RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GEMIN7Q9H840 131 aaKnown RBP3.63□□□□□ -1.83
SDCBP-203ENST00000424270 FLVCR2Q9UPI3 526 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 ALG5Q9Y673 324 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 IGKV2D-26A0A0A0MRZ7 120 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 A0A1W2PPV4 95 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 KRBOX1C9JBD0 128 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 RPL12P30050 165 aaKnown RBP3.62□□□□□ -1.83
SDCBP-203ENST00000424270 BTCP35070 178 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 NKX2-5P52952 324 aaPredicted RBP3.62□□□□□ -1.83
SDCBP-203ENST00000424270 SUMO2P61956 95 aaKnown RBP3.62□□□□□ -1.83
SDCBP-203ENST00000424270 SPANXN1Q5VSR9 72 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 COX6B2Q6YFQ2 88 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 C5orf17Q8NAS9 161 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 OR5C1Q8NGR4 320 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 ZNF471Q9BX82 626 aaPredicted RBP3.62□□□□□ -1.83
SDCBP-203ENST00000424270 ANAPC11Q9NYG5 84 aa3.62□□□□□ -1.83
SDCBP-203ENST00000424270 MUC21A0A140T8X8 626 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 IGSF23A1L1A6 192 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 C19orf71A6NCJ1 209 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 C9orf118A6NHY6 69 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-203ENST00000424270 HMGB3O15347 200 aaKnown RBP3.61□□□□□ -1.83
SDCBP-203ENST00000424270 NDUFB6O95139 128 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 MEF2BQ02080 365 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-203ENST00000424270 SS18Q15532 418 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 GAGE2EQ4V326 116 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 NUP35Q8NFH5 326 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 BTF3L4Q96K17 158 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 GAGE2DQ9UEU5 116 aa3.61□□□□□ -1.83
SDCBP-203ENST00000424270 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-203ENST00000424270 BCL2L11O43521 198 aa3.6□□□□□ -1.83
SDCBP-203ENST00000424270 SSNA1O43805 119 aa3.6□□□□□ -1.83
SDCBP-203ENST00000424270 SH2D1AO60880 128 aa3.6□□□□□ -1.83
SDCBP-203ENST00000424270 RPL28P46779 137 aaKnown RBP3.6□□□□□ -1.83
SDCBP-203ENST00000424270 SNRPEP62304 92 aaKnown RBP3.6□□□□□ -1.83
SDCBP-203ENST00000424270 PQLC2Q6ZP29 291 aa3.6□□□□□ -1.83
SDCBP-203ENST00000424270 FP248Q71RG6 208 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-203ENST00000424270 TMEM252Q8N6L7 170 aa3.6□□□□□ -1.83
SDCBP-203ENST00000424270 TMEM101Q96IK0 257 aa3.6□□□□□ -1.83
SDCBP-203ENST00000424270 ARL2-SNX15V9GYD0 113 aa3.6□□□□□ -1.83
SDCBP-203ENST00000424270 VCYO14598 125 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 GIPP09681 153 aaPredicted RBP3.59□□□□□ -1.83
SDCBP-203ENST00000424270 S100A1P23297 94 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 FHITP49789 147 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 SEC61GP60059 68 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 IFITM2Q01629 132 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 RNF151Q2KHN1 245 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 DNLZQ5SXM8 178 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 OR10AG1Q8NH19 301 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 PGLYRP4Q96LB8 373 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 AP1S3Q96PC3 154 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 IMMP2LQ96T52 175 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 EPDR1Q9UM22 224 aa3.59□□□□□ -1.83
SDCBP-203ENST00000424270 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-203ENST00000424270 LINC00959A0A1B0GUT2 108 aa3.58□□□□□ -1.84
SDCBP-203ENST00000424270 IGKV2-29A2NJV5 120 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-203ENST00000424270 COX7A2LO14548 114 aa3.58□□□□□ -1.84
SDCBP-203ENST00000424270 DAND5Q8N907 189 aa3.58□□□□□ -1.84
SDCBP-203ENST00000424270 OR2D3Q8NGH3 330 aa3.58□□□□□ -1.84
SDCBP-203ENST00000424270 SCGB1C1Q8TD33 95 aa3.58□□□□□ -1.84
SDCBP-203ENST00000424270 SEC22CQ9BRL7 303 aa3.58□□□□□ -1.84
SDCBP-203ENST00000424270 WDR61Q9GZS3 305 aaKnown RBP3.58□□□□□ -1.84
SDCBP-203ENST00000424270 NDUFA12Q9UI09 145 aa3.58□□□□□ -1.84
SDCBP-203ENST00000424270 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
SDCBP-203ENST00000424270 IGLV8-61A0A075B6I0 122 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 HMSDA8MTL9 139 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 NUPR1O60356 82 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 ARL14EPLP0DKL9 152 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 NHLH2Q02577 135 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 SPAG11BQ08648 103 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 KRTAP13-2Q52LG2 175 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 C9orf62Q8N4C0 152 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 HSPB11Q9Y547 144 aa3.57□□□□□ -1.84
SDCBP-203ENST00000424270 M0QY20 66 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 PRYO14603 147 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 APCSP02743 223 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 ESDP10768 282 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 UBE2G1P62253 170 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 C6orf226Q5I0X4 101 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 SUMO4Q6EEV6 95 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 RASL11AQ6T310 242 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 Q86TA4 180 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 C2orf48Q96LS8 159 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 KIR2DL4Q99706 377 aa3.56□□□□□ -1.84
SDCBP-203ENST00000424270 RAB19A4D1S5 217 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 SMLR1H3BR10 107 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 OR5AL1P0C617 328 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 UBE2AP49459 152 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 CRIP1P50238 77 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 HERV-K104P63124 156 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 VAMP3Q15836 100 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 Q5BKY6 102 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 GAGE2AQ6NT46 116 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 TEX261Q6UWH6 196 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 C11orf1Q9H5F2 150 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 NIT2Q9NQR4 276 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 LINC00846Q9NV44 126 aa3.55□□□□□ -1.84
SDCBP-203ENST00000424270 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms