RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 K7EQG2 157 aa12.08□□□□□ -0.48
PKP4-204ENST00000421462 SOSTDC1Q6X4U4 206 aa12.08□□□□□ -0.48
PKP4-204ENST00000421462 COX7A2LO14548 114 aa12.07□□□□□ -0.48
PKP4-204ENST00000421462 ITPR1Q14643 2758 aa12.07□□□□□ -0.48
PKP4-204ENST00000421462 IGKV3OR2-268A0A0C4DH90 116 aa12.07□□□□□ -0.48
PKP4-204ENST00000421462 CFHR3Q02985 330 aa12.07□□□□□ -0.48
PKP4-204ENST00000421462 FAM218AQ96MZ4 157 aa12.07□□□□□ -0.48
PKP4-204ENST00000421462 IGLV1-40P01703 118 aa12.06□□□□□ -0.48
PKP4-204ENST00000421462 TMEM126AQ9H061 195 aa12.06□□□□□ -0.48
PKP4-204ENST00000421462 HERVK_113P63121 156 aa12.06□□□□□ -0.48
PKP4-204ENST00000421462 LINC01600Q96MT4 127 aa12.06□□□□□ -0.48
PKP4-204ENST00000421462 A6NDX4 124 aa12.05□□□□□ -0.48
PKP4-204ENST00000421462 TIRAPP58753 221 aa12.05□□□□□ -0.48
PKP4-204ENST00000421462 DEFB136Q30KP8 78 aa12.05□□□□□ -0.48
PKP4-204ENST00000421462 K7EMT4 169 aa12.05□□□□□ -0.48
PKP4-204ENST00000421462 IGHV3-53P01767 116 aa12.05□□□□□ -0.48
PKP4-204ENST00000421462 DEFB121Q5J5C9 76 aa12.05□□□□□ -0.48
PKP4-204ENST00000421462 C3orf22Q8N5N4 141 aa12.05□□□□□ -0.48
PKP4-204ENST00000421462 SPANXA1Q9NS26 97 aa12.05□□□□□ -0.48
PKP4-204ENST00000421462 NDUFA1O15239 70 aa12.04□□□□□ -0.48
PKP4-204ENST00000421462 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
PKP4-204ENST00000421462 LINC00643Q86TS7 51 aa12.04□□□□□ -0.48
PKP4-204ENST00000421462 H3BUA1 57 aa12.04□□□□□ -0.48
PKP4-204ENST00000421462 IGKV3D-7A0A0C4DH55 119 aa12.03□□□□□ -0.48
PKP4-204ENST00000421462 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
PKP4-204ENST00000421462 IGHV4-59P01825 116 aa12.03□□□□□ -0.48
PKP4-204ENST00000421462 TOMM7Q9P0U1 55 aa12.03□□□□□ -0.48
PKP4-204ENST00000421462 C19orf84I3L1E1 186 aa12.02□□□□□ -0.48
PKP4-204ENST00000421462 AVPP01185 164 aa12.02□□□□□ -0.49
PKP4-204ENST00000421462 ACYP1P07311 99 aa12.01□□□□□ -0.49
PKP4-204ENST00000421462 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PKP4-204ENST00000421462 hADV29S1A0JD25 119 aa12□□□□□ -0.49
PKP4-204ENST00000421462 PIMREGQ9BSJ6 248 aa12□□□□□ -0.49
PKP4-204ENST00000421462 CHD6Q8TD26 2715 aa12□□□□□ -0.49
PKP4-204ENST00000421462 UQCRQO14949 82 aa12□□□□□ -0.49
PKP4-204ENST00000421462 C14orf132Q9NPU4 83 aa12□□□□□ -0.49
PKP4-204ENST00000421462 ATP5G1P05496 136 aa11.99□□□□□ -0.49
PKP4-204ENST00000421462 PSMB8P28062 276 aa11.99□□□□□ -0.49
PKP4-204ENST00000421462 LY6DQ14210 128 aa11.99□□□□□ -0.49
PKP4-204ENST00000421462 RBMY1BA6NDE4 496 aaKnown RBP11.98□□□□□ -0.49
PKP4-204ENST00000421462 RBMY1EA6NEQ0 496 aaKnown RBP11.98□□□□□ -0.49
PKP4-204ENST00000421462 TIMM17BO60830 172 aa11.98□□□□□ -0.49
PKP4-204ENST00000421462 RBMY1DP0C7P1 496 aaKnown RBP11.98□□□□□ -0.49
PKP4-204ENST00000421462 KHDC1LQ5JSQ8 128 aa11.98□□□□□ -0.49
PKP4-204ENST00000421462 C9orf129Q5T035 196 aaKnown RBP11.98□□□□□ -0.49
PKP4-204ENST00000421462 UBE2E2Q96LR5 201 aa11.98□□□□□ -0.49
PKP4-204ENST00000421462 SONP18583 2426 aaKnown RBP11.98□□□□□ -0.49
PKP4-204ENST00000421462 MAPK1IP1LQ8NDC0 245 aa11.98□□□□□ -0.49
PKP4-204ENST00000421462 FBN2P35556 2912 aa11.98□□□□□ -0.49
PKP4-204ENST00000421462 MXRA5Q9NR99 2828 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 A0A087WVE0 104 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 SLURP1P55000 103 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 ZNF415Q09FC8 603 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 C18orf65Q6ZTR6 163 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 IMUPQ9GZP8 106 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 XCL2Q9UBD3 114 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 IGHV4-30-2A0A087WSY4 118 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 SMIM1B2RUZ4 78 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 DNAL4O96015 105 aa11.97□□□□□ -0.49
PKP4-204ENST00000421462 CYSTM1Q9H1C7 97 aa11.96□□□□□ -0.5
PKP4-204ENST00000421462 FLNCQ14315 2725 aa11.95□□□□□ -0.5
PKP4-204ENST00000421462 C22orf24Q9Y442 160 aa11.95□□□□□ -0.5
PKP4-204ENST00000421462 FAM208BQ5VWN6 2430 aa11.95□□□□□ -0.5
PKP4-204ENST00000421462 TRGV1A0A0A0MS02 117 aa11.95□□□□□ -0.5
PKP4-204ENST00000421462 MALP21145 153 aa11.95□□□□□ -0.5
PKP4-204ENST00000421462 ATP5J2P56134 94 aa11.95□□□□□ -0.5
PKP4-204ENST00000421462 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
PKP4-204ENST00000421462 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
PKP4-204ENST00000421462 LINC00526Q96FQ7 95 aa11.95□□□□□ -0.5
PKP4-204ENST00000421462 CRPP02741 224 aa11.94□□□□□ -0.5
PKP4-204ENST00000421462 SLPIP03973 132 aa11.94□□□□□ -0.5
PKP4-204ENST00000421462 EPG5Q9HCE0 2579 aa11.94□□□□□ -0.5
PKP4-204ENST00000421462 C11orf68Q9H3H3 251 aaKnown RBP11.94□□□□□ -0.5
PKP4-204ENST00000421462 PEMTQ9UBM1 199 aa11.94□□□□□ -0.5
PKP4-204ENST00000421462 CSDC2Q9Y534 153 aaKnown RBP11.94□□□□□ -0.5
PKP4-204ENST00000421462 A0A087WYN8 130 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 A0A1B0GX51 115 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 TRACP01848 142 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 BEAN1Q3B7T3 259 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 MIR7-3HGQ8N6C7 128 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 COX7CP15954 63 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 OR13C6PQ8NH95 151 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 ACACBO00763 2458 aa11.93□□□□□ -0.5
PKP4-204ENST00000421462 LINC00158P58513 81 aa11.92□□□□□ -0.5
PKP4-204ENST00000421462 FAM19A5Q7Z5A7 132 aaPredicted RBP11.92□□□□□ -0.5
PKP4-204ENST00000421462 MSMBP08118 114 aa11.92□□□□□ -0.5
PKP4-204ENST00000421462 INAFM2P0DMQ5 153 aa11.92□□□□□ -0.5
PKP4-204ENST00000421462 PFN2P35080 140 aa11.92□□□□□ -0.5
PKP4-204ENST00000421462 NIPBLQ6KC79 2804 aaeCLIP11.92□□□□□ -0.5
PKP4-204ENST00000421462 LINC00337Q8N6G1 96 aa11.92□□□□□ -0.5
PKP4-204ENST00000421462 IGLV5-39A0A0G2JS06 123 aa11.91□□□□□ -0.5
PKP4-204ENST00000421462 HIST2H2BCQ6DN03 193 aa11.91□□□□□ -0.5
PKP4-204ENST00000421462 NRGNQ92686 78 aa11.91□□□□□ -0.5
PKP4-204ENST00000421462 NCR3O14931 201 aa11.91□□□□□ -0.5
PKP4-204ENST00000421462 CCL19Q99731 98 aa11.91□□□□□ -0.5
PKP4-204ENST00000421462 SND1-IT1Q9HBX3 110 aa11.91□□□□□ -0.5
PKP4-204ENST00000421462 MYO18BQ8IUG5 2567 aa11.91□□□□□ -0.5
PKP4-204ENST00000421462 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.5
PKP4-204ENST00000421462 Q96MF0 132 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms