RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TMEM263Q8WUH6 116 aaKnown RBP1.8□□□□□ -2.12
VPS41-206ENST00000418457 ITLN2Q8WWU7 325 aaPredicted RBP1.8□□□□□ -2.12
VPS41-206ENST00000418457 TMEM101Q96IK0 257 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 ODF3Q96PU9 254 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 TP53TG1Q9Y2A0 90 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 DSPP15924 2871 aaKnown RBP1.8□□□□□ -2.12
VPS41-206ENST00000418457 KALRNO60229 2985 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 CADP27708 2225 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 BSNQ9UPA5 3926 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 SETXQ7Z333 2677 aaKnown RBP1.79□□□□□ -2.12
VPS41-206ENST00000418457 GCN1Q92616 2671 aaKnown RBP1.79□□□□□ -2.12
VPS41-206ENST00000418457 ASH1LQ9NR48 2969 aaKnown RBP1.79□□□□□ -2.12
VPS41-206ENST00000418457 TRAV2A0A0B4J234 112 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 TRBV7-7A0A0K0K1E9 115 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 TMEM223A0PJW6 202 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 CLPSL1A2RUU4 121 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 LGALS9O00182 355 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 NDUFA4O00483 81 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 RS1O15537 224 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 TIMM17BO60830 172 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 CRYGDP07320 174 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 RNASE4P34096 147 aaKnown RBP1.79□□□□□ -2.12
VPS41-206ENST00000418457 UBE2E1P51965 193 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 UCNP55089 124 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 EGFEM1PQ0D2K5 195 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 FBXL19-AS1Q494R0 122 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 C6orf226Q5I0X4 101 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 C2orf82Q6UX34 121 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 VMO1Q7Z5L0 202 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 GPHB5Q86YW7 130 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 RNF182Q8N6D2 247 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 ZFAND2AQ8N6M9 145 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 Q8N9W7 124 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 C15orf53Q8NAA6 179 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 PTH2Q96A98 100 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 RPL39LQ96EH5 51 aaKnown RBP1.79□□□□□ -2.12
VPS41-206ENST00000418457 USMG5Q96IX5 58 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 FAM19A4Q96LR4 140 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 EDA2RQ9HAV5 297 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 SS18L2Q9UHA2 77 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 ICOSQ9Y6W8 199 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 ARFGEF3Q5TH69 2177 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 GPR179Q6PRD1 2367 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 ZDBF2Q9HCK1 2354 aa1.79□□□□□ -2.12
VPS41-206ENST00000418457 BAHCC1Q9P281 2608 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 CHD8Q9HCK8 2581 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 TRAV4A0A0B4J268 109 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 IGHV1-58A0A0C4DH39 117 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 TINCRA0A1B0GVN0 87 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 I3L3M4 83 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 LST1O00453 97 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 INAFM2P0DMQ5 153 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 RNASE3P12724 160 aaKnown RBP1.78□□□□□ -2.12
VPS41-206ENST00000418457 ZNF22P17026 224 aaPredicted RBP1.78□□□□□ -2.12
VPS41-206ENST00000418457 CXCL5P42830 114 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 ATP5J2P56134 94 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 TSPEAR-AS2P59090 65 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 LINC00315P59091 139 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 SEC61GP60059 68 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 CIRBPQ14011 172 aaKnown RBP1.78□□□□□ -2.12
VPS41-206ENST00000418457 MIAQ16674 131 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 MEIG1Q5JSS6 88 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 PRR9Q5T870 116 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 CLEC19AQ6UXS0 136 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 LINC00643Q86TS7 51 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 MUSTN1Q8IVN3 82 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 C20orf203Q8NBC4 194 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 ZNRF2Q8NHG8 242 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 NRGNQ92686 78 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 AMELXQ99217 191 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 TIMM21Q9BVV7 248 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 S4R3C0 116 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 CACNA1HO95180 2353 aa1.78□□□□□ -2.12
VPS41-206ENST00000418457 ATMQ13315 3056 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 CEP295Q9C0D2 2601 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 MAP1BP46821 2468 aaKnown RBP1.77□□□□□ -2.13
VPS41-206ENST00000418457 OTOGLQ3ZCN5 2332 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 ICE1Q9Y2F5 2266 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 SVILO95425 2214 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 TRAV41A0A0B4J266 112 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 TEX49A0A1B0GTD5 131 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 A0A1B0GX51 115 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 CCDC179H3BU77 68 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 K7EMT4 169 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 ATOX1O00244 68 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 COX7A2LO14548 114 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 UQCRQO14949 82 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 ZNF861PO60384 105 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 TRACP01848 142 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 IGHV3-30-3P0DP02 117 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 RPS28P62857 69 aaKnown RBP1.77□□□□□ -2.13
VPS41-206ENST00000418457 MRPS36P82909 103 aaKnown RBP1.77□□□□□ -2.13
VPS41-206ENST00000418457 ZNF56Q15929 161 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 FAM222AQ5U5X8 452 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 C11orf71Q6IPW1 123 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 SFTA2Q6UW10 78 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 TMEM61Q8N0U2 210 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 SMIM20Q8N5G0 67 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 C5orf56Q8N8D9 126 aa1.77□□□□□ -2.13
VPS41-206ENST00000418457 DAND5Q8N907 189 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms