RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ZANQ9Y493 2812 aa12.01□□□□□ -0.49
NPC1L1-203ENST00000423141 NCOR2Q9Y618 2525 aa12.01□□□□□ -0.49
NPC1L1-203ENST00000423141 IGLV5-39A0A0G2JS06 123 aa12.01□□□□□ -0.49
NPC1L1-203ENST00000423141 DGAT2L7PQ6IED9 249 aa12.01□□□□□ -0.49
NPC1L1-203ENST00000423141 RNF152Q8N8N0 203 aa12.01□□□□□ -0.49
NPC1L1-203ENST00000423141 LINC00694P0DN24 101 aa12□□□□□ -0.49
NPC1L1-203ENST00000423141 DEFB131AP59861 70 aa12□□□□□ -0.49
NPC1L1-203ENST00000423141 IGHV4-59P01825 116 aa12□□□□□ -0.49
NPC1L1-203ENST00000423141 C3orf22Q8N5N4 141 aa12□□□□□ -0.49
NPC1L1-203ENST00000423141 KLK5Q9Y337 293 aaPredicted RBP12□□□□□ -0.49
NPC1L1-203ENST00000423141 Q9HAA7 133 aa11.99□□□□□ -0.49
NPC1L1-203ENST00000423141 CHD8Q9HCK8 2581 aa11.99□□□□□ -0.49
NPC1L1-203ENST00000423141 SMIM1B2RUZ4 78 aa11.99□□□□□ -0.49
NPC1L1-203ENST00000423141 PIK3CD-AS1Q5SR53 167 aa11.99□□□□□ -0.49
NPC1L1-203ENST00000423141 PIMREGQ9BSJ6 248 aa11.99□□□□□ -0.49
NPC1L1-203ENST00000423141 HOXD3P31249 432 aaPredicted RBP11.98□□□□□ -0.49
NPC1L1-203ENST00000423141 TRAV13-1A0A0B4J241 112 aa11.98□□□□□ -0.49
NPC1L1-203ENST00000423141 IGHV3-53P01767 116 aa11.98□□□□□ -0.49
NPC1L1-203ENST00000423141 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
NPC1L1-203ENST00000423141 PRIMA1Q86XR5 153 aa11.98□□□□□ -0.49
NPC1L1-203ENST00000423141 IGHV4-30-2A0A087WSY4 118 aa11.97□□□□□ -0.49
NPC1L1-203ENST00000423141 TRACP01848 142 aa11.97□□□□□ -0.49
NPC1L1-203ENST00000423141 ZNF415Q09FC8 603 aa11.97□□□□□ -0.49
NPC1L1-203ENST00000423141 GAGE2AQ6NT46 116 aa11.97□□□□□ -0.49
NPC1L1-203ENST00000423141 HERVK_113P63121 156 aa11.96□□□□□ -0.49
NPC1L1-203ENST00000423141 C11orf72Q8NBR9 251 aa11.96□□□□□ -0.5
NPC1L1-203ENST00000423141 C10orf105Q8TEF2 133 aa11.96□□□□□ -0.5
NPC1L1-203ENST00000423141 LOC107984640A0A0U1RRK4 108 aa11.95□□□□□ -0.5
NPC1L1-203ENST00000423141 UQCRQO14949 82 aa11.95□□□□□ -0.5
NPC1L1-203ENST00000423141 PEMTQ9UBM1 199 aa11.95□□□□□ -0.5
NPC1L1-203ENST00000423141 MXRA5Q9NR99 2828 aa11.95□□□□□ -0.5
NPC1L1-203ENST00000423141 NOTCH3Q9UM47 2321 aa11.94□□□□□ -0.5
NPC1L1-203ENST00000423141 MSMBP08118 114 aa11.94□□□□□ -0.5
NPC1L1-203ENST00000423141 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
NPC1L1-203ENST00000423141 C5orf38Q86SI9 138 aa11.94□□□□□ -0.5
NPC1L1-203ENST00000423141 USP9YO00507 2555 aaPredicted RBP11.94□□□□□ -0.5
NPC1L1-203ENST00000423141 DEFB112Q30KQ8 113 aa11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 C9orf129Q5T035 196 aaKnown RBP11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 LINC00526Q96FQ7 95 aa11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 ITPR1Q14643 2758 aa11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 TMEM89A2RUT3 159 aa11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 RS1O15537 224 aa11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 NBL1P41271 181 aa11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 C18orf65Q6ZTR6 163 aa11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
NPC1L1-203ENST00000423141 LY6DQ14210 128 aa11.92□□□□□ -0.5
NPC1L1-203ENST00000423141 SLURP1P55000 103 aa11.92□□□□□ -0.5
NPC1L1-203ENST00000423141 PRORYQ9H606 182 aa11.92□□□□□ -0.5
NPC1L1-203ENST00000423141 AKAP9Q99996 3911 aa11.92□□□□□ -0.5
NPC1L1-203ENST00000423141 F5H768 121 aa11.91□□□□□ -0.5
NPC1L1-203ENST00000423141 Q96MF0 132 aa11.91□□□□□ -0.5
NPC1L1-203ENST00000423141 MALP21145 153 aa11.9□□□□□ -0.5
NPC1L1-203ENST00000423141 C2orf48Q96LS8 159 aa11.9□□□□□ -0.5
NPC1L1-203ENST00000423141 UTP20O75691 2785 aaKnown RBP11.9□□□□□ -0.5
NPC1L1-203ENST00000423141 FAM222AQ5U5X8 452 aa11.9□□□□□ -0.5
NPC1L1-203ENST00000423141 NTM-AS1Q6ZSK4 140 aa11.9□□□□□ -0.5
NPC1L1-203ENST00000423141 LINC00337Q8N6G1 96 aa11.9□□□□□ -0.5
NPC1L1-203ENST00000423141 CXCL5P42830 114 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 HIST2H2BCQ6DN03 193 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 HIST2H2BDQ6DRA6 164 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 COPS9Q8WXC6 57 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 CCL19Q99731 98 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 CYSTM1Q9H1C7 97 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 MYO9AB2RTY4 2548 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 SPTBN4Q9H254 2564 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 A8MTW9 85 aa11.89□□□□□ -0.51
NPC1L1-203ENST00000423141 A0A087WYN8 130 aa11.88□□□□□ -0.51
NPC1L1-203ENST00000423141 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
NPC1L1-203ENST00000423141 COX7CP15954 63 aa11.88□□□□□ -0.51
NPC1L1-203ENST00000423141 ATP5J2P56134 94 aa11.88□□□□□ -0.51
NPC1L1-203ENST00000423141 NRGNQ92686 78 aa11.87□□□□□ -0.51
NPC1L1-203ENST00000423141 C14orf132Q9NPU4 83 aa11.87□□□□□ -0.51
NPC1L1-203ENST00000423141 IGKV2-28A0A075B6P5 120 aa11.87□□□□□ -0.51
NPC1L1-203ENST00000423141 IGKV2D-28P01615 120 aa11.87□□□□□ -0.51
NPC1L1-203ENST00000423141 ATP5G1P05496 136 aa11.87□□□□□ -0.51
NPC1L1-203ENST00000423141 UCNP55089 124 aa11.87□□□□□ -0.51
NPC1L1-203ENST00000423141 FAM19A3Q7Z5A8 133 aa11.87□□□□□ -0.51
NPC1L1-203ENST00000423141 RPL28P46779 137 aaKnown RBP11.86□□□□□ -0.51
NPC1L1-203ENST00000423141 FLNCQ14315 2725 aa11.86□□□□□ -0.51
NPC1L1-203ENST00000423141 HIST1H4AP62805 103 aaKnown RBP11.86□□□□□ -0.51
NPC1L1-203ENST00000423141 CDC42SE2Q9NRR3 84 aa11.86□□□□□ -0.51
NPC1L1-203ENST00000423141 IGKV3D-7A0A0C4DH55 119 aa11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 hADV29S1A0JD25 119 aa11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 CRPP02741 224 aa11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 MIR7-3HGQ8N6C7 128 aa11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 XCL2Q9UBD3 114 aa11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 NBPF19A0A087WUL8 3843 aa11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 TRGV1A0A0A0MS02 117 aa11.85□□□□□ -0.51
NPC1L1-203ENST00000423141 UBE2E2Q96LR5 201 aa11.84□□□□□ -0.51
NPC1L1-203ENST00000423141 POLQO75417 2590 aa11.84□□□□□ -0.51
NPC1L1-203ENST00000423141 DNAL4O96015 105 aa11.84□□□□□ -0.51
NPC1L1-203ENST00000423141 CHD6Q8TD26 2715 aa11.84□□□□□ -0.51
NPC1L1-203ENST00000423141 TRAV13-2A0A0B4J235 113 aa11.83□□□□□ -0.52
NPC1L1-203ENST00000423141 INSP01308 110 aa11.83□□□□□ -0.52
NPC1L1-203ENST00000423141 SMIM11BQ8TCY0 68 aa11.83□□□□□ -0.52
NPC1L1-203ENST00000423141 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
NPC1L1-203ENST00000423141 USP9XQ93008 2570 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-203ENST00000423141 A0A087WVE0 104 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms