RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 UBE2AP49459 152 aa10.4□□□□□ -0.74
SREBF2-202ENST00000424354 MAP6D1Q9H9H5 199 aa10.4□□□□□ -0.75
SREBF2-202ENST00000424354 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
SREBF2-202ENST00000424354 KLK12Q9UKR0 248 aa10.39□□□□□ -0.75
SREBF2-202ENST00000424354 LRRK2Q5S007 2527 aa10.39□□□□□ -0.75
SREBF2-202ENST00000424354 IBA57-AS1B1ANH7 110 aa10.39□□□□□ -0.75
SREBF2-202ENST00000424354 NDUFC2-KCTD14E9PQ53 114 aa10.38□□□□□ -0.75
SREBF2-202ENST00000424354 CRIP1P50238 77 aa10.38□□□□□ -0.75
SREBF2-202ENST00000424354 PLXNB1O43157 2135 aa10.38□□□□□ -0.75
SREBF2-202ENST00000424354 WNK1Q9H4A3 2382 aa10.38□□□□□ -0.75
SREBF2-202ENST00000424354 LINC00467Q9BRT7 94 aa10.38□□□□□ -0.75
SREBF2-202ENST00000424354 TIMM17BO60830 172 aa10.38□□□□□ -0.75
SREBF2-202ENST00000424354 ATP5EP56381 51 aaPredicted RBP10.38□□□□□ -0.75
SREBF2-202ENST00000424354 ESM1Q9NQ30 184 aa10.38□□□□□ -0.75
SREBF2-202ENST00000424354 CFAP126Q5VTH2 177 aa10.37□□□□□ -0.75
SREBF2-202ENST00000424354 MRPS12O15235 138 aaKnown RBP10.37□□□□□ -0.75
SREBF2-202ENST00000424354 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
SREBF2-202ENST00000424354 FAM240AA0A1B0GVK7 77 aa10.36□□□□□ -0.75
SREBF2-202ENST00000424354 NDUFA7O95182 113 aa10.36□□□□□ -0.75
SREBF2-202ENST00000424354 FSTL3O95633 263 aa10.36□□□□□ -0.75
SREBF2-202ENST00000424354 PYGO1Q9Y3Y4 419 aa10.36□□□□□ -0.75
SREBF2-202ENST00000424354 ENHOQ6UWT2 76 aa10.36□□□□□ -0.75
SREBF2-202ENST00000424354 SVIPQ8NHG7 77 aa10.36□□□□□ -0.75
SREBF2-202ENST00000424354 HIVEP3Q5T1R4 2406 aa10.36□□□□□ -0.75
SREBF2-202ENST00000424354 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
SREBF2-202ENST00000424354 NDUFC1O43677 76 aa10.35□□□□□ -0.75
SREBF2-202ENST00000424354 IGF1P05019 195 aa10.35□□□□□ -0.75
SREBF2-202ENST00000424354 DYSFO75923 2080 aa10.35□□□□□ -0.75
SREBF2-202ENST00000424354 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
SREBF2-202ENST00000424354 M0QY20 66 aa10.35□□□□□ -0.75
SREBF2-202ENST00000424354 SERP2Q8N6R1 65 aa10.35□□□□□ -0.75
SREBF2-202ENST00000424354 K7EQG2 157 aa10.35□□□□□ -0.75
SREBF2-202ENST00000424354 IGLV2-11P01706 119 aa10.35□□□□□ -0.75
SREBF2-202ENST00000424354 EPG5Q9HCE0 2579 aa10.34□□□□□ -0.75
SREBF2-202ENST00000424354 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
SREBF2-202ENST00000424354 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
SREBF2-202ENST00000424354 F8W735 103 aaPredicted RBP10.34□□□□□ -0.75
SREBF2-202ENST00000424354 ARHGAP21Q5T5U3 1957 aa10.34□□□□□ -0.75
SREBF2-202ENST00000424354 H0Y9J4 135 aa10.34□□□□□ -0.75
SREBF2-202ENST00000424354 C20orf173Q96LM9 149 aa10.34□□□□□ -0.75
SREBF2-202ENST00000424354 ZFAND3Q9H8U3 227 aa10.34□□□□□ -0.75
SREBF2-202ENST00000424354 KLK5Q9Y337 293 aaPredicted RBP10.34□□□□□ -0.75
SREBF2-202ENST00000424354 TNFRSF13BO14836 293 aaPredicted RBP10.33□□□□□ -0.76
SREBF2-202ENST00000424354 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
SREBF2-202ENST00000424354 Q6ZTI0 123 aa10.33□□□□□ -0.76
SREBF2-202ENST00000424354 REG3AQ06141 175 aa10.33□□□□□ -0.76
SREBF2-202ENST00000424354 MPLKIPQ8TAP9 179 aa10.33□□□□□ -0.76
SREBF2-202ENST00000424354 INSL3P51460 131 aa10.32□□□□□ -0.76
SREBF2-202ENST00000424354 SMAD5-AS1Q9Y6J3 95 aa10.32□□□□□ -0.76
SREBF2-202ENST00000424354 LST1O00453 97 aa10.32□□□□□ -0.76
SREBF2-202ENST00000424354 NRACQ8N912 160 aa10.32□□□□□ -0.76
SREBF2-202ENST00000424354 EBI3Q14213 229 aa10.32□□□□□ -0.76
SREBF2-202ENST00000424354 SEC61GP60059 68 aa10.31□□□□□ -0.76
SREBF2-202ENST00000424354 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
SREBF2-202ENST00000424354 PIK3CD-AS1Q5SR53 167 aa10.31□□□□□ -0.76
SREBF2-202ENST00000424354 LINC00269Q8N2A0 174 aa10.31□□□□□ -0.76
SREBF2-202ENST00000424354 B9D2Q9BPU9 175 aa10.31□□□□□ -0.76
SREBF2-202ENST00000424354 V9GYY9 64 aa10.31□□□□□ -0.76
SREBF2-202ENST00000424354 CFAP54Q96N23 3096 aa10.31□□□□□ -0.76
SREBF2-202ENST00000424354 SLPIP03973 132 aa10.3□□□□□ -0.76
SREBF2-202ENST00000424354 CHCHD10Q8WYQ3 142 aaPredicted RBP10.3□□□□□ -0.76
SREBF2-202ENST00000424354 COX7CP15954 63 aa10.3□□□□□ -0.76
SREBF2-202ENST00000424354 SPTSSBQ8NFR3 76 aa10.3□□□□□ -0.76
SREBF2-202ENST00000424354 LINC01548A6NM66 108 aa10.3□□□□□ -0.76
SREBF2-202ENST00000424354 USP17L23D6RBM5 183 aa10.3□□□□□ -0.76
SREBF2-202ENST00000424354 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
SREBF2-202ENST00000424354 Q6Q795 121 aa10.3□□□□□ -0.76
SREBF2-202ENST00000424354 XGP55808 180 aa10.29□□□□□ -0.76
SREBF2-202ENST00000424354 SMIM9A6NGZ8 99 aa10.29□□□□□ -0.76
SREBF2-202ENST00000424354 LMO4P61968 165 aa10.28□□□□□ -0.76
SREBF2-202ENST00000424354 LYRM9A8MSI8 78 aa10.28□□□□□ -0.76
SREBF2-202ENST00000424354 C2CD3Q4AC94 2353 aa10.28□□□□□ -0.76
SREBF2-202ENST00000424354 DEFB4AO15263 64 aa10.28□□□□□ -0.76
SREBF2-202ENST00000424354 DNAJC9-AS1A6NH13 148 aa10.27□□□□□ -0.76
SREBF2-202ENST00000424354 CCDC179H3BU77 68 aa10.27□□□□□ -0.77
SREBF2-202ENST00000424354 IGKV4-1P06312 121 aa10.27□□□□□ -0.77
SREBF2-202ENST00000424354 TSHBP01222 138 aa10.27□□□□□ -0.77
SREBF2-202ENST00000424354 IL17DQ8TAD2 202 aa10.27□□□□□ -0.77
SREBF2-202ENST00000424354 POLQO75417 2590 aa10.27□□□□□ -0.77
SREBF2-202ENST00000424354 VPS13AQ96RL7 3174 aa10.27□□□□□ -0.77
SREBF2-202ENST00000424354 FASNP49327 2511 aaKnown RBP10.26□□□□□ -0.77
SREBF2-202ENST00000424354 TRBV6-4A0A1B0GX49 114 aa10.26□□□□□ -0.77
SREBF2-202ENST00000424354 SCXQ7RTU7 201 aa10.26□□□□□ -0.77
SREBF2-202ENST00000424354 LAMA1P25391 3075 aa10.26□□□□□ -0.77
SREBF2-202ENST00000424354 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
SREBF2-202ENST00000424354 C14orf177Q52M58 125 aa10.25□□□□□ -0.77
SREBF2-202ENST00000424354 Q8N976 141 aa10.25□□□□□ -0.77
SREBF2-202ENST00000424354 PTPRBP23467 1997 aa10.25□□□□□ -0.77
SREBF2-202ENST00000424354 DEFB114Q30KQ6 69 aa10.25□□□□□ -0.77
SREBF2-202ENST00000424354 C6orf99Q4VX62 202 aa10.25□□□□□ -0.77
SREBF2-202ENST00000424354 NAV3Q8IVL0 2385 aa10.25□□□□□ -0.77
SREBF2-202ENST00000424354 LINC00310P59036 64 aa10.25□□□□□ -0.77
SREBF2-202ENST00000424354 CNFNQ9BYD5 112 aa10.25□□□□□ -0.77
SREBF2-202ENST00000424354 VCANP13611 3396 aa10.24□□□□□ -0.77
SREBF2-202ENST00000424354 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
SREBF2-202ENST00000424354 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
SREBF2-202ENST00000424354 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
SREBF2-202ENST00000424354 HIVEP2P31629 2446 aa10.24□□□□□ -0.77
SREBF2-202ENST00000424354 POLR2KP53803 58 aaKnown RBP10.24□□□□□ -0.77
SREBF2-202ENST00000424354 C22orf34Q6ZV56 151 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms