RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 PRO0461Q9UI25 63 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 IGHV1-24A0A0C4DH33 117 aa5.62□□□□□ -1.51
BRCC3-208ENST00000453705 SCGB1C2P0DMR2 95 aa5.62□□□□□ -1.51
BRCC3-208ENST00000453705 PSMG4Q5JS54 123 aa5.62□□□□□ -1.51
BRCC3-208ENST00000453705 SLC50A1Q9BRV3 221 aa5.62□□□□□ -1.51
BRCC3-208ENST00000453705 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.62□□□□□ -1.516e-8■■■■■ 27.8
BRCC3-208ENST00000453705 CLPSL1A2RUU4 121 aa5.62□□□□□ -1.51
BRCC3-208ENST00000453705 NDUFA4O00483 81 aa5.62□□□□□ -1.51
BRCC3-208ENST00000453705 IL4P05112 153 aa5.62□□□□□ -1.51
BRCC3-208ENST00000453705 IGHV4-38-2P0DP08 117 aa5.62□□□□□ -1.51
BRCC3-208ENST00000453705 HIGD1BQ9P298 99 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 RPL37AP8A6NKH3 93 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
BRCC3-208ENST00000453705 C15orf32Q32M92 178 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 NFE4Q86UQ8 179 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 CD24P25063 80 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 GDF5OSQ5U4N7 250 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 Q6YL49 198 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 LENEPQ9Y5L5 61 aa5.61□□□□□ -1.51
BRCC3-208ENST00000453705 IGHV3-48P01763 117 aa5.6□□□□□ -1.51
BRCC3-208ENST00000453705 Q6ZQT7 251 aa5.6□□□□□ -1.51
BRCC3-208ENST00000453705 RAB37Q96AX2 223 aa5.6□□□□□ -1.51
BRCC3-208ENST00000453705 RPP21Q9H633 154 aaKnown RBP5.6□□□□□ -1.51
BRCC3-208ENST00000453705 LINC00588Q9Y4M8 146 aa5.6□□□□□ -1.51
BRCC3-208ENST00000453705 SMAD5-AS1Q9Y6J3 95 aa5.6□□□□□ -1.51
BRCC3-208ENST00000453705 DAND5Q8N907 189 aa5.6□□□□□ -1.51
BRCC3-208ENST00000453705 NKAPP1Q8N9T2 125 aa5.6□□□□□ -1.51
BRCC3-208ENST00000453705 HIST1H4GQ99525 98 aa5.6□□□□□ -1.51
BRCC3-208ENST00000453705 C2CD3Q4AC94 2353 aa5.59□□□□□ -1.51
BRCC3-208ENST00000453705 SPG11Q96JI7 2443 aa5.59□□□□□ -1.51
BRCC3-208ENST00000453705 A8MWL6 223 aa5.59□□□□□ -1.51
BRCC3-208ENST00000453705 H3BUX3 64 aa5.59□□□□□ -1.51
BRCC3-208ENST00000453705 SPINK4O60575 86 aa5.59□□□□□ -1.51
BRCC3-208ENST00000453705 CSN1S1P47710 185 aa5.59□□□□□ -1.51
BRCC3-208ENST00000453705 LINC01554Q52M75 96 aa5.59□□□□□ -1.51
BRCC3-208ENST00000453705 IGHV3-21A0A0B4J1V1 117 aa5.59□□□□□ -1.52
BRCC3-208ENST00000453705 TRBV27A0A0K0K1C4 114 aa5.59□□□□□ -1.52
BRCC3-208ENST00000453705 hADV29S1A0JD25 119 aa5.59□□□□□ -1.52
BRCC3-208ENST00000453705 TWIST1Q15672 202 aa5.59□□□□□ -1.52
BRCC3-208ENST00000453705 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.59□□□□□ -1.52
BRCC3-208ENST00000453705 MAPK1IP1LQ8NDC0 245 aa5.59□□□□□ -1.52
BRCC3-208ENST00000453705 APELAP0DMC3 54 aa5.58□□□□□ -1.52
BRCC3-208ENST00000453705 ADAMTSL4-AS1Q5T5F5 129 aa5.58□□□□□ -1.52
BRCC3-208ENST00000453705 ADM2Q7Z4H4 148 aa5.58□□□□□ -1.52
BRCC3-208ENST00000453705 DPH3P1Q9H4G8 78 aa5.58□□□□□ -1.52
BRCC3-208ENST00000453705 LINC01548A6NM66 108 aa5.58□□□□□ -1.52
BRCC3-208ENST00000453705 G3V318 75 aa5.58□□□□□ -1.52
BRCC3-208ENST00000453705 SOCS3O14543 225 aa5.58□□□□□ -1.52
BRCC3-208ENST00000453705 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
BRCC3-208ENST00000453705 IGHV3OR16-10A0A075B7F0 116 aa5.57□□□□□ -1.52
BRCC3-208ENST00000453705 MGST1P10620 155 aaKnown RBP5.57□□□□□ -1.52
BRCC3-208ENST00000453705 SOSTDC1Q6X4U4 206 aa5.57□□□□□ -1.52
BRCC3-208ENST00000453705 BRD3OSQ6XYD6 125 aa5.57□□□□□ -1.52
BRCC3-208ENST00000453705 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
BRCC3-208ENST00000453705 CNFNQ9BYD5 112 aa5.57□□□□□ -1.52
BRCC3-208ENST00000453705 SLURP1P55000 103 aa5.57□□□□□ -1.52
BRCC3-208ENST00000453705 SYNJ2BPP57105 145 aa5.57□□□□□ -1.52
BRCC3-208ENST00000453705 DEFB112Q30KQ8 113 aa5.57□□□□□ -1.52
BRCC3-208ENST00000453705 TRGV3P03979 118 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 CXCL5P42830 114 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 LINC00479Q96M42 142 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 TRAV2A0A0B4J234 112 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 DNAJC9-AS1A6NH13 148 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 CHTF8P0CG12 524 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 COX7CP15954 63 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 S100A7L2Q5SY68 101 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 ODF3Q96PU9 254 aa5.56□□□□□ -1.52
BRCC3-208ENST00000453705 AKAP6Q13023 2319 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 NPC2P61916 151 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 LINC00322Q6ZN03 302 aaPredicted RBP5.55□□□□□ -1.52
BRCC3-208ENST00000453705 PHF5AQ7RTV0 110 aaKnown RBP5.55□□□□□ -1.52
BRCC3-208ENST00000453705 CYSTM1Q9H1C7 97 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 FBN2P35556 2912 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 WNK2Q9Y3S1 2297 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 FXYD2P54710 66 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 CFAP126Q5VTH2 177 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 PPDPFLQ8WWR9 84 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 NF1P21359 2839 aa5.55□□□□□ -1.52
BRCC3-208ENST00000453705 IGHV7-4-1A0A0J9YVY3 117 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 CD7P09564 240 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 UBE2BP63146 152 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 OTOGQ6ZRI0 2925 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 PDZD2O15018 2839 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 PRM2P04554 102 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 ASIPP42127 132 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 CRIP1P50238 77 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 C18orf65Q6ZTR6 163 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 U3KQK5 164 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 APCP25054 2843 aa5.54□□□□□ -1.52
BRCC3-208ENST00000453705 IGHV4-4A0A075B6R2 117 aa5.53□□□□□ -1.52
BRCC3-208ENST00000453705 A8MTW9 85 aa5.53□□□□□ -1.52
BRCC3-208ENST00000453705 HIGD1CA8MV81 97 aa5.53□□□□□ -1.52
BRCC3-208ENST00000453705 PRB4P10163 310 aaPredicted RBP5.53□□□□□ -1.52
BRCC3-208ENST00000453705 RNASE4P34096 147 aaKnown RBP5.53□□□□□ -1.52
BRCC3-208ENST00000453705 CEND1Q8N111 149 aa5.53□□□□□ -1.52
BRCC3-208ENST00000453705 LINC01546A6NGU7 62 aa5.53□□□□□ -1.52
BRCC3-208ENST00000453705 TIMM17BO60830 172 aa5.53□□□□□ -1.52
BRCC3-208ENST00000453705 CMC4P56277 68 aaPredicted RBP5.53□□□□□ -1.52
BRCC3-208ENST00000453705 NOTCH2NLQ7Z3S9 236 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms