RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 RETNQ9HD89 108 aa11.45□□□□□ -0.58
NEDD4-202ENST00000435532 PYGO1Q9Y3Y4 419 aa11.45□□□□□ -0.58
NEDD4-202ENST00000435532 PCNX3Q9H6A9 2034 aa11.44□□□□□ -0.58
NEDD4-202ENST00000435532 PROK1P58294 105 aa11.44□□□□□ -0.58
NEDD4-202ENST00000435532 RBM3P98179 157 aaKnown RBP11.44□□□□□ -0.58
NEDD4-202ENST00000435532 ETDBQ3ZM63 59 aa11.43□□□□□ -0.58
NEDD4-202ENST00000435532 RNASE3P12724 160 aaKnown RBP11.43□□□□□ -0.58
NEDD4-202ENST00000435532 CRIP1P50238 77 aa11.43□□□□□ -0.58
NEDD4-202ENST00000435532 PRRC2AP48634 2157 aaKnown RBP11.42□□□□□ -0.58
NEDD4-202ENST00000435532 SPANXB1Q9NS25 103 aaPredicted RBP11.42□□□□□ -0.58
NEDD4-202ENST00000435532 TRBV27A0A0K0K1C4 114 aa11.42□□□□□ -0.58
NEDD4-202ENST00000435532 CDKN2A-AS1Q9UH64 79 aa11.42□□□□□ -0.58
NEDD4-202ENST00000435532 A0A0J9YXY3 114 aa11.41□□□□□ -0.58
NEDD4-202ENST00000435532 MP68P56378 58 aa11.41□□□□□ -0.58
NEDD4-202ENST00000435532 LOC100131303A0A0U1RQF7 123 aa11.41□□□□□ -0.58
NEDD4-202ENST00000435532 H0Y9J4 135 aa11.41□□□□□ -0.58
NEDD4-202ENST00000435532 NAV2Q8IVL1 2488 aa11.4□□□□□ -0.58
NEDD4-202ENST00000435532 IGLV2-11P01706 119 aa11.4□□□□□ -0.58
NEDD4-202ENST00000435532 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.58
NEDD4-202ENST00000435532 NACAE9PAV3 2078 aa11.4□□□□□ -0.59
NEDD4-202ENST00000435532 TMEM223A0PJW6 202 aa11.4□□□□□ -0.59
NEDD4-202ENST00000435532 PRR9Q5T870 116 aa11.39□□□□□ -0.59
NEDD4-202ENST00000435532 K7EP13 123 aa11.39□□□□□ -0.59
NEDD4-202ENST00000435532 NUPR1O60356 82 aa11.39□□□□□ -0.59
NEDD4-202ENST00000435532 TNRC6BQ9UPQ9 1833 aaKnown RBP11.39□□□□□ -0.59
NEDD4-202ENST00000435532 LINC00959A0A1B0GUT2 108 aa11.39□□□□□ -0.59
NEDD4-202ENST00000435532 UBE2D3P61077 147 aa11.39□□□□□ -0.59
NEDD4-202ENST00000435532 UBE2D2P62837 147 aa11.39□□□□□ -0.59
NEDD4-202ENST00000435532 MRPS36P82909 103 aaKnown RBP11.39□□□□□ -0.59
NEDD4-202ENST00000435532 Q8N2B8 174 aa11.39□□□□□ -0.59
NEDD4-202ENST00000435532 CHKB-CPT1BH3BT56 60 aa11.38□□□□□ -0.59
NEDD4-202ENST00000435532 A0A1B0GX51 115 aa11.38□□□□□ -0.59
NEDD4-202ENST00000435532 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
NEDD4-202ENST00000435532 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
NEDD4-202ENST00000435532 TSHBP01222 138 aa11.37□□□□□ -0.59
NEDD4-202ENST00000435532 RNF185Q96GF1 192 aa11.37□□□□□ -0.59
NEDD4-202ENST00000435532 IGF2RP11717 2491 aa11.37□□□□□ -0.59
NEDD4-202ENST00000435532 MUC7Q8TAX7 377 aa11.37□□□□□ -0.59
NEDD4-202ENST00000435532 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
NEDD4-202ENST00000435532 C1orf134Q5TEV5 83 aa11.37□□□□□ -0.59
NEDD4-202ENST00000435532 RAI1Q7Z5J4 1906 aaPredicted RBP11.37□□□□□ -0.59
NEDD4-202ENST00000435532 M0R378 163 aa11.36□□□□□ -0.59
NEDD4-202ENST00000435532 ATRXP46100 2492 aa11.36□□□□□ -0.59
NEDD4-202ENST00000435532 IGLV5-52A0A0A0MRZ9 124 aa11.36□□□□□ -0.59
NEDD4-202ENST00000435532 XAGE1AQ9HD64 81 aa11.36□□□□□ -0.59
NEDD4-202ENST00000435532 Q6ZTC4 211 aa11.35□□□□□ -0.59
NEDD4-202ENST00000435532 KIAA1549Q9HCM3 1950 aa11.35□□□□□ -0.59
NEDD4-202ENST00000435532 NAV3Q8IVL0 2385 aa11.35□□□□□ -0.59
NEDD4-202ENST00000435532 COL4A2P08572 1712 aa11.35□□□□□ -0.59
NEDD4-202ENST00000435532 DHRS4-AS1Q9P1J3 65 aa11.34□□□□□ -0.59
NEDD4-202ENST00000435532 EDN2P20800 178 aa11.34□□□□□ -0.59
NEDD4-202ENST00000435532 UBE2D4Q9Y2X8 147 aa11.34□□□□□ -0.59
NEDD4-202ENST00000435532 H3BT86 120 aa11.33□□□□□ -0.6
NEDD4-202ENST00000435532 TRBV10-2A0A0K0K1G8 114 aa11.33□□□□□ -0.6
NEDD4-202ENST00000435532 COX17Q14061 63 aa11.33□□□□□ -0.6
NEDD4-202ENST00000435532 CLEC2BQ92478 149 aa11.33□□□□□ -0.6
NEDD4-202ENST00000435532 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
NEDD4-202ENST00000435532 TRAV23DV6A0A075B6W5 121 aa11.32□□□□□ -0.6
NEDD4-202ENST00000435532 FXYD2P54710 66 aa11.32□□□□□ -0.6
NEDD4-202ENST00000435532 C11orf21Q9P2W6 132 aa11.32□□□□□ -0.6
NEDD4-202ENST00000435532 G3V4G9 280 aa11.32□□□□□ -0.6
NEDD4-202ENST00000435532 IGKV2D-26A0A0A0MRZ7 120 aa11.32□□□□□ -0.6
NEDD4-202ENST00000435532 PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
NEDD4-202ENST00000435532 FSHBP01225 129 aa11.31□□□□□ -0.6
NEDD4-202ENST00000435532 A0A096LNI7 61 aa11.31□□□□□ -0.6
NEDD4-202ENST00000435532 MYO18BQ8IUG5 2567 aa11.31□□□□□ -0.6
NEDD4-202ENST00000435532 PRM2P04554 102 aa11.3□□□□□ -0.6
NEDD4-202ENST00000435532 C1orf158Q8N1D5 194 aa11.3□□□□□ -0.6
NEDD4-202ENST00000435532 SS18L2Q9UHA2 77 aa11.3□□□□□ -0.6
NEDD4-202ENST00000435532 CPAMD8Q8IZJ3 1885 aa11.3□□□□□ -0.6
NEDD4-202ENST00000435532 HIVEP3Q5T1R4 2406 aa11.3□□□□□ -0.6
NEDD4-202ENST00000435532 LINC00308Q8TCZ7 52 aa11.3□□□□□ -0.6
NEDD4-202ENST00000435532 MRPS12O15235 138 aaKnown RBP11.29□□□□□ -0.6
NEDD4-202ENST00000435532 FHL3Q13643 280 aa11.29□□□□□ -0.6
NEDD4-202ENST00000435532 Q8IZM0 81 aa11.29□□□□□ -0.6
NEDD4-202ENST00000435532 F8WDY8 70 aa11.29□□□□□ -0.6
NEDD4-202ENST00000435532 NRACQ8N912 160 aa11.29□□□□□ -0.6
NEDD4-202ENST00000435532 TIMM17BO60830 172 aa11.29□□□□□ -0.6
NEDD4-202ENST00000435532 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
NEDD4-202ENST00000435532 POLR2KP53803 58 aaKnown RBP11.28□□□□□ -0.6
NEDD4-202ENST00000435532 FHL2Q14192 279 aa11.28□□□□□ -0.6
NEDD4-202ENST00000435532 RPL28P46779 137 aaKnown RBP11.27□□□□□ -0.6
NEDD4-202ENST00000435532 UPK3BQ9BT76 320 aa11.27□□□□□ -0.6
NEDD4-202ENST00000435532 CDC42SE2Q9NRR3 84 aa11.27□□□□□ -0.6
NEDD4-202ENST00000435532 RNASE8Q8TDE3 154 aaKnown RBP11.27□□□□□ -0.61
NEDD4-202ENST00000435532 TNCP24821 2201 aa11.27□□□□□ -0.61
NEDD4-202ENST00000435532 IGKV2-28A0A075B6P5 120 aa11.27□□□□□ -0.61
NEDD4-202ENST00000435532 IGKV2D-28P01615 120 aa11.27□□□□□ -0.61
NEDD4-202ENST00000435532 KRTAP24-1Q3LI83 254 aa11.26□□□□□ -0.61
NEDD4-202ENST00000435532 EGFEM1PQ0D2K5 195 aa11.25□□□□□ -0.61
NEDD4-202ENST00000435532 SMIM20Q8N5G0 67 aa11.25□□□□□ -0.61
NEDD4-202ENST00000435532 PTH2Q96A98 100 aa11.25□□□□□ -0.61
NEDD4-202ENST00000435532 BPY2O14599 106 aa11.25□□□□□ -0.61
NEDD4-202ENST00000435532 TEN1Q86WV5 123 aa11.24□□□□□ -0.61
NEDD4-202ENST00000435532 ATG2AQ2TAZ0 1938 aa11.24□□□□□ -0.61
NEDD4-202ENST00000435532 LINC00526Q96FQ7 95 aa11.24□□□□□ -0.61
NEDD4-202ENST00000435532 CNFNQ9BYD5 112 aa11.24□□□□□ -0.61
NEDD4-202ENST00000435532 BEAN1Q3B7T3 259 aa11.24□□□□□ -0.61
NEDD4-202ENST00000435532 EML5Q05BV3 1969 aa11.23□□□□□ -0.61
NEDD4-202ENST00000435532 SONP18583 2426 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms