RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 CFC1BP0CG36 223 aa16.6■□□□□ 0.25
LSM8-203ENST00000422760 CFC1P0CG37 223 aa16.6■□□□□ 0.25
LSM8-203ENST00000422760 CITED1Q99966 193 aa16.6■□□□□ 0.25
LSM8-203ENST00000422760 IGHV3-73A0A0B4J1V6 119 aa16.6■□□□□ 0.25
LSM8-203ENST00000422760 DEFB104AQ8WTQ1 72 aa16.6■□□□□ 0.25
LSM8-203ENST00000422760 TIMM21Q9BVV7 248 aa16.6■□□□□ 0.25
LSM8-203ENST00000422760 TEP1Q99973 2627 aaKnown RBP16.59■□□□□ 0.25
LSM8-203ENST00000422760 IL17DQ8TAD2 202 aa16.58■□□□□ 0.25
LSM8-203ENST00000422760 LOC107984156A0A0G2JMH3 177 aa16.58■□□□□ 0.24
LSM8-203ENST00000422760 ARL17AQ8IVW1 177 aa16.58■□□□□ 0.24
LSM8-203ENST00000422760 CHCHD7Q9BUK0 85 aa16.58■□□□□ 0.24
LSM8-203ENST00000422760 ETDBQ3ZM63 59 aa16.57■□□□□ 0.24
LSM8-203ENST00000422760 UBE2D4Q9Y2X8 147 aa16.57■□□□□ 0.24
LSM8-203ENST00000422760 IGHV1-58A0A0C4DH39 117 aa16.57■□□□□ 0.24
LSM8-203ENST00000422760 SCGB1A1P11684 91 aa16.57■□□□□ 0.24
LSM8-203ENST00000422760 INSL3P51460 131 aa16.57■□□□□ 0.24
LSM8-203ENST00000422760 IGHV3-30-3P0DP02 117 aa16.56■□□□□ 0.24
LSM8-203ENST00000422760 TMEM263Q8WUH6 116 aaKnown RBP16.56■□□□□ 0.24
LSM8-203ENST00000422760 M0QXV9 152 aa16.55■□□□□ 0.24
LSM8-203ENST00000422760 SMAGPQ0VAQ4 97 aa16.55■□□□□ 0.24
LSM8-203ENST00000422760 C9orf66Q5T8R8 295 aa16.55■□□□□ 0.24
LSM8-203ENST00000422760 FAM104AQ969W3 186 aa16.55■□□□□ 0.24
LSM8-203ENST00000422760 RNF183Q96D59 192 aa16.55■□□□□ 0.24
LSM8-203ENST00000422760 C1QTNF4Q9BXJ3 329 aa16.55■□□□□ 0.24
LSM8-203ENST00000422760 A0A0J9YXY3 114 aa16.54■□□□□ 0.24
LSM8-203ENST00000422760 PSMB2P49721 201 aa16.54■□□□□ 0.24
LSM8-203ENST00000422760 SPATA25Q9BR10 227 aa16.54■□□□□ 0.24
LSM8-203ENST00000422760 SBSPONQ8IVN8 264 aa16.53■□□□□ 0.24
LSM8-203ENST00000422760 TRBV10-1A0A0K0K1A3 114 aa16.53■□□□□ 0.24
LSM8-203ENST00000422760 A4D1N5 150 aa16.53■□□□□ 0.24
LSM8-203ENST00000422760 TIRAPP58753 221 aa16.53■□□□□ 0.24
LSM8-203ENST00000422760 CSNK1G2-AS1Q8NCQ2 148 aa16.53■□□□□ 0.24
LSM8-203ENST00000422760 SPANXDQ9BXN6 97 aa16.53■□□□□ 0.24
LSM8-203ENST00000422760 SPANXCQ9NY87 97 aa16.53■□□□□ 0.24
LSM8-203ENST00000422760 TIMM17BO60830 172 aa16.52■□□□□ 0.23
LSM8-203ENST00000422760 Q6ZSN1 163 aa16.52■□□□□ 0.23
LSM8-203ENST00000422760 SIGMAR1Q99720 223 aa16.52■□□□□ 0.23
LSM8-203ENST00000422760 SH2D6Q7Z4S9 175 aa16.51■□□□□ 0.23
LSM8-203ENST00000422760 VSIG2Q96IQ7 327 aa16.51■□□□□ 0.23
LSM8-203ENST00000422760 ERG28Q9UKR5 140 aa16.51■□□□□ 0.23
LSM8-203ENST00000422760 TRGV1A0A0A0MS02 117 aa16.51■□□□□ 0.23
LSM8-203ENST00000422760 GAGE12HA6NDE8 117 aa16.51■□□□□ 0.23
LSM8-203ENST00000422760 IGHV3-33P01772 117 aa16.51■□□□□ 0.23
LSM8-203ENST00000422760 IGLV5-45A0A087WSX0 123 aa16.49■□□□□ 0.23
LSM8-203ENST00000422760 MUSTN1Q8IVN3 82 aa16.49■□□□□ 0.23
LSM8-203ENST00000422760 GEMIN7Q9H840 131 aaKnown RBP16.49■□□□□ 0.23
LSM8-203ENST00000422760 CIDEAO60543 219 aa16.49■□□□□ 0.23
LSM8-203ENST00000422760 FOXI1Q12951 378 aa16.49■□□□□ 0.23
LSM8-203ENST00000422760 C16orf74Q96GX8 76 aa16.49■□□□□ 0.23
LSM8-203ENST00000422760 CSDC2Q9Y534 153 aaKnown RBP16.49■□□□□ 0.23
LSM8-203ENST00000422760 SCGB1C2P0DMR2 95 aa16.48■□□□□ 0.23
LSM8-203ENST00000422760 Q6ZTI0 123 aa16.48■□□□□ 0.23
LSM8-203ENST00000422760 Q9UF83 564 aa16.48■□□□□ 0.23
LSM8-203ENST00000422760 NDUFA12Q9UI09 145 aa16.48■□□□□ 0.23
LSM8-203ENST00000422760 PLAC8L1A1L4L8 177 aa16.47■□□□□ 0.23
LSM8-203ENST00000422760 TCL1BO95988 128 aa16.47■□□□□ 0.23
LSM8-203ENST00000422760 ZFAND6Q6FIF0 208 aa16.47■□□□□ 0.23
LSM8-203ENST00000422760 FAM19A3Q7Z5A8 133 aa16.47■□□□□ 0.23
LSM8-203ENST00000422760 TEN1Q86WV5 123 aa16.47■□□□□ 0.23
LSM8-203ENST00000422760 IFITM1P13164 125 aa16.47■□□□□ 0.23
LSM8-203ENST00000422760 PPDPFLQ8WWR9 84 aa16.47■□□□□ 0.23
LSM8-203ENST00000422760 SMCPP49901 116 aaPredicted RBP16.46■□□□□ 0.23
LSM8-203ENST00000422760 DAZ2Q13117 558 aaKnown RBP16.46■□□□□ 0.23
LSM8-203ENST00000422760 DAZ4Q86SG3 579 aaKnown RBP16.46■□□□□ 0.23
LSM8-203ENST00000422760 LITAFQ99732 161 aa16.46■□□□□ 0.23
LSM8-203ENST00000422760 NOP10Q9NPE3 64 aaKnown RBP16.46■□□□□ 0.23
LSM8-203ENST00000422760 DAZ3Q9NR90 486 aaKnown RBP16.46■□□□□ 0.23
LSM8-203ENST00000422760 IGHV3-64A0A075B6Q5 118 aa16.45■□□□□ 0.22
LSM8-203ENST00000422760 RPL36AP83881 106 aaKnown RBP16.45■□□□□ 0.22
LSM8-203ENST00000422760 DGAT2L7PQ6IED9 249 aa16.45■□□□□ 0.22
LSM8-203ENST00000422760 RPL36ALQ969Q0 106 aaKnown RBP16.45■□□□□ 0.22
LSM8-203ENST00000422760 BAHCC1Q9P281 2608 aa16.45■□□□□ 0.22
LSM8-203ENST00000422760 TRAV4A0A0B4J268 109 aa16.45■□□□□ 0.22
LSM8-203ENST00000422760 MIAQ16674 131 aa16.45■□□□□ 0.22
LSM8-203ENST00000422760 Q6ZUT4 128 aa16.45■□□□□ 0.22
LSM8-203ENST00000422760 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.44■□□□□ 0.22
LSM8-203ENST00000422760 IGKV2-29A2NJV5 120 aaPredicted RBP16.44■□□□□ 0.22
LSM8-203ENST00000422760 HERVK_113P63121 156 aa16.44■□□□□ 0.22
LSM8-203ENST00000422760 LINC01600Q96MT4 127 aa16.44■□□□□ 0.22
LSM8-203ENST00000422760 TRBV30A0A0K0K1B3 111 aa16.43■□□□□ 0.22
LSM8-203ENST00000422760 CEMP1Q6PRD7 247 aaPredicted RBP16.43■□□□□ 0.22
LSM8-203ENST00000422760 TRRAPQ9Y4A5 3859 aa16.43■□□□□ 0.22
LSM8-203ENST00000422760 COPS9Q8WXC6 57 aa16.42■□□□□ 0.22
LSM8-203ENST00000422760 K7EQD1 137 aa16.41■□□□□ 0.22
LSM8-203ENST00000422760 NDUFA1O15239 70 aa16.41■□□□□ 0.22
LSM8-203ENST00000422760 MTURNQ8N3F0 131 aa16.41■□□□□ 0.22
LSM8-203ENST00000422760 TRAV8-3A0A0A6YYJ7 113 aa16.4■□□□□ 0.22
LSM8-203ENST00000422760 ATXN8Q156A1 80 aa16.4■□□□□ 0.22
LSM8-203ENST00000422760 WFDC9Q8NEX5 89 aa16.4■□□□□ 0.22
LSM8-203ENST00000422760 CIRBPQ14011 172 aaKnown RBP16.39■□□□□ 0.21
LSM8-203ENST00000422760 KRTAP24-1Q3LI83 254 aa16.39■□□□□ 0.21
LSM8-203ENST00000422760 SFTA2Q6UW10 78 aa16.38■□□□□ 0.21
LSM8-203ENST00000422760 OVOL2Q9BRP0 275 aa16.38■□□□□ 0.21
LSM8-203ENST00000422760 IGLV5-39A0A0G2JS06 123 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 H7C423 109 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 EIF4EBP3O60516 100 aaPredicted RBP16.37■□□□□ 0.21
LSM8-203ENST00000422760 GAGE7O76087 117 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 SPINK8P0C7L1 97 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 GAGE12FP0CL80 117 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 GAGE12GP0CL81 117 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms