RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 MSMBP08118 114 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 COX7CP15954 63 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 HIST2H2BCQ6DN03 193 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 HIST2H2BDQ6DRA6 164 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 ZFHX2Q9C0A1 2572 aaPredicted RBP9.88□□□□□ -0.83
PTPRE-204ENST00000455661 ABCA2Q9BZC7 2435 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 PF4P02776 101 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 MALP21145 153 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 HOXD3P31249 432 aaPredicted RBP9.88□□□□□ -0.83
PTPRE-204ENST00000455661 FAM19A3Q7Z5A8 133 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 C10orf105Q8TEF2 133 aa9.88□□□□□ -0.83
PTPRE-204ENST00000455661 NACAE9PAV3 2078 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 RS1O15537 224 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 NBL1P41271 181 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 FAM218AQ96MZ4 157 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 NBASA2RRP1 2371 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 TRAV13-1A0A0B4J241 112 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 A8MTW9 85 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 NRGNQ92686 78 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 OVOL2Q9BRP0 275 aa9.87□□□□□ -0.83
PTPRE-204ENST00000455661 ATOX1O00244 68 aa9.86□□□□□ -0.83
PTPRE-204ENST00000455661 C22orf24Q9Y442 160 aa9.86□□□□□ -0.83
PTPRE-204ENST00000455661 RBMY1BA6NDE4 496 aaKnown RBP9.85□□□□□ -0.83
PTPRE-204ENST00000455661 RBMY1EA6NEQ0 496 aaKnown RBP9.85□□□□□ -0.83
PTPRE-204ENST00000455661 RBMY1DP0C7P1 496 aaKnown RBP9.85□□□□□ -0.83
PTPRE-204ENST00000455661 SPTAN1Q13813 2472 aaKnown RBP9.85□□□□□ -0.83
PTPRE-204ENST00000455661 DNAL4O96015 105 aa9.85□□□□□ -0.83
PTPRE-204ENST00000455661 IGHV4-59P01825 116 aa9.85□□□□□ -0.83
PTPRE-204ENST00000455661 CRPP02741 224 aa9.85□□□□□ -0.83
PTPRE-204ENST00000455661 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
PTPRE-204ENST00000455661 C11orf72Q8NBR9 251 aa9.85□□□□□ -0.83
PTPRE-204ENST00000455661 Q9HAA7 133 aa9.85□□□□□ -0.83
PTPRE-204ENST00000455661 CSDC2Q9Y534 153 aaKnown RBP9.85□□□□□ -0.83
PTPRE-204ENST00000455661 SORL1Q92673 2214 aa9.84□□□□□ -0.83
PTPRE-204ENST00000455661 J3KT08 172 aa9.84□□□□□ -0.83
PTPRE-204ENST00000455661 LRRC75A-AS1Q8N1F1 130 aa9.84□□□□□ -0.83
PTPRE-204ENST00000455661 CCL19Q99731 98 aa9.84□□□□□ -0.83
PTPRE-204ENST00000455661 AKAP6Q13023 2319 aa9.84□□□□□ -0.83
PTPRE-204ENST00000455661 C19orf84I3L1E1 186 aa9.83□□□□□ -0.84
PTPRE-204ENST00000455661 CRYGAP11844 174 aa9.83□□□□□ -0.84
PTPRE-204ENST00000455661 UBE2E2Q96LR5 201 aa9.83□□□□□ -0.84
PTPRE-204ENST00000455661 AVPP01185 164 aa9.83□□□□□ -0.84
PTPRE-204ENST00000455661 INSP01308 110 aa9.83□□□□□ -0.84
PTPRE-204ENST00000455661 IGHV4-30-2A0A087WSY4 118 aa9.82□□□□□ -0.84
PTPRE-204ENST00000455661 A0A1B0GX51 115 aa9.82□□□□□ -0.84
PTPRE-204ENST00000455661 F5H768 121 aa9.82□□□□□ -0.84
PTPRE-204ENST00000455661 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
PTPRE-204ENST00000455661 RPL36AP83881 106 aaKnown RBP9.82□□□□□ -0.84
PTPRE-204ENST00000455661 DEFB112Q30KQ8 113 aa9.82□□□□□ -0.84
PTPRE-204ENST00000455661 RPL36ALQ969Q0 106 aaKnown RBP9.82□□□□□ -0.84
PTPRE-204ENST00000455661 C2orf48Q96LS8 159 aa9.82□□□□□ -0.84
PTPRE-204ENST00000455661 B4DSR2 109 aa9.81□□□□□ -0.84
PTPRE-204ENST00000455661 ATP5J2P56134 94 aa9.81□□□□□ -0.84
PTPRE-204ENST00000455661 CDC42SE2Q9NRR3 84 aa9.81□□□□□ -0.84
PTPRE-204ENST00000455661 KLK5Q9Y337 293 aaPredicted RBP9.81□□□□□ -0.84
PTPRE-204ENST00000455661 LOC107984640A0A0U1RRK4 108 aa9.8□□□□□ -0.84
PTPRE-204ENST00000455661 H0YGX0 51 aa9.79□□□□□ -0.84
PTPRE-204ENST00000455661 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
PTPRE-204ENST00000455661 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
PTPRE-204ENST00000455661 TRBV10-1A0A0K0K1A3 114 aa9.79□□□□□ -0.84
PTPRE-204ENST00000455661 SLURP1P55000 103 aa9.79□□□□□ -0.84
PTPRE-204ENST00000455661 MAP6D1Q9H9H5 199 aa9.79□□□□□ -0.84
PTPRE-204ENST00000455661 UBE2L6O14933 153 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 LINC00337Q8N6G1 96 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 C14orf132Q9NPU4 83 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 CELSR1Q9NYQ6 3014 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 TRGV1A0A0A0MS02 117 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 K7EQD1 137 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 RPS28P62857 69 aaKnown RBP9.78□□□□□ -0.84
PTPRE-204ENST00000455661 Q6JHZ5 121 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
PTPRE-204ENST00000455661 hADV29S1A0JD25 119 aa9.77□□□□□ -0.85
PTPRE-204ENST00000455661 SMIM11BQ8TCY0 68 aa9.77□□□□□ -0.85
PTPRE-204ENST00000455661 COX7B2Q8TF08 81 aa9.77□□□□□ -0.85
PTPRE-204ENST00000455661 A0A087WYN8 130 aa9.77□□□□□ -0.85
PTPRE-204ENST00000455661 IGKV2-28A0A075B6P5 120 aa9.76□□□□□ -0.85
PTPRE-204ENST00000455661 IGKV2D-28P01615 120 aa9.76□□□□□ -0.85
PTPRE-204ENST00000455661 LINC00158P58513 81 aa9.76□□□□□ -0.85
PTPRE-204ENST00000455661 DYNLRB2Q8TF09 96 aa9.76□□□□□ -0.85
PTPRE-204ENST00000455661 Q96MF0 132 aa9.76□□□□□ -0.85
PTPRE-204ENST00000455661 IGKV3D-7A0A0C4DH55 119 aa9.76□□□□□ -0.85
PTPRE-204ENST00000455661 DEFB136Q30KP8 78 aa9.76□□□□□ -0.85
PTPRE-204ENST00000455661 CEP295Q9C0D2 2601 aa9.75□□□□□ -0.85
PTPRE-204ENST00000455661 FAM19A5Q7Z5A7 132 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-204ENST00000455661 TMEM243Q9BU79 118 aa9.75□□□□□ -0.85
PTPRE-204ENST00000455661 TOMM7Q9P0U1 55 aa9.75□□□□□ -0.85
PTPRE-204ENST00000455661 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
PTPRE-204ENST00000455661 HIVEP3Q5T1R4 2406 aa9.75□□□□□ -0.85
PTPRE-204ENST00000455661 C5orf47Q569G3 176 aa9.74□□□□□ -0.85
PTPRE-204ENST00000455661 SERP2Q8N6R1 65 aa9.74□□□□□ -0.85
PTPRE-204ENST00000455661 OBSCN-AS1Q96MR7 158 aa9.74□□□□□ -0.85
PTPRE-204ENST00000455661 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTPRE-204ENST00000455661 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
PTPRE-204ENST00000455661 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
PTPRE-204ENST00000455661 ZNF702PQ9H963 129 aa9.73□□□□□ -0.85
PTPRE-204ENST00000455661 TMEM258P61165 79 aa9.73□□□□□ -0.85
PTPRE-204ENST00000455661 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
PTPRE-204ENST00000455661 SMIM9A6NGZ8 99 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms