RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 DNAH11Q96DT5 4516 aa12.3□□□□□ -0.44
DDR1-233ENST00000421124 PKHD1P08F94 4074 aa12.29□□□□□ -0.44
DDR1-233ENST00000421124 IGKV3OR2-268A0A0C4DH90 116 aa12.29□□□□□ -0.44
DDR1-233ENST00000421124 LECT2O14960 151 aa12.29□□□□□ -0.44
DDR1-233ENST00000421124 DGAT2L7PQ6IED9 249 aa12.29□□□□□ -0.44
DDR1-233ENST00000421124 Q8N814 137 aa12.29□□□□□ -0.44
DDR1-233ENST00000421124 Q8N8P6 123 aa12.29□□□□□ -0.44
DDR1-233ENST00000421124 MRPL18Q9H0U6 180 aaKnown RBP12.29□□□□□ -0.44
DDR1-233ENST00000421124 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
DDR1-233ENST00000421124 CDPF1Q6NVV7 123 aa12.28□□□□□ -0.44
DDR1-233ENST00000421124 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
DDR1-233ENST00000421124 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
DDR1-233ENST00000421124 CDC42SE2Q9NRR3 84 aa12.28□□□□□ -0.44
DDR1-233ENST00000421124 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
DDR1-233ENST00000421124 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.45
DDR1-233ENST00000421124 FABP9Q0Z7S8 132 aa12.27□□□□□ -0.45
DDR1-233ENST00000421124 ZNF664Q8N3J9 261 aa12.27□□□□□ -0.45
DDR1-233ENST00000421124 NXT2Q9NPJ8 142 aaKnown RBP12.27□□□□□ -0.45
DDR1-233ENST00000421124 FUSP35637 526 aaKnown RBP eCLIP12.26□□□□□ -0.45
DDR1-233ENST00000421124 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
DDR1-233ENST00000421124 ALKBH7Q9BT30 221 aaPredicted RBP12.26□□□□□ -0.45
DDR1-233ENST00000421124 K7EMI3 77 aa12.25□□□□□ -0.45
DDR1-233ENST00000421124 YPEL4Q96NS1 127 aa12.25□□□□□ -0.45
DDR1-233ENST00000421124 SMCO4Q9NRQ5 59 aa12.25□□□□□ -0.45
DDR1-233ENST00000421124 TRAPPC1Q9Y5R8 145 aa12.25□□□□□ -0.45
DDR1-233ENST00000421124 IFI27P40305 119 aaPredicted RBP12.24□□□□□ -0.45
DDR1-233ENST00000421124 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
DDR1-233ENST00000421124 C14orf177Q52M58 125 aa12.23□□□□□ -0.45
DDR1-233ENST00000421124 ORMDL2Q53FV1 153 aa12.23□□□□□ -0.45
DDR1-233ENST00000421124 Q6ZUT4 128 aa12.23□□□□□ -0.45
DDR1-233ENST00000421124 CBLN2Q8IUK8 224 aa12.23□□□□□ -0.45
DDR1-233ENST00000421124 CHCHD10Q8WYQ3 142 aaPredicted RBP12.23□□□□□ -0.45
DDR1-233ENST00000421124 IGLV5-52A0A0A0MRZ9 124 aa12.22□□□□□ -0.45
DDR1-233ENST00000421124 LINC00959A0A1B0GUT2 108 aa12.22□□□□□ -0.45
DDR1-233ENST00000421124 GAGE12HA6NDE8 117 aa12.22□□□□□ -0.45
DDR1-233ENST00000421124 USP17L23D6RBM5 183 aa12.22□□□□□ -0.45
DDR1-233ENST00000421124 PRSS3P2Q8NHM4 247 aa12.22□□□□□ -0.45
DDR1-233ENST00000421124 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.45
DDR1-233ENST00000421124 SS18Q15532 418 aa12.21□□□□□ -0.45
DDR1-233ENST00000421124 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
DDR1-233ENST00000421124 DYNC1H1Q14204 4646 aaKnown RBP12.2□□□□□ -0.46
DDR1-233ENST00000421124 MRPS36P82909 103 aaKnown RBP12.2□□□□□ -0.46
DDR1-233ENST00000421124 CYSLTR1Q9Y271 337 aa12.2□□□□□ -0.46
DDR1-233ENST00000421124 PYGO1Q9Y3Y4 419 aa12.2□□□□□ -0.46
DDR1-233ENST00000421124 HERC2O95714 4834 aa12.2□□□□□ -0.46
DDR1-233ENST00000421124 CCL25O15444 150 aa12.19□□□□□ -0.46
DDR1-233ENST00000421124 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
DDR1-233ENST00000421124 GCSHP23434 173 aa12.18□□□□□ -0.46
DDR1-233ENST00000421124 G0S2P27469 103 aa12.18□□□□□ -0.46
DDR1-233ENST00000421124 XCL1P47992 114 aa12.18□□□□□ -0.46
DDR1-233ENST00000421124 FAM104AQ969W3 186 aa12.18□□□□□ -0.46
DDR1-233ENST00000421124 OPRPNQ99935 248 aaPredicted RBP12.18□□□□□ -0.46
DDR1-233ENST00000421124 C1orf196B1AJZ1 125 aa12.17□□□□□ -0.46
DDR1-233ENST00000421124 FOXI1Q12951 378 aa12.17□□□□□ -0.46
DDR1-233ENST00000421124 TRAV13-1A0A0B4J241 112 aa12.16□□□□□ -0.46
DDR1-233ENST00000421124 LINC01546A6NGU7 62 aa12.16□□□□□ -0.46
DDR1-233ENST00000421124 FA2HQ7L5A8 372 aa12.16□□□□□ -0.46
DDR1-233ENST00000421124 IGLV4-3A0A075B6K6 122 aa12.15□□□□□ -0.46
DDR1-233ENST00000421124 PRSS1P07477 247 aa12.15□□□□□ -0.46
DDR1-233ENST00000421124 CD164L2Q6UWJ8 174 aa12.15□□□□□ -0.46
DDR1-233ENST00000421124 C18orf32Q8TCD1 76 aa12.15□□□□□ -0.46
DDR1-233ENST00000421124 KRTAP10-1P60331 282 aa12.14□□□□□ -0.47
DDR1-233ENST00000421124 CFAP161Q6P656 301 aa12.14□□□□□ -0.47
DDR1-233ENST00000421124 TMEM141Q96I45 108 aa12.14□□□□□ -0.47
DDR1-233ENST00000421124 IFITM10A6NMD0 228 aa12.13□□□□□ -0.47
DDR1-233ENST00000421124 NPSP0C0P6 89 aa12.13□□□□□ -0.47
DDR1-233ENST00000421124 TOMM6Q96B49 74 aa12.13□□□□□ -0.47
DDR1-233ENST00000421124 DNAH5Q8TE73 4624 aa12.12□□□□□ -0.47
DDR1-233ENST00000421124 hDV102S1A0JD36 115 aa12.12□□□□□ -0.47
DDR1-233ENST00000421124 IGIPA6NJ69 53 aa12.12□□□□□ -0.47
DDR1-233ENST00000421124 Q6ZN92 141 aa12.12□□□□□ -0.47
DDR1-233ENST00000421124 C15orf56Q8N910 161 aa12.12□□□□□ -0.47
DDR1-233ENST00000421124 CDK2AP2O75956 126 aa12.11□□□□□ -0.47
DDR1-233ENST00000421124 TEX43Q6ZNM6 134 aa12.11□□□□□ -0.47
DDR1-233ENST00000421124 AP5S1Q9NUS5 200 aa12.11□□□□□ -0.47
DDR1-233ENST00000421124 LINC01549A6NIU2 74 aa12.1□□□□□ -0.47
DDR1-233ENST00000421124 TIMM17AQ99595 171 aa12.1□□□□□ -0.47
DDR1-233ENST00000421124 PCLOQ9Y6V0 5065 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 LRP1BQ9NZR2 4599 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 IGHV1-58A0A0C4DH39 117 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 COX7A2LO14548 114 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 LINC00614P0C842 121 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 PAPPA-AS1Q5QFB9 102 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 ERASQ7Z444 233 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 URB1-AS1Q96HZ7 61 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 SCGB3A1Q96QR1 104 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 C2orf88Q9BSF0 95 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 VCX2Q9H322 139 aa12.09□□□□□ -0.47
DDR1-233ENST00000421124 GVQW2A0A096LPI5 108 aaPredicted RBP12.08□□□□□ -0.48
DDR1-233ENST00000421124 COLCA2A8K830 154 aa12.08□□□□□ -0.48
DDR1-233ENST00000421124 RAB5BP61020 215 aa12.08□□□□□ -0.48
DDR1-233ENST00000421124 LINC01620Q4KN68 170 aa12.08□□□□□ -0.48
DDR1-233ENST00000421124 HIGD2BQ4VC39 106 aa12.08□□□□□ -0.48
DDR1-233ENST00000421124 LINC00173Q6ZV60 143 aa12.08□□□□□ -0.48
DDR1-233ENST00000421124 AMELXQ99217 191 aa12.08□□□□□ -0.48
DDR1-233ENST00000421124 TRGC2P03986 189 aa12.07□□□□□ -0.48
DDR1-233ENST00000421124 MALP21145 153 aa12.07□□□□□ -0.48
DDR1-233ENST00000421124 CNBPP62633 177 aaKnown RBP12.07□□□□□ -0.48
DDR1-233ENST00000421124 KIAA1109Q2LD37 5005 aa12.07□□□□□ -0.48
DDR1-233ENST00000421124 SCO1O75880 301 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms