RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CXorf51AA0A1B0GTR3 108 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 GYPAP02724 150 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 CCKP06307 115 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 LINC00299Q6ZSB3 139 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 SPTSSBQ8NFR3 76 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 PMCHL2Q9BQD1 86 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 LIMD2Q9BT23 127 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 PLXNA2O75051 1894 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 DOCK1Q14185 1865 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 NRXN2Q9P2S2 1712 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 CFAP47Q6ZTR5 3102 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 SDK1Q7Z5N4 2213 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 KMT2BQ9UMN6 2715 aaPredicted RBP2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 TRAV13-2A0A0B4J235 113 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 IGHV3-30P01768 117 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 IGKCP01834 107 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 IGHV3-30-5P0DP03 117 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 KRTDAPP60985 99 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 LYPD5Q6UWN5 251 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 NDUFA11Q86Y39 141 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 MYOZ3Q8TDC0 251 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 CYSTM1Q9H1C7 97 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 HEATR1Q9H583 2144 aaKnown RBP2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 C22orf24Q9Y442 160 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 CD163L1Q9NR16 1453 aa2.25□□□□□ -2.05
TM9SF3-202ENST00000443638 LTN1O94822 1766 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 LAMB1P07942 1786 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 BCORQ6W2J9 1755 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 WDFY4Q6ZS81 3184 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 TRBV10-1A0A0K0K1A3 114 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 hADV29S1A0JD25 119 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 NAP1L6A6NFF2 107 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 IGLV3-1P01715 115 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 C6orf52Q5T4I8 152 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 UNQ6190/PRO20217Q6UXQ8 127 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 BDP1A6H8Y1 2624 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 MRC1P22897 1456 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 SPTBN4Q9H254 2564 aa2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 SETXQ7Z333 2677 aaKnown RBP2.24□□□□□ -2.05
TM9SF3-202ENST00000443638 NCOR1O75376 2440 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 ARFGEF3Q5TH69 2177 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 ZFHX4Q86UP3 3567 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 TRANK1O15050 2925 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 NUPR2A6NF83 97 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 K7EP34 96 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 ATOX1O00244 68 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 PPYP01298 95 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 TFF1P04155 84 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 GNG11P61952 73 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 PEA15Q15121 130 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 C10orf82Q8WW14 230 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 ODF3Q96PU9 254 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 CYP4F30PQ9H0H9 118 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 DCHS1Q96JQ0 3298 aa2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 PTPRZ1P23471 2315 aaPredicted RBP2.23□□□□□ -2.05
TM9SF3-202ENST00000443638 ARAP2Q8WZ64 1704 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 C5orf42Q9H799 3197 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 EPG5Q9HCE0 2579 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 CR1P17927 2039 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 FASNP49327 2511 aaKnown RBP2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 TNRC6AQ8NDV7 1962 aaKnown RBP2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 IGKV3-7A0A075B6H7 116 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 HCG22E2RYF7 251 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 JMJD7-PLA2G4BH0Y9G9 81 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 PDE6GP18545 87 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 CCL8P80075 99 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 ZNF563Q8TA94 476 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 DMAC1Q96GE9 116 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 LINC00474Q9P2X8 69 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 MUC22E2RYF6 1773 aaPredicted RBP2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 NINQ8N4C6 2090 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 COL4A6Q14031 1691 aa2.22□□□□□ -2.05
TM9SF3-202ENST00000443638 KDM3BQ7LBC6 1761 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 TPRP12270 2363 aaKnown RBP2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 TRAV12-3A0A0B4J271 114 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 TRBV7-7A0A0K0K1E9 115 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 CYB5AP00167 134 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 SEC11AP67812 179 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 LINC00322Q6ZN03 302 aaPredicted RBP2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 GBF1Q92538 1859 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 TSLPQ969D9 159 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 IFI27L1Q96BM0 104 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 S100A13Q99584 98 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 MGST2Q99735 147 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 MRPL36Q9P0J6 103 aaKnown RBP2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 PCNX2A6NKB5 2137 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 REV3LO60673 3130 aa2.21□□□□□ -2.06
TM9SF3-202ENST00000443638 CHD6Q8TD26 2715 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 USP34Q70CQ2 3546 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 TJP1Q07157 1748 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 CDH23Q9H251 3354 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 TRBV7-1A0A0A6YYK4 115 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 SIX6O95475 246 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 SFT2D2O95562 160 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 FAUP35544 74 aaKnown RBP2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 TMEM14CQ9P0S9 112 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 PTPRFP10586 1907 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 MYH8P13535 1937 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 CEP192Q8TEP8 1941 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms