.4□□□□□ -1.06
COL18A1-206ENST00000459895 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.06
COL18A1-206ENST00000459895 KIAA1109Q2LD37 5005 aa8.4□□□□□ -1.06
COL18A1-206ENST00000459895 RYR1P21817 5038 aa8.39□□□□□ -1.07
COL18A1-206ENST00000459895 PRSS1P07477 247 aa8.39□□□□□ -1.07
COL18A1-206ENST00000459895 PMCHL1Q16048 86 aa8.39□□□□□ -1.07
COL18A1-206ENST00000459895 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
COL18A1-206ENST00000459895 C14orf177Q52M58 125 aa8.38□□□□□ -1.07
COL18A1-206ENST00000459895 CD164L2Q6UWJ8 174 aa8.38□□□□□ -1.07
COL18A1-206ENST00000459895 Q6ZN92 141 aa8.38□□□□□ -1.07
COL18A1-206ENST00000459895 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
COL18A1-206ENST00000459895 HERC2O95714 4834 aa8.37□□□□□ -1.07
COL18A1-206ENST00000459895 C1orf196B1AJZ1 125 aa8.37□□□□□ -1.07
COL18A1-206ENST00000459895 NPSP0C0P6 89 aa8.37□□□□□ -1.07
COL18A1-206ENST00000459895 HIGD2BQ4VC39 106 aa8.37□□□□□ -1.07
COL18A1-206ENST00000459895 AMELXQ99217 191 aa8.37□□□□□ -1.07
COL18A1-206ENST00000459895 PGPEP1Q9NXJ5 209 aa8.37□□□□□ -1.07
COL18A1-206ENST00000459895 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 HBDP02042 147 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 LINC00614P0C842 121 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 UBE2D1P51668 147 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 LINC00310P59036 64 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 LINC01620Q4KN68 170 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 ERASQ7Z444 233 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 C2orf88Q9BSF0 95 aa8.36□□□□□ -1.07
COL18A1-206ENST00000459895 GVQW2A0A096LPI5 108 aaPredicted RBP8.35□□□□□ -1.07
COL18A1-206ENST00000459895 G0S2P27469 103 aa8.35□□□□□ -1.07
COL18A1-206ENST00000459895 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
COL18A1-206ENST00000459895 HSPG2P98160 4391 aa8.34□□□□□ -1.07
COL18A1-206ENST00000459895 COX7A2LO14548 114 aa8.34□□□□□ -1.07
COL18A1-206ENST00000459895 S100A1P23297 94 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms